RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 YBX3P16989 372 aaKnown RBP eCLIP19.92■□□□□ 0.78
TDP2-205ENST00000480495 COL15A1P39059 1388 aa19.92■□□□□ 0.78
TDP2-205ENST00000480495 FKBP8Q14318 412 aa19.91■□□□□ 0.78
TDP2-205ENST00000480495 NARFQ9UHQ1 456 aa19.91■□□□□ 0.78
TDP2-205ENST00000480495 CANXP27824 592 aaKnown RBP19.9■□□□□ 0.78
TDP2-205ENST00000480495 TGFB2P61812 414 aa19.9■□□□□ 0.78
TDP2-205ENST00000480495 DCTN1Q14203 1278 aa19.9■□□□□ 0.78
TDP2-205ENST00000480495 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
TDP2-205ENST00000480495 MAPK8IP3Q9UPT6 1336 aa19.9■□□□□ 0.78
TDP2-205ENST00000480495 KCNQ3O43525 872 aa19.89■□□□□ 0.77
TDP2-205ENST00000480495 TAF7Q15545 349 aaPredicted RBP19.89■□□□□ 0.77
TDP2-205ENST00000480495 USPL1Q5W0Q7 1092 aa19.89■□□□□ 0.77
TDP2-205ENST00000480495 C10orf71Q711Q0 1435 aa19.89■□□□□ 0.77
TDP2-205ENST00000480495 A0A087WZG4 1122 aa19.88■□□□□ 0.77
TDP2-205ENST00000480495 EIF5P55010 431 aaKnown RBP19.88■□□□□ 0.77
TDP2-205ENST00000480495 CHD4Q14839 1912 aa19.87■□□□□ 0.77
TDP2-205ENST00000480495 TM4SF1P30408 202 aa19.87■□□□□ 0.77
TDP2-205ENST00000480495 IL6STP40189 918 aaPredicted RBP19.86■□□□□ 0.77
TDP2-205ENST00000480495 DDR1Q08345 913 aa19.86■□□□□ 0.77
TDP2-205ENST00000480495 PNISRQ8TF01 805 aaKnown RBP19.86■□□□□ 0.77
TDP2-205ENST00000480495 PXDNLA1KZ92 1463 aa19.86■□□□□ 0.77
TDP2-205ENST00000480495 POLRMTO00411 1230 aaKnown RBP19.85■□□□□ 0.77
TDP2-205ENST00000480495 SNRPA1P09661 255 aaKnown RBP19.85■□□□□ 0.77
TDP2-205ENST00000480495 KIF13BQ9NQT8 1826 aa19.85■□□□□ 0.77
TDP2-205ENST00000480495 UTRNP46939 3433 aa19.85■□□□□ 0.77
TDP2-205ENST00000480495 NPM2Q86SE8 214 aaKnown RBP19.84■□□□□ 0.77
TDP2-205ENST00000480495 ZNF784Q8NCA9 323 aaPredicted RBP19.84■□□□□ 0.77
TDP2-205ENST00000480495 PRKRIP1Q9H875 184 aaPredicted RBP19.84■□□□□ 0.77
TDP2-205ENST00000480495 A1BGP04217 495 aa19.83■□□□□ 0.77
TDP2-205ENST00000480495 BCL2L12Q9HB09 334 aa19.83■□□□□ 0.77
TDP2-205ENST00000480495 USP16Q9Y5T5 823 aa19.83■□□□□ 0.77
TDP2-205ENST00000480495 A0A0G2JLW4 131 aa19.82■□□□□ 0.76
TDP2-205ENST00000480495 NFIXQ14938 502 aa19.82■□□□□ 0.76
TDP2-205ENST00000480495 DPEP1P16444 411 aa19.81■□□□□ 0.76
TDP2-205ENST00000480495 ZNF330Q9Y3S2 320 aaPredicted RBP19.81■□□□□ 0.76
TDP2-205ENST00000480495 WDR43Q15061 677 aaKnown RBP eCLIP19.8■□□□□ 0.76
TDP2-205ENST00000480495 MIS18AQ9NYP9 233 aa19.8■□□□□ 0.76
TDP2-205ENST00000480495 WWC3Q9ULE0 1092 aa19.8■□□□□ 0.76
TDP2-205ENST00000480495 GOLGB1Q14789 3259 aaKnown RBP19.79■□□□□ 0.76
TDP2-205ENST00000480495 DLG5Q8TDM6 1919 aa19.79■□□□□ 0.76
TDP2-205ENST00000480495 PRAMEF22A3QJZ6 481 aa19.79■□□□□ 0.76
TDP2-205ENST00000480495 RIPK4P57078 832 aa19.79■□□□□ 0.76
TDP2-205ENST00000480495 LMOD3Q0VAK6 560 aa19.79■□□□□ 0.76
TDP2-205ENST00000480495 TBC1D2BQ9UPU7 963 aa19.79■□□□□ 0.76
TDP2-205ENST00000480495 KIAA1551Q9HCM1 1747 aa19.79■□□□□ 0.76
TDP2-205ENST00000480495 SERPINB2P05120 415 aa19.78■□□□□ 0.76
TDP2-205ENST00000480495 TMPOP42166 694 aaKnown RBP19.78■□□□□ 0.76
TDP2-205ENST00000480495 THUMPD2Q9BTF0 503 aaKnown RBP19.78■□□□□ 0.76
TDP2-205ENST00000480495 KCNA3P22001 575 aa19.77■□□□□ 0.76
TDP2-205ENST00000480495 RUNDC1Q96C34 613 aa19.77■□□□□ 0.76
TDP2-205ENST00000480495 PIM2Q9P1W9 311 aa19.77■□□□□ 0.76
TDP2-205ENST00000480495 BCS1LQ9Y276 419 aa19.77■□□□□ 0.76
TDP2-205ENST00000480495 N4BP2Q86UW6 1770 aaPredicted RBP19.76■□□□□ 0.75
TDP2-205ENST00000480495 CAMTA2O94983 1202 aa19.76■□□□□ 0.75
TDP2-205ENST00000480495 EIF4A1P60842 406 aaKnown RBP19.76■□□□□ 0.75
TDP2-205ENST00000480495 DZIP3Q86Y13 1208 aaKnown RBP19.76■□□□□ 0.75
TDP2-205ENST00000480495 GIGYF1O75420 1035 aaPredicted RBP19.75■□□□□ 0.75
TDP2-205ENST00000480495 TBC1D9BQ66K14 1250 aa19.75■□□□□ 0.75
TDP2-205ENST00000480495 BICDL1Q6ZP65 573 aa19.75■□□□□ 0.75
TDP2-205ENST00000480495 BABAM1Q9NWV8 329 aa19.75■□□□□ 0.75
TDP2-205ENST00000480495 SCN7AQ01118 1682 aa19.75■□□□□ 0.75
TDP2-205ENST00000480495 PIP4K2AP48426 406 aaPredicted RBP19.74■□□□□ 0.75
TDP2-205ENST00000480495 CLEC4GQ6UXB4 293 aa19.74■□□□□ 0.75
TDP2-205ENST00000480495 CCDC146Q8IYE0 955 aa19.74■□□□□ 0.75
TDP2-205ENST00000480495 ADAMTS8Q9UP79 889 aa19.74■□□□□ 0.75
TDP2-205ENST00000480495 KDM3BQ7LBC6 1761 aa19.74■□□□□ 0.75
TDP2-205ENST00000480495 NRXN2Q9P2S2 1712 aa19.73■□□□□ 0.75
TDP2-205ENST00000480495 CARMIL3Q8ND23 1372 aa19.73■□□□□ 0.75
TDP2-205ENST00000480495 NBPF26B4DH59 902 aa19.73■□□□□ 0.75
TDP2-205ENST00000480495 RGL2O15211 777 aa19.73■□□□□ 0.75
TDP2-205ENST00000480495 DALRD3Q5D0E6 543 aaKnown RBP19.73■□□□□ 0.75
TDP2-205ENST00000480495 NBPF10Q6P3W6 841 aaKnown RBP19.73■□□□□ 0.75
TDP2-205ENST00000480495 NBPF15Q8N660 670 aa19.73■□□□□ 0.75
TDP2-205ENST00000480495 SETDB2Q96T68 719 aa19.73■□□□□ 0.75
TDP2-205ENST00000480495 TSPYL4Q9UJ04 414 aa19.73■□□□□ 0.75
TDP2-205ENST00000480495 ZNF652Q9Y2D9 606 aa19.73■□□□□ 0.75
TDP2-205ENST00000480495 CHRNA5P30532 468 aa19.72■□□□□ 0.75
TDP2-205ENST00000480495 RRP7AQ9Y3A4 280 aaKnown RBP19.71■□□□□ 0.75
TDP2-205ENST00000480495 AFDNP55196 1824 aaKnown RBP19.71■□□□□ 0.75
TDP2-205ENST00000480495 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
TDP2-205ENST00000480495 NEUROD2Q15784 382 aa19.7■□□□□ 0.74
TDP2-205ENST00000480495 ARHGAP27Q6ZUM4 889 aa19.7■□□□□ 0.74
TDP2-205ENST00000480495 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
TDP2-205ENST00000480495 ADCY9O60503 1353 aa19.7■□□□□ 0.74
TDP2-205ENST00000480495 BRCA1P38398 1863 aaKnown RBP19.69■□□□□ 0.74
TDP2-205ENST00000480495 BRIP1Q9BX63 1249 aa19.69■□□□□ 0.74
TDP2-205ENST00000480495 LAMB4A4D0S4 1761 aa19.69■□□□□ 0.74
TDP2-205ENST00000480495 BCORQ6W2J9 1755 aa19.68■□□□□ 0.74
TDP2-205ENST00000480495 H0YIN7 160 aa19.68■□□□□ 0.74
TDP2-205ENST00000480495 PDE6BP35913 854 aa19.68■□□□□ 0.74
TDP2-205ENST00000480495 PRR5LQ6MZQ0 368 aa19.68■□□□□ 0.74
TDP2-205ENST00000480495 C2CD5Q86YS7 1000 aa19.68■□□□□ 0.74
TDP2-205ENST00000480495 TRIM35Q9UPQ4 493 aa19.68■□□□□ 0.74
TDP2-205ENST00000480495 ERBB4Q15303 1308 aa19.68■□□□□ 0.74
TDP2-205ENST00000480495 ATP10DQ9P241 1426 aa19.68■□□□□ 0.74
TDP2-205ENST00000480495 NPHP1O15259 732 aa19.67■□□□□ 0.74
TDP2-205ENST00000480495 CNBD1Q8NA66 436 aa19.67■□□□□ 0.74
TDP2-205ENST00000480495 ARFGEF1Q9Y6D6 1849 aa19.65■□□□□ 0.74
TDP2-205ENST00000480495 ERVV-1B6SEH8 477 aa19.65■□□□□ 0.74
TDP2-205ENST00000480495 CHL1O00533 1208 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms