RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 MFAP1P55081 439 aaKnown RBP20.77■□□□□ 0.92
SH3D21-203ENST00000480549 C16orf71Q8IYS4 520 aaPredicted RBP20.77■□□□□ 0.92
SH3D21-203ENST00000480549 IFNL2Q8IZJ0 200 aa20.77■□□□□ 0.92
SH3D21-203ENST00000480549 ADCY9O60503 1353 aa20.77■□□□□ 0.92
SH3D21-203ENST00000480549 DBF4Q9UBU7 674 aaPredicted RBP20.77■□□□□ 0.91
SH3D21-203ENST00000480549 COL5A2P05997 1499 aaPredicted RBP20.76■□□□□ 0.91
SH3D21-203ENST00000480549 CYP27B1O15528 508 aa20.76■□□□□ 0.91
SH3D21-203ENST00000480549 GSPT1P15170 499 aaKnown RBP20.76■□□□□ 0.91
SH3D21-203ENST00000480549 WDR17Q8IZU2 1322 aa20.75■□□□□ 0.91
SH3D21-203ENST00000480549 SMARCA5O60264 1052 aaPredicted RBP20.75■□□□□ 0.91
SH3D21-203ENST00000480549 PRDM11Q9NQV5 511 aa20.75■□□□□ 0.91
SH3D21-203ENST00000480549 PI4KAP2A4QPH2 592 aa20.75■□□□□ 0.91
SH3D21-203ENST00000480549 ATP8B2P98198 1209 aa20.75■□□□□ 0.91
SH3D21-203ENST00000480549 PROSER3Q2NL68 480 aa20.75■□□□□ 0.91
SH3D21-203ENST00000480549 PI4KAP1Q8N8J0 262 aa20.75■□□□□ 0.91
SH3D21-203ENST00000480549 OTUD7AQ8TE49 926 aaPredicted RBP20.75■□□□□ 0.91
SH3D21-203ENST00000480549 C22orf23Q9BZE7 217 aa20.75■□□□□ 0.91
SH3D21-203ENST00000480549 LRRFIP2Q9Y608 721 aaKnown RBP20.75■□□□□ 0.91
SH3D21-203ENST00000480549 PNMA6EA0A0J9YXQ4 647 aa20.74■□□□□ 0.91
SH3D21-203ENST00000480549 BEND3Q5T5X7 828 aa20.74■□□□□ 0.91
SH3D21-203ENST00000480549 ZNF790Q6PG37 636 aa20.74■□□□□ 0.91
SH3D21-203ENST00000480549 DNAAF4Q8WXU2 420 aa20.74■□□□□ 0.91
SH3D21-203ENST00000480549 PANK2Q9BZ23 570 aa20.74■□□□□ 0.91
SH3D21-203ENST00000480549 SRCIN1Q9C0H9 1055 aa20.74■□□□□ 0.91
SH3D21-203ENST00000480549 XRCC6P12956 609 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■□□□ 11.7
SH3D21-203ENST00000480549 NFATC2IPQ8NCF5 419 aa20.73■□□□□ 0.91
SH3D21-203ENST00000480549 SLC39A6Q13433 755 aa20.73■□□□□ 0.91
SH3D21-203ENST00000480549 PDCL3Q9H2J4 239 aa20.73■□□□□ 0.91
SH3D21-203ENST00000480549 TTC22Q5TAA0 569 aa20.73■□□□□ 0.91
SH3D21-203ENST00000480549 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
SH3D21-203ENST00000480549 SHANK3Q9BYB0 1731 aa20.72■□□□□ 0.91
SH3D21-203ENST00000480549 APBB1O00213 710 aa20.72■□□□□ 0.91
SH3D21-203ENST00000480549 UBTFL1P0CB47 393 aaPredicted RBP20.72■□□□□ 0.91
SH3D21-203ENST00000480549 GLI3P10071 1580 aa20.71■□□□□ 0.91
SH3D21-203ENST00000480549 TBC1D9Q6ZT07 1266 aa20.71■□□□□ 0.91
SH3D21-203ENST00000480549 TUBGCP6Q96RT7 1819 aa20.71■□□□□ 0.91
SH3D21-203ENST00000480549 PDIA6Q15084 440 aa20.7■□□□□ 0.9
SH3D21-203ENST00000480549 BCL11BQ9C0K0 894 aaPredicted RBP20.7■□□□□ 0.9
SH3D21-203ENST00000480549 EXOC6BQ9Y2D4 811 aa20.7■□□□□ 0.9
SH3D21-203ENST00000480549 IBTKQ9P2D0 1353 aaPredicted RBP20.69■□□□□ 0.9
SH3D21-203ENST00000480549 NBPF7P0C2Y1 421 aaPredicted RBP20.69■□□□□ 0.9
SH3D21-203ENST00000480549 DDX21Q9NR30 783 aaKnown RBP eCLIP20.69■□□□□ 0.9
SH3D21-203ENST00000480549 HYPKQ9NX55 129 aa20.69■□□□□ 0.9
SH3D21-203ENST00000480549 HSP90AB1P08238 724 aaKnown RBP20.68■□□□□ 0.9
SH3D21-203ENST00000480549 RBM25P49756 843 aaKnown RBP20.68■□□□□ 0.9
SH3D21-203ENST00000480549 TOM1L2Q6ZVM7 507 aa20.68■□□□□ 0.9
SH3D21-203ENST00000480549 GOLGA6L3A6NEY3 463 aa20.68■□□□□ 0.9
SH3D21-203ENST00000480549 BECN1Q14457 450 aa20.68■□□□□ 0.9
SH3D21-203ENST00000480549 MAP3K2Q9Y2U5 619 aa20.68■□□□□ 0.9
SH3D21-203ENST00000480549 CDC45O75419 566 aa20.67■□□□□ 0.9
SH3D21-203ENST00000480549 KSR2Q6VAB6 950 aa20.67■□□□□ 0.9
SH3D21-203ENST00000480549 SSH3Q8TE77 659 aa20.67■□□□□ 0.9
SH3D21-203ENST00000480549 LAMB4A4D0S4 1761 aa20.67■□□□□ 0.9
SH3D21-203ENST00000480549 ZNF496Q96IT1 587 aaPredicted RBP20.67■□□□□ 0.9
SH3D21-203ENST00000480549 GZF1Q9H116 711 aaPredicted RBP20.67■□□□□ 0.9
SH3D21-203ENST00000480549 SALL3Q9BXA9 1300 aa20.67■□□□□ 0.9
SH3D21-203ENST00000480549 SLKQ9H2G2 1235 aaPredicted RBP20.66■□□□□ 0.9
SH3D21-203ENST00000480549 OSBPL3Q9H4L5 887 aa20.66■□□□□ 0.9
SH3D21-203ENST00000480549 POLA2Q14181 598 aa20.66■□□□□ 0.9
SH3D21-203ENST00000480549 TBC1D2Q9BYX2 928 aa20.65■□□□□ 0.9
SH3D21-203ENST00000480549 UBR2Q8IWV8 1755 aa20.65■□□□□ 0.9
SH3D21-203ENST00000480549 CARD10Q9BWT7 1032 aa20.65■□□□□ 0.9
SH3D21-203ENST00000480549 LRRCC1Q9C099 1032 aa20.65■□□□□ 0.9
SH3D21-203ENST00000480549 PCDH11XQ9BZA7 1347 aa20.65■□□□□ 0.9
SH3D21-203ENST00000480549 PCDH11YQ9BZA8 1340 aa20.65■□□□□ 0.9
SH3D21-203ENST00000480549 PAPPAQ13219 1627 aa20.64■□□□□ 0.89
SH3D21-203ENST00000480549 PPP1R42Q7Z4L9 355 aa20.64■□□□□ 0.89
SH3D21-203ENST00000480549 ZCRB1Q8TBF4 217 aaKnown RBP20.64■□□□□ 0.89
SH3D21-203ENST00000480549 ALDH1L1O75891 902 aa20.64■□□□□ 0.89
SH3D21-203ENST00000480549 ROBO1Q9Y6N7 1651 aa20.63■□□□□ 0.89
SH3D21-203ENST00000480549 PDE1AP54750 535 aa20.63■□□□□ 0.89
SH3D21-203ENST00000480549 SDSP20132 328 aa20.63■□□□□ 0.89
SH3D21-203ENST00000480549 CABP4P57796 275 aa20.63■□□□□ 0.89
SH3D21-203ENST00000480549 LARP1Q6PKG0 1096 aaKnown RBP20.62■□□□□ 0.89
SH3D21-203ENST00000480549 TTC5Q8N0Z6 440 aa20.62■□□□□ 0.89
SH3D21-203ENST00000480549 LRP10Q7Z4F1 713 aa20.62■□□□□ 0.89
SH3D21-203ENST00000480549 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
SH3D21-203ENST00000480549 IL2RBP14784 551 aa20.61■□□□□ 0.89
SH3D21-203ENST00000480549 FMNL2Q96PY5 1086 aa20.61■□□□□ 0.89
SH3D21-203ENST00000480549 USP16Q9Y5T5 823 aa20.61■□□□□ 0.89
SH3D21-203ENST00000480549 TPM2P07951 284 aa20.6■□□□□ 0.89
SH3D21-203ENST00000480549 CWF19L2Q2TBE0 894 aaKnown RBP20.6■□□□□ 0.89
SH3D21-203ENST00000480549 TOGARAM1Q9Y4F4 1720 aa20.6■□□□□ 0.89
SH3D21-203ENST00000480549 DDX58O95786 925 aaKnown RBP20.6■□□□□ 0.89
SH3D21-203ENST00000480549 NKX1-1Q15270 411 aaPredicted RBP20.6■□□□□ 0.89
SH3D21-203ENST00000480549 STRN4Q9NRL3 753 aa20.6■□□□□ 0.89
SH3D21-203ENST00000480549 ESPNB1AK53 854 aa20.6■□□□□ 0.89
SH3D21-203ENST00000480549 PDIA4P13667 645 aaKnown RBP20.6■□□□□ 0.89
SH3D21-203ENST00000480549 AIMP1Q12904 312 aaKnown RBP20.6■□□□□ 0.89
SH3D21-203ENST00000480549 LINS1Q8NG48 757 aa20.6■□□□□ 0.89
SH3D21-203ENST00000480549 KIF2CQ99661 725 aa20.6■□□□□ 0.89
SH3D21-203ENST00000480549 SRGAP3O43295 1099 aa20.59■□□□□ 0.89
SH3D21-203ENST00000480549 AHDC1Q5TGY3 1603 aaPredicted RBP20.59■□□□□ 0.89
SH3D21-203ENST00000480549 COL22A1Q8NFW1 1626 aaPredicted RBP20.59■□□□□ 0.89
SH3D21-203ENST00000480549 MYL6BP14649 208 aa20.59■□□□□ 0.89
SH3D21-203ENST00000480549 MTX1Q13505 466 aa20.59■□□□□ 0.89
SH3D21-203ENST00000480549 UTYO14607 1347 aa20.58■□□□□ 0.89
SH3D21-203ENST00000480549 ARFGEF2Q9Y6D5 1785 aa20.58■□□□□ 0.89
SH3D21-203ENST00000480549 KCPQ6ZWJ8 1503 aa20.58■□□□□ 0.89
SH3D21-203ENST00000480549 COL14A1Q05707 1796 aaKnown RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms