RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 ACSBG1Q96GR2 724 aa7.54□□□□□ -1.2
CAPN9-204ENST00000480004 LRRC4BQ9NT99 713 aa7.54□□□□□ -1.2
CAPN9-204ENST00000480004 UTRNP46939 3433 aa7.54□□□□□ -1.2
CAPN9-204ENST00000480004 CEP350Q5VT06 3117 aa7.54□□□□□ -1.2
CAPN9-204ENST00000480004 PNPLA7Q6ZV29 1317 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 PAPPAQ13219 1627 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 COL24A1Q17RW2 1714 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 QSER1Q2KHR3 1735 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 POTEB2H3BUK9 544 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 NUDT7P0C024 238 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 MS4A1P11836 297 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 ARSIQ5FYB1 569 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 MAMSTRQ6ZN01 415 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 ZNF454Q8N9F8 522 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 TTC13Q8NBP0 860 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 REPIN1Q9BWE0 567 aaKnown RBP7.53□□□□□ -1.2
CAPN9-204ENST00000480004 ADGRB1O14514 1584 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 NHSQ6T4R5 1651 aa7.53□□□□□ -1.2
CAPN9-204ENST00000480004 TNS2Q63HR2 1409 aa7.52□□□□□ -1.2
CAPN9-204ENST00000480004 OATP04181 439 aa7.52□□□□□ -1.21
CAPN9-204ENST00000480004 PHOX2BQ99453 314 aa7.52□□□□□ -1.21
CAPN9-204ENST00000480004 GPCPD1Q9NPB8 672 aa7.52□□□□□ -1.21
CAPN9-204ENST00000480004 SCUBE2Q9NQ36 999 aa7.52□□□□□ -1.21
CAPN9-204ENST00000480004 AXIN2Q9Y2T1 843 aa7.52□□□□□ -1.21
CAPN9-204ENST00000480004 WNK3Q9BYP7 1800 aa7.52□□□□□ -1.21
CAPN9-204ENST00000480004 PADI6Q6TGC4 694 aa7.51□□□□□ -1.21
CAPN9-204ENST00000480004 METTL3Q86U44 580 aaKnown RBP7.51□□□□□ -1.21
CAPN9-204ENST00000480004 ARHGEF25Q86VW2 580 aa7.51□□□□□ -1.21
CAPN9-204ENST00000480004 C16orf71Q8IYS4 520 aaPredicted RBP7.51□□□□□ -1.21
CAPN9-204ENST00000480004 FLAD1Q8NFF5 587 aa7.51□□□□□ -1.21
CAPN9-204ENST00000480004 RBM46Q8TBY0 533 aaKnown RBP7.51□□□□□ -1.21
CAPN9-204ENST00000480004 KHSRPQ92945 711 aaKnown RBP eCLIP7.51□□□□□ -1.21
CAPN9-204ENST00000480004 ADAM33Q9BZ11 813 aa7.51□□□□□ -1.21
CAPN9-204ENST00000480004 WWC3Q9ULE0 1092 aa7.51□□□□□ -1.21
CAPN9-204ENST00000480004 ADGRG1Q9Y653 693 aa7.51□□□□□ -1.21
CAPN9-204ENST00000480004 IL2RBP14784 551 aa7.5□□□□□ -1.21
CAPN9-204ENST00000480004 SRPK2P78362 688 aaKnown RBP7.5□□□□□ -1.21
CAPN9-204ENST00000480004 MDM2Q00987 491 aaPredicted RBP7.5□□□□□ -1.21
CAPN9-204ENST00000480004 FSTL1Q12841 308 aa7.5□□□□□ -1.21
CAPN9-204ENST00000480004 PXYLP1Q8TE99 480 aa7.5□□□□□ -1.21
CAPN9-204ENST00000480004 PPIP5K1Q6PFW1 1433 aa7.5□□□□□ -1.21
CAPN9-204ENST00000480004 SLIT3O75094 1523 aa7.49□□□□□ -1.21
CAPN9-204ENST00000480004 COL23A1Q86Y22 540 aaPredicted RBP7.49□□□□□ -1.21
CAPN9-204ENST00000480004 BTAF1O14981 1849 aa7.49□□□□□ -1.21
CAPN9-204ENST00000480004 CPSF1Q10570 1443 aaKnown RBP7.49□□□□□ -1.21
CAPN9-204ENST00000480004 COL18A1P39060 1754 aa7.48□□□□□ -1.21
CAPN9-204ENST00000480004 KAT6BQ8WYB5 2073 aa7.48□□□□□ -1.21
CAPN9-204ENST00000480004 ABCC6O95255 1503 aa7.48□□□□□ -1.21
CAPN9-204ENST00000480004 PRSS12P56730 875 aa7.48□□□□□ -1.21
CAPN9-204ENST00000480004 ARHGEF28Q8N1W1 1705 aaKnown RBP7.48□□□□□ -1.21
CAPN9-204ENST00000480004 ZNF710Q8N1W2 664 aa7.48□□□□□ -1.21
CAPN9-204ENST00000480004 DCAF11Q8TEB1 546 aa7.48□□□□□ -1.21
CAPN9-204ENST00000480004 FAM217BQ9NTX9 383 aaPredicted RBP7.48□□□□□ -1.21
CAPN9-204ENST00000480004 NLRP2Q9NX02 1062 aa7.48□□□□□ -1.21
CAPN9-204ENST00000480004 TRPM1Q7Z4N2 1603 aa7.48□□□□□ -1.21
CAPN9-204ENST00000480004 WDR90Q96KV7 1748 aa7.47□□□□□ -1.21
CAPN9-204ENST00000480004 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
CAPN9-204ENST00000480004 FAM161AQ3B820 660 aa7.47□□□□□ -1.21
CAPN9-204ENST00000480004 SH3D19Q5HYK7 790 aa7.47□□□□□ -1.21
CAPN9-204ENST00000480004 PPP4R3BQ5MIZ7 849 aa7.47□□□□□ -1.21
CAPN9-204ENST00000480004 SYTL4Q96C24 671 aaPredicted RBP7.47□□□□□ -1.21
CAPN9-204ENST00000480004 CDCA7LQ96GN5 454 aa7.47□□□□□ -1.21
CAPN9-204ENST00000480004 BCL2L12Q9HB09 334 aa7.47□□□□□ -1.21
CAPN9-204ENST00000480004 CCNL1Q9UK58 526 aaPredicted RBP7.47□□□□□ -1.21
CAPN9-204ENST00000480004 LHX6Q9UPM6 363 aa7.47□□□□□ -1.21
CAPN9-204ENST00000480004 IGSF1Q8N6C5 1336 aa7.47□□□□□ -1.21
CAPN9-204ENST00000480004 MSL1Q68DK7 614 aa7.46□□□□□ -1.22
CAPN9-204ENST00000480004 PPARGC1BQ86YN6 1023 aaKnown RBP7.46□□□□□ -1.22
CAPN9-204ENST00000480004 CABP1Q9NZU7 370 aa7.46□□□□□ -1.22
CAPN9-204ENST00000480004 SNPHO15079 494 aa7.45□□□□□ -1.22
CAPN9-204ENST00000480004 DDX54Q8TDD1 881 aaKnown RBP7.45□□□□□ -1.22
CAPN9-204ENST00000480004 PCMTD1Q96MG8 357 aaPredicted RBP7.45□□□□□ -1.22
CAPN9-204ENST00000480004 RSPH6AQ9H0K4 717 aa7.45□□□□□ -1.22
CAPN9-204ENST00000480004 TTC21AQ8NDW8 1320 aa7.45□□□□□ -1.22
CAPN9-204ENST00000480004 KDM2BQ8NHM5 1336 aa7.45□□□□□ -1.22
CAPN9-204ENST00000480004 ANKRD36BQ8N2N9 1353 aa7.45□□□□□ -1.22
CAPN9-204ENST00000480004 USP47Q96K76 1375 aa7.45□□□□□ -1.22
CAPN9-204ENST00000480004 HSPA1AP0DMV8 641 aaKnown RBP7.44□□□□□ -1.22
CAPN9-204ENST00000480004 HSPA1BP0DMV9 641 aaKnown RBP7.44□□□□□ -1.22
CAPN9-204ENST00000480004 KCNQ4P56696 695 aa7.44□□□□□ -1.22
CAPN9-204ENST00000480004 FLIIQ13045 1269 aa7.44□□□□□ -1.22
CAPN9-204ENST00000480004 SMC1BQ8NDV3 1235 aa7.44□□□□□ -1.22
CAPN9-204ENST00000480004 NMRK2Q9NPI5 230 aa7.44□□□□□ -1.22
CAPN9-204ENST00000480004 ERBB3P21860 1342 aa7.44□□□□□ -1.22
CAPN9-204ENST00000480004 RGPD5Q99666 1765 aa7.43□□□□□ -1.22
CAPN9-204ENST00000480004 PPP1R3GB7ZBB8 358 aa7.43□□□□□ -1.22
CAPN9-204ENST00000480004 HOXB1P14653 301 aaPredicted RBP7.43□□□□□ -1.22
CAPN9-204ENST00000480004 COL9A1P20849 921 aa7.43□□□□□ -1.22
CAPN9-204ENST00000480004 HTRA3P83110 453 aa7.43□□□□□ -1.22
CAPN9-204ENST00000480004 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
CAPN9-204ENST00000480004 BEGAINQ9BUH8 593 aa7.43□□□□□ -1.22
CAPN9-204ENST00000480004 ZMYND15Q9H091 742 aa7.43□□□□□ -1.22
CAPN9-204ENST00000480004 TTC21BQ7Z4L5 1316 aa7.43□□□□□ -1.22
CAPN9-204ENST00000480004 PLEKHG2Q9H7P9 1386 aa7.43□□□□□ -1.22
CAPN9-204ENST00000480004 TUBGCP6Q96RT7 1819 aa7.43□□□□□ -1.22
CAPN9-204ENST00000480004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.42□□□□□ -1.22
CAPN9-204ENST00000480004 PTPREP23469 700 aa7.42□□□□□ -1.22
CAPN9-204ENST00000480004 TGFB2P61812 414 aa7.42□□□□□ -1.22
CAPN9-204ENST00000480004 ARHGAP27Q6ZUM4 889 aa7.42□□□□□ -1.22
CAPN9-204ENST00000480004 NLRP7Q8WX94 980 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms