RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 SRP68Q9UHB9 627 aaKnown RBP26.59■■□□□ 1.85
VPS36-204ENST00000480923 THUMPD2Q9BTF0 503 aaKnown RBP26.58■■□□□ 1.85
VPS36-204ENST00000480923 RIPK4P57078 832 aa26.57■■□□□ 1.84
VPS36-204ENST00000480923 USP42Q9H9J4 1324 aaKnown RBP26.57■■□□□ 1.84
VPS36-204ENST00000480923 MIS18AQ9NYP9 233 aa26.56■■□□□ 1.84
VPS36-204ENST00000480923 ADAMTS8Q9UP79 889 aa26.56■■□□□ 1.84
VPS36-204ENST00000480923 CD2APQ9Y5K6 639 aa26.56■■□□□ 1.84
VPS36-204ENST00000480923 COL15A1P39059 1388 aa26.56■■□□□ 1.84
VPS36-204ENST00000480923 ZPR1O75312 459 aa26.55■■□□□ 1.84
VPS36-204ENST00000480923 PNISRQ8TF01 805 aaKnown RBP26.55■■□□□ 1.84
VPS36-204ENST00000480923 TMPOP42166 694 aaKnown RBP26.54■■□□□ 1.84
VPS36-204ENST00000480923 RUNDC1Q96C34 613 aa26.54■■□□□ 1.84
VPS36-204ENST00000480923 C4AP0C0L4 1744 aa26.53■■□□□ 1.84
VPS36-204ENST00000480923 SNRPA1P09661 255 aaKnown RBP26.53■■□□□ 1.84
VPS36-204ENST00000480923 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
VPS36-204ENST00000480923 RRP7AQ9Y3A4 280 aaKnown RBP26.53■■□□□ 1.84
VPS36-204ENST00000480923 DLG5Q8TDM6 1919 aa26.53■■□□□ 1.84
VPS36-204ENST00000480923 LMOD3Q0VAK6 560 aa26.52■■□□□ 1.84
VPS36-204ENST00000480923 FKBP8Q14318 412 aa26.52■■□□□ 1.84
VPS36-204ENST00000480923 NEUROD2Q15784 382 aa26.52■■□□□ 1.84
VPS36-204ENST00000480923 GPR162Q16538 588 aa26.52■■□□□ 1.84
VPS36-204ENST00000480923 USPL1Q5W0Q7 1092 aa26.52■■□□□ 1.84
VPS36-204ENST00000480923 ZNF330Q9Y3S2 320 aaPredicted RBP26.52■■□□□ 1.84
VPS36-204ENST00000480923 PARP3Q9Y6F1 533 aa26.52■■□□□ 1.84
VPS36-204ENST00000480923 A1BGP04217 495 aa26.51■■□□□ 1.83
VPS36-204ENST00000480923 NARFQ9UHQ1 456 aa26.51■■□□□ 1.83
VPS36-204ENST00000480923 USP16Q9Y5T5 823 aa26.51■■□□□ 1.83
VPS36-204ENST00000480923 PRAMEF22A3QJZ6 481 aa26.5■■□□□ 1.83
VPS36-204ENST00000480923 ANP32CO43423 234 aa26.5■■□□□ 1.83
VPS36-204ENST00000480923 EIF5P55010 431 aaKnown RBP26.5■■□□□ 1.83
VPS36-204ENST00000480923 A0A087WZG4 1122 aa26.49■■□□□ 1.83
VPS36-204ENST00000480923 NPM2Q86SE8 214 aaKnown RBP26.49■■□□□ 1.83
VPS36-204ENST00000480923 IL6STP40189 918 aaPredicted RBP26.47■■□□□ 1.83
VPS36-204ENST00000480923 CCDC184Q52MB2 194 aa26.45■■□□□ 1.82
VPS36-204ENST00000480923 TSPYL4Q9UJ04 414 aa26.45■■□□□ 1.82
VPS36-204ENST00000480923 PIP4K2AP48426 406 aaPredicted RBP26.44■■□□□ 1.82
VPS36-204ENST00000480923 EIF4A1P60842 406 aaKnown RBP26.44■■□□□ 1.82
VPS36-204ENST00000480923 DDR1Q08345 913 aa26.44■■□□□ 1.82
VPS36-204ENST00000480923 BCL2L12Q9HB09 334 aa26.43■■□□□ 1.82
VPS36-204ENST00000480923 TBC1D2BQ9UPU7 963 aa26.43■■□□□ 1.82
VPS36-204ENST00000480923 YY1P25490 414 aa26.42■■□□□ 1.82
VPS36-204ENST00000480923 TM4SF1P30408 202 aa26.42■■□□□ 1.82
VPS36-204ENST00000480923 C10orf71Q711Q0 1435 aa26.41■■□□□ 1.82
VPS36-204ENST00000480923 KDM3BQ7LBC6 1761 aa26.41■■□□□ 1.82
VPS36-204ENST00000480923 POLRMTO00411 1230 aaKnown RBP26.41■■□□□ 1.82
VPS36-204ENST00000480923 GIGYF1O75420 1035 aaPredicted RBP26.41■■□□□ 1.82
VPS36-204ENST00000480923 NFIXQ14938 502 aa26.41■■□□□ 1.82
VPS36-204ENST00000480923 TRIM35Q9UPQ4 493 aa26.41■■□□□ 1.82
VPS36-204ENST00000480923 YBX3P16989 372 aaKnown RBP eCLIP26.4■■□□□ 1.82
VPS36-204ENST00000480923 WWC3Q9ULE0 1092 aa26.4■■□□□ 1.82
VPS36-204ENST00000480923 APAF1O14727 1248 aa26.39■■□□□ 1.82
VPS36-204ENST00000480923 MRS2Q9HD23 443 aa26.39■■□□□ 1.82
VPS36-204ENST00000480923 BABAM1Q9NWV8 329 aa26.39■■□□□ 1.82
VPS36-204ENST00000480923 TGFB2P61812 414 aa26.38■■□□□ 1.81
VPS36-204ENST00000480923 BICDL1Q6ZP65 573 aa26.38■■□□□ 1.81
VPS36-204ENST00000480923 DZIP3Q86Y13 1208 aaKnown RBP26.38■■□□□ 1.81
VPS36-204ENST00000480923 LAS1LQ9Y4W2 734 aaKnown RBP26.38■■□□□ 1.81
VPS36-204ENST00000480923 NBPF26B4DH59 902 aa26.37■■□□□ 1.81
VPS36-204ENST00000480923 NBPF10Q6P3W6 841 aaKnown RBP26.37■■□□□ 1.81
VPS36-204ENST00000480923 NBPF15Q8N660 670 aa26.37■■□□□ 1.81
VPS36-204ENST00000480923 GRIN3BO60391 1043 aa26.36■■□□□ 1.81
VPS36-204ENST00000480923 CAMTA2O94983 1202 aa26.36■■□□□ 1.81
VPS36-204ENST00000480923 PXDNLA1KZ92 1463 aa26.36■■□□□ 1.81
VPS36-204ENST00000480923 A0A0G2JLW4 131 aa26.35■■□□□ 1.81
VPS36-204ENST00000480923 TBC1D9BQ66K14 1250 aa26.35■■□□□ 1.81
VPS36-204ENST00000480923 SERPINB2P05120 415 aa26.34■■□□□ 1.81
VPS36-204ENST00000480923 DPEP1P16444 411 aa26.33■■□□□ 1.81
VPS36-204ENST00000480923 SCN7AQ01118 1682 aa26.33■■□□□ 1.81
VPS36-204ENST00000480923 LAMB4A4D0S4 1761 aa26.33■■□□□ 1.8
VPS36-204ENST00000480923 CHL1O00533 1208 aa26.32■■□□□ 1.8
VPS36-204ENST00000480923 KIF13BQ9NQT8 1826 aa26.31■■□□□ 1.8
VPS36-204ENST00000480923 NGEFQ8N5V2 710 aa26.31■■□□□ 1.8
VPS36-204ENST00000480923 ZNF652Q9Y2D9 606 aa26.3■■□□□ 1.8
VPS36-204ENST00000480923 MYL6BP14649 208 aa26.29■■□□□ 1.8
VPS36-204ENST00000480923 EIF2S2P20042 333 aaKnown RBP26.29■■□□□ 1.8
VPS36-204ENST00000480923 SETDB2Q96T68 719 aa26.29■■□□□ 1.8
VPS36-204ENST00000480923 CARMIL3Q8ND23 1372 aa26.29■■□□□ 1.8
VPS36-204ENST00000480923 BCS1LQ9Y276 419 aa26.28■■□□□ 1.8
VPS36-204ENST00000480923 CALD1Q05682 793 aaKnown RBP26.27■■□□□ 1.8
VPS36-204ENST00000480923 CLEC4GQ6UXB4 293 aa26.27■■□□□ 1.8
VPS36-204ENST00000480923 CFAP44Q96MT7 982 aa26.27■■□□□ 1.8
VPS36-204ENST00000480923 ERBB4Q15303 1308 aa26.27■■□□□ 1.8
VPS36-204ENST00000480923 KIAA1551Q9HCM1 1747 aa26.27■■□□□ 1.8
VPS36-204ENST00000480923 N4BP2Q86UW6 1770 aaPredicted RBP26.26■■□□□ 1.79
VPS36-204ENST00000480923 CHRNA5P30532 468 aa26.26■■□□□ 1.79
VPS36-204ENST00000480923 SENP3-EIF4A1A0A087X0R7 540 aa26.25■■□□□ 1.79
VPS36-204ENST00000480923 NPHP1O15259 732 aa26.25■■□□□ 1.79
VPS36-204ENST00000480923 KCNA3P22001 575 aa26.25■■□□□ 1.79
VPS36-204ENST00000480923 KRT24Q2M2I5 525 aa26.25■■□□□ 1.79
VPS36-204ENST00000480923 UTRNP46939 3433 aa26.25■■□□□ 1.79
VPS36-204ENST00000480923 BCORQ6W2J9 1755 aa26.25■■□□□ 1.79
VPS36-204ENST00000480923 KIF6Q6ZMV9 814 aa26.24■■□□□ 1.79
VPS36-204ENST00000480923 NECTIN2Q92692 538 aa26.24■■□□□ 1.79
VPS36-204ENST00000480923 PIM2Q9P1W9 311 aa26.24■■□□□ 1.79
VPS36-204ENST00000480923 GOLGB1Q14789 3259 aaKnown RBP26.24■■□□□ 1.79
VPS36-204ENST00000480923 NRXN2Q9P2S2 1712 aa26.23■■□□□ 1.79
VPS36-204ENST00000480923 MBIPQ9NS73 344 aa26.23■■□□□ 1.79
VPS36-204ENST00000480923 AFDNP55196 1824 aaKnown RBP26.23■■□□□ 1.79
VPS36-204ENST00000480923 RGL2O15211 777 aa26.22■■□□□ 1.79
VPS36-204ENST00000480923 GNAI1P63096 354 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms