RNA–Protein interactions for RNA: ENST00000480185.1

MMP11-209, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 370 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-209ENST00000480185 PARP3Q9Y6F1 533 aa17.73■□□□□ 0.43
MMP11-209ENST00000480185 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
MMP11-209ENST00000480185 COL15A1P39059 1388 aa17.72■□□□□ 0.43
MMP11-209ENST00000480185 KCNQ3O43525 872 aa17.72■□□□□ 0.43
MMP11-209ENST00000480185 FKBP8Q14318 412 aa17.72■□□□□ 0.43
MMP11-209ENST00000480185 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
MMP11-209ENST00000480185 NARFQ9UHQ1 456 aa17.72■□□□□ 0.43
MMP11-209ENST00000480185 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
MMP11-209ENST00000480185 USPL1Q5W0Q7 1092 aa17.71■□□□□ 0.43
MMP11-209ENST00000480185 C4AP0C0L4 1744 aa17.71■□□□□ 0.43
MMP11-209ENST00000480185 MAPK8IP3Q9UPT6 1336 aa17.71■□□□□ 0.42
MMP11-209ENST00000480185 CANXP27824 592 aaKnown RBP17.7■□□□□ 0.42
MMP11-209ENST00000480185 EIF5P55010 431 aaKnown RBP17.7■□□□□ 0.42
MMP11-209ENST00000480185 TAF7Q15545 349 aaPredicted RBP17.7■□□□□ 0.42
MMP11-209ENST00000480185 C10orf71Q711Q0 1435 aa17.7■□□□□ 0.42
MMP11-209ENST00000480185 A0A087WZG4 1122 aa17.69■□□□□ 0.42
MMP11-209ENST00000480185 TGFB2P61812 414 aa17.69■□□□□ 0.42
MMP11-209ENST00000480185 DDR1Q08345 913 aa17.69■□□□□ 0.42
MMP11-209ENST00000480185 TM4SF1P30408 202 aa17.68■□□□□ 0.42
MMP11-209ENST00000480185 IL6STP40189 918 aaPredicted RBP17.68■□□□□ 0.42
MMP11-209ENST00000480185 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
MMP11-209ENST00000480185 SNRPA1P09661 255 aaKnown RBP17.67■□□□□ 0.42
MMP11-209ENST00000480185 PXDNLA1KZ92 1463 aa17.67■□□□□ 0.42
MMP11-209ENST00000480185 POLRMTO00411 1230 aaKnown RBP17.66■□□□□ 0.42
MMP11-209ENST00000480185 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
MMP11-209ENST00000480185 BCL2L12Q9HB09 334 aa17.66■□□□□ 0.42
MMP11-209ENST00000480185 A1BGP04217 495 aa17.65■□□□□ 0.42
MMP11-209ENST00000480185 NFIXQ14938 502 aa17.65■□□□□ 0.42
MMP11-209ENST00000480185 MIS18AQ9NYP9 233 aa17.65■□□□□ 0.42
MMP11-209ENST00000480185 USP16Q9Y5T5 823 aa17.65■□□□□ 0.42
MMP11-209ENST00000480185 A0A0G2JLW4 131 aa17.64■□□□□ 0.41
MMP11-209ENST00000480185 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.41
MMP11-209ENST00000480185 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
MMP11-209ENST00000480185 ZNF784Q8NCA9 323 aaPredicted RBP17.64■□□□□ 0.41
MMP11-209ENST00000480185 THUMPD2Q9BTF0 503 aaKnown RBP17.64■□□□□ 0.41
MMP11-209ENST00000480185 WWC3Q9ULE0 1092 aa17.64■□□□□ 0.41
MMP11-209ENST00000480185 ZNF330Q9Y3S2 320 aaPredicted RBP17.64■□□□□ 0.41
MMP11-209ENST00000480185 PRAMEF22A3QJZ6 481 aa17.63■□□□□ 0.41
MMP11-209ENST00000480185 DPEP1P16444 411 aa17.63■□□□□ 0.41
MMP11-209ENST00000480185 RIPK4P57078 832 aa17.63■□□□□ 0.41
MMP11-209ENST00000480185 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
MMP11-209ENST00000480185 TBC1D2BQ9UPU7 963 aa17.62■□□□□ 0.41
MMP11-209ENST00000480185 KIF13BQ9NQT8 1826 aa17.62■□□□□ 0.41
MMP11-209ENST00000480185 LMOD3Q0VAK6 560 aa17.61■□□□□ 0.41
MMP11-209ENST00000480185 SERPINB2P05120 415 aa17.6■□□□□ 0.41
MMP11-209ENST00000480185 KCNA3P22001 575 aa17.6■□□□□ 0.41
MMP11-209ENST00000480185 EIF4A1P60842 406 aaKnown RBP17.6■□□□□ 0.41
MMP11-209ENST00000480185 RUNDC1Q96C34 613 aa17.6■□□□□ 0.41
MMP11-209ENST00000480185 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
MMP11-209ENST00000480185 CHD4Q14839 1912 aa17.6■□□□□ 0.41
MMP11-209ENST00000480185 NBPF26B4DH59 902 aa17.59■□□□□ 0.41
MMP11-209ENST00000480185 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
MMP11-209ENST00000480185 CAMTA2O94983 1202 aa17.59■□□□□ 0.41
MMP11-209ENST00000480185 PIP4K2AP48426 406 aaPredicted RBP17.59■□□□□ 0.41
MMP11-209ENST00000480185 NBPF10Q6P3W6 841 aaKnown RBP17.59■□□□□ 0.41
MMP11-209ENST00000480185 DZIP3Q86Y13 1208 aaKnown RBP17.59■□□□□ 0.41
MMP11-209ENST00000480185 CCDC146Q8IYE0 955 aa17.59■□□□□ 0.41
MMP11-209ENST00000480185 NBPF15Q8N660 670 aa17.59■□□□□ 0.41
MMP11-209ENST00000480185 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
MMP11-209ENST00000480185 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.41
MMP11-209ENST00000480185 TBC1D9BQ66K14 1250 aa17.58■□□□□ 0.4
MMP11-209ENST00000480185 BICDL1Q6ZP65 573 aa17.58■□□□□ 0.4
MMP11-209ENST00000480185 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
MMP11-209ENST00000480185 PIM2Q9P1W9 311 aa17.58■□□□□ 0.4
MMP11-209ENST00000480185 RRP7AQ9Y3A4 280 aaKnown RBP17.57■□□□□ 0.4
MMP11-209ENST00000480185 DLG5Q8TDM6 1919 aa17.57■□□□□ 0.4
MMP11-209ENST00000480185 CARMIL3Q8ND23 1372 aa17.56■□□□□ 0.4
MMP11-209ENST00000480185 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
MMP11-209ENST00000480185 RGL2O15211 777 aa17.56■□□□□ 0.4
MMP11-209ENST00000480185 CHRNA5P30532 468 aa17.56■□□□□ 0.4
MMP11-209ENST00000480185 CLEC4GQ6UXB4 293 aa17.56■□□□□ 0.4
MMP11-209ENST00000480185 TSPYL4Q9UJ04 414 aa17.56■□□□□ 0.4
MMP11-209ENST00000480185 SCN7AQ01118 1682 aa17.55■□□□□ 0.4
MMP11-209ENST00000480185 NEUROD2Q15784 382 aa17.55■□□□□ 0.4
MMP11-209ENST00000480185 DALRD3Q5D0E6 543 aaKnown RBP17.55■□□□□ 0.4
MMP11-209ENST00000480185 SETDB2Q96T68 719 aa17.55■□□□□ 0.4
MMP11-209ENST00000480185 KDM3BQ7LBC6 1761 aa17.54■□□□□ 0.4
MMP11-209ENST00000480185 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
MMP11-209ENST00000480185 ZNF652Q9Y2D9 606 aa17.54■□□□□ 0.4
MMP11-209ENST00000480185 NRXN2Q9P2S2 1712 aa17.54■□□□□ 0.4
MMP11-209ENST00000480185 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
MMP11-209ENST00000480185 PRR5LQ6MZQ0 368 aa17.53■□□□□ 0.4
MMP11-209ENST00000480185 ADCY9O60503 1353 aa17.53■□□□□ 0.4
MMP11-209ENST00000480185 ARHGAP27Q6ZUM4 889 aa17.52■□□□□ 0.4
MMP11-209ENST00000480185 BRIP1Q9BX63 1249 aa17.52■□□□□ 0.4
MMP11-209ENST00000480185 ERBB4Q15303 1308 aa17.51■□□□□ 0.39
MMP11-209ENST00000480185 H0YIN7 160 aa17.51■□□□□ 0.39
MMP11-209ENST00000480185 CHL1O00533 1208 aa17.51■□□□□ 0.39
MMP11-209ENST00000480185 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
MMP11-209ENST00000480185 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
MMP11-209ENST00000480185 ATP10DQ9P241 1426 aa17.5■□□□□ 0.39
MMP11-209ENST00000480185 PDE6BP35913 854 aa17.5■□□□□ 0.39
MMP11-209ENST00000480185 C2CD5Q86YS7 1000 aa17.5■□□□□ 0.39
MMP11-209ENST00000480185 LAMB4A4D0S4 1761 aa17.49■□□□□ 0.39
MMP11-209ENST00000480185 ERVV-1B6SEH8 477 aa17.49■□□□□ 0.39
MMP11-209ENST00000480185 NPHP1O15259 732 aa17.49■□□□□ 0.39
MMP11-209ENST00000480185 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
MMP11-209ENST00000480185 BRCA1P38398 1863 aaKnown RBP17.48■□□□□ 0.39
MMP11-209ENST00000480185 MYL6BP14649 208 aa17.48■□□□□ 0.39
MMP11-209ENST00000480185 ST5P78524 1137 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms