RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SPECC1LQ69YQ0 1117 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 TOP1P11387 765 aaKnown RBP11.04□□□□□ -0.64
VEGFA-212ENST00000480614 MAP3K12Q12852 859 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 STX1AQ16623 288 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 PPP4R3BQ5MIZ7 849 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 SCLT1Q96NL6 688 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 NAPBQ9H115 298 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 CCDC172P0C7W6 258 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 DHX29Q7Z478 1369 aaKnown RBP11.04□□□□□ -0.64
VEGFA-212ENST00000480614 LARP1Q6PKG0 1096 aaKnown RBP11.04□□□□□ -0.64
VEGFA-212ENST00000480614 PLVAPQ9BX97 442 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 FERP16591 822 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 RAD54L2Q9Y4B4 1467 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 GNAT3A8MTJ3 354 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 SLC5A1P13866 664 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 NFE2L2Q16236 605 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 C8orf76Q96K31 380 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 POLR3DP05423 398 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-212ENST00000480614 CALCOCO1Q9P1Z2 691 aa11.04□□□□□ -0.64
VEGFA-212ENST00000480614 PPP1R1BQ9UD71 204 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-212ENST00000480614 DZIP1Q86YF9 867 aaKnown RBP11.04□□□□□ -0.64
VEGFA-212ENST00000480614 NKTRP30414 1462 aaKnown RBP11.03□□□□□ -0.64
VEGFA-212ENST00000480614 GOLIM4O00461 696 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 PABPN1LA6NDY0 278 aaKnown RBP11.03□□□□□ -0.64
VEGFA-212ENST00000480614 IFI16Q16666 785 aaKnown RBP11.03□□□□□ -0.64
VEGFA-212ENST00000480614 KANK3Q6NY19 840 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 IQCA1Q86XH1 822 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 TSR2Q969E8 191 aaKnown RBP11.03□□□□□ -0.64
VEGFA-212ENST00000480614 IFT140Q96RY7 1462 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 BACH2Q9BYV9 841 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 AMPD3Q01432 767 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 ZSCAN30Q86W11 494 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 CGNQ9P2M7 1197 aaKnown RBP11.03□□□□□ -0.64
VEGFA-212ENST00000480614 MKNK2Q9HBH9 465 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 MCM5P33992 734 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 ALDH1L2Q3SY69 923 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 AMOTQ4VCS5 1084 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 TSNARE1Q96NA8 513 aa11.03□□□□□ -0.64
VEGFA-212ENST00000480614 IDH1O75874 414 aaKnown RBP11.03□□□□□ -0.64
VEGFA-212ENST00000480614 C6orf163Q5TEZ5 329 aa11.02□□□□□ -0.64
VEGFA-212ENST00000480614 IGF1RP08069 1367 aa11.02□□□□□ -0.64
VEGFA-212ENST00000480614 RUSC2Q8N2Y8 1516 aa11.02□□□□□ -0.64
VEGFA-212ENST00000480614 CTNNA2P26232 953 aa11.02□□□□□ -0.64
VEGFA-212ENST00000480614 HYPKQ9NX55 129 aa11.02□□□□□ -0.64
VEGFA-212ENST00000480614 CTNNBL1Q8WYA6 563 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-212ENST00000480614 CFAP57Q96MR6 1250 aa11.02□□□□□ -0.65
VEGFA-212ENST00000480614 IKBKGQ9Y6K9 419 aa11.02□□□□□ -0.65
VEGFA-212ENST00000480614 MX1P20591 662 aa11.02□□□□□ -0.65
VEGFA-212ENST00000480614 TROQ12816 1431 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-212ENST00000480614 ACTN2P35609 894 aa11.02□□□□□ -0.65
VEGFA-212ENST00000480614 TMEM87AQ8NBN3 555 aa11.02□□□□□ -0.65
VEGFA-212ENST00000480614 NUP88Q99567 741 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-212ENST00000480614 CCDC178Q5BJE1 867 aa11.02□□□□□ -0.65
VEGFA-212ENST00000480614 SPTY2D1Q68D10 685 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-212ENST00000480614 HOMER2Q9NSB8 354 aa11.02□□□□□ -0.65
VEGFA-212ENST00000480614 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
VEGFA-212ENST00000480614 NSD3Q9BZ95 1437 aa11.02□□□□□ -0.65
VEGFA-212ENST00000480614 ERMNQ8TAM6 284 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 TTC12Q9H892 705 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-212ENST00000480614 CALML4Q96GE6 196 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 IQGAP2Q13576 1575 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 CCDC194A0A1B0GVG4 234 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 TRAF1Q13077 416 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 CABP1Q9NZU7 370 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 SLC12A7Q9Y666 1083 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 CEP112Q8N8E3 955 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 CCDC113Q9H0I3 377 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 KIF4BQ2VIQ3 1234 aa11.01□□□□□ -0.65
VEGFA-212ENST00000480614 BAG4O95429 457 aaKnown RBP11.01□□□□□ -0.65
VEGFA-212ENST00000480614 TTF1Q15361 905 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-212ENST00000480614 PRG4Q92954 1404 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-212ENST00000480614 USP37Q86T82 979 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 IFIT5Q13325 482 aaKnown RBP11□□□□□ -0.65
VEGFA-212ENST00000480614 DRC1Q96MC2 740 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 HMG20BQ9P0W2 317 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 COMMD10Q9Y6G5 202 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 SSRP1Q08945 709 aaKnown RBP11□□□□□ -0.65
VEGFA-212ENST00000480614 AKNAQ7Z591 1439 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 ANKIB1Q9P2G1 1089 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 GOLGA8BA8MQT2 603 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 CCDC96Q2M329 555 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 CFAP70Q5T0N1 1121 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 GOPCQ9HD26 462 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 TCP11L1Q9NUJ3 509 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 SSX2IPQ9Y2D8 614 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 SYCE3A1L190 88 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 PRPHP41219 470 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 BCAR3O75815 825 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 KIF4AO95239 1232 aa11□□□□□ -0.65
VEGFA-212ENST00000480614 PIBF1Q8WXW3 757 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 BMP15O95972 392 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 MTIF2P46199 727 aaKnown RBP10.99□□□□□ -0.65
VEGFA-212ENST00000480614 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.99□□□□□ -0.65
VEGFA-212ENST00000480614 GTPBP4Q9BZE4 634 aaKnown RBP10.99□□□□□ -0.65
VEGFA-212ENST00000480614 LIMCH1Q9UPQ0 1083 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 WDR97A6NE52 1622 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 LRPPRCP42704 1394 aaKnown RBP10.99□□□□□ -0.65
VEGFA-212ENST00000480614 CKAP4Q07065 602 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms