RNA–Protein interactions for RNA: ENST00000479788.5

DUSP28-204, Transcript of dual specificity phosphatase 28, humanhuman

TSL 3

Gene DUSP28, Length 450 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-204ENST00000479788 TTC21BQ7Z4L5 1316 aa8.08□□□□□ -1.12
DUSP28-204ENST00000479788 PRR20EP86478 221 aa8.08□□□□□ -1.12
DUSP28-204ENST00000479788 PRR20CP86479 221 aa8.08□□□□□ -1.12
DUSP28-204ENST00000479788 PRR20DP86480 221 aa8.08□□□□□ -1.12
DUSP28-204ENST00000479788 PRR20BP86481 221 aa8.08□□□□□ -1.12
DUSP28-204ENST00000479788 PRR20AP86496 221 aa8.08□□□□□ -1.12
DUSP28-204ENST00000479788 HDGFL2Q7Z4V5 671 aaPredicted RBP8.08□□□□□ -1.12
DUSP28-204ENST00000479788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.08□□□□□ -1.12
DUSP28-204ENST00000479788 TTC13Q8NBP0 860 aa8.08□□□□□ -1.12
DUSP28-204ENST00000479788 PRR14Q9BWN1 585 aa8.08□□□□□ -1.12
DUSP28-204ENST00000479788 LTN1O94822 1766 aa8.07□□□□□ -1.12
DUSP28-204ENST00000479788 SPATA31A1Q5TZJ5 1347 aa8.07□□□□□ -1.12
DUSP28-204ENST00000479788 TTC21AQ8NDW8 1320 aa8.07□□□□□ -1.12
DUSP28-204ENST00000479788 ST20-MTHFSA0A0A6YYL1 179 aa8.07□□□□□ -1.12
DUSP28-204ENST00000479788 SLC19A1P41440 591 aa8.07□□□□□ -1.12
DUSP28-204ENST00000479788 LMO7Q8WWI1 1683 aa8.07□□□□□ -1.12
DUSP28-204ENST00000479788 CAMTA1Q9Y6Y1 1673 aa8.07□□□□□ -1.12
DUSP28-204ENST00000479788 CPDO75976 1380 aa8.07□□□□□ -1.12
DUSP28-204ENST00000479788 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 BLMP54132 1417 aaPredicted RBP8.06□□□□□ -1.12
DUSP28-204ENST00000479788 SSH2Q76I76 1423 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 THSD7AQ9UPZ6 1657 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 SLC24A1O60721 1099 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 RNF40O75150 1001 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 SLC4A3P48751 1232 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 PRIM1P49642 420 aaKnown RBP8.06□□□□□ -1.12
DUSP28-204ENST00000479788 PKDCCQ504Y2 493 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 LARP1Q6PKG0 1096 aaKnown RBP8.06□□□□□ -1.12
DUSP28-204ENST00000479788 KCNH5Q8NCM2 988 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 TERF2IPQ9NYB0 399 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 SLIT3O75094 1523 aa8.06□□□□□ -1.12
DUSP28-204ENST00000479788 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
DUSP28-204ENST00000479788 COL18A1P39060 1754 aa8.05□□□□□ -1.12
DUSP28-204ENST00000479788 GRXCR2A6NFK2 248 aa8.05□□□□□ -1.12
DUSP28-204ENST00000479788 COPS2P61201 443 aa8.05□□□□□ -1.12
DUSP28-204ENST00000479788 PDE3BQ13370 1112 aa8.05□□□□□ -1.12
DUSP28-204ENST00000479788 FAM182BQ5T319 152 aa8.05□□□□□ -1.12
DUSP28-204ENST00000479788 ZNF598Q86UK7 904 aaKnown RBP8.05□□□□□ -1.12
DUSP28-204ENST00000479788 TCP11L2Q8N4U5 519 aa8.05□□□□□ -1.12
DUSP28-204ENST00000479788 CCER1Q8TC90 406 aaPredicted RBP8.05□□□□□ -1.12
DUSP28-204ENST00000479788 SLC12A5Q9H2X9 1139 aa8.05□□□□□ -1.12
DUSP28-204ENST00000479788 USP47Q96K76 1375 aa8.05□□□□□ -1.12
DUSP28-204ENST00000479788 CLSPNQ9HAW4 1339 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 WNK3Q9BYP7 1800 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 RNF223E7ERA6 249 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 CSB-PGBD3P0DP91 1061 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 BAG6P46379 1132 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 TMF1P82094 1093 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 SWT1Q5T5J6 900 aaKnown RBP8.04□□□□□ -1.12
DUSP28-204ENST00000479788 SPRYD7Q5W111 196 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 TOM1L2Q6ZVM7 507 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 DEFB132Q7Z7B7 95 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 TIMELESSQ9UNS1 1208 aa8.04□□□□□ -1.12
DUSP28-204ENST00000479788 COL5A2P05997 1499 aaPredicted RBP8.04□□□□□ -1.12
DUSP28-204ENST00000479788 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
DUSP28-204ENST00000479788 USP54Q70EL1 1684 aa8.03□□□□□ -1.12
DUSP28-204ENST00000479788 A0A1W2PP64 1363 aa8.03□□□□□ -1.12
DUSP28-204ENST00000479788 AATKQ6ZMQ8 1374 aa8.03□□□□□ -1.12
DUSP28-204ENST00000479788 BARGINQ6ZT62 677 aa8.03□□□□□ -1.12
DUSP28-204ENST00000479788 NME9Q86XW9 330 aa8.03□□□□□ -1.12
DUSP28-204ENST00000479788 ANKLE1Q8NAG6 615 aa8.03□□□□□ -1.12
DUSP28-204ENST00000479788 EMID1Q96A84 441 aaPredicted RBP8.03□□□□□ -1.12
DUSP28-204ENST00000479788 PUS7Q96PZ0 661 aaKnown RBP8.03□□□□□ -1.12
DUSP28-204ENST00000479788 TESK2Q96S53 571 aa8.03□□□□□ -1.12
DUSP28-204ENST00000479788 THRAP3Q9Y2W1 955 aaKnown RBP8.03□□□□□ -1.12
DUSP28-204ENST00000479788 CRB1P82279 1406 aa8.03□□□□□ -1.12
DUSP28-204ENST00000479788 EDC4Q6P2E9 1401 aaKnown RBP8.03□□□□□ -1.12
DUSP28-204ENST00000479788 CD163L1Q9NR16 1453 aa8.02□□□□□ -1.13
DUSP28-204ENST00000479788 NINLQ9Y2I6 1382 aa8.02□□□□□ -1.13
DUSP28-204ENST00000479788 SBF2Q86WG5 1849 aa8.02□□□□□ -1.13
DUSP28-204ENST00000479788 SEMA3EO15041 775 aa8.02□□□□□ -1.13
DUSP28-204ENST00000479788 OSBPP22059 807 aa8.02□□□□□ -1.13
DUSP28-204ENST00000479788 MLLT3P42568 568 aaPredicted RBP8.02□□□□□ -1.13
DUSP28-204ENST00000479788 FAM196AQ6ZSG2 479 aa8.02□□□□□ -1.13
DUSP28-204ENST00000479788 ARHGEF25Q86VW2 580 aa8.02□□□□□ -1.13
DUSP28-204ENST00000479788 TNS1Q9HBL0 1735 aaKnown RBP8.02□□□□□ -1.13
DUSP28-204ENST00000479788 NFAT5O94916 1531 aa8.02□□□□□ -1.13
DUSP28-204ENST00000479788 KIF20BQ96Q89 1820 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 USP31Q70CQ4 1352 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 TRIM37O94972 964 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 CDCA8Q53HL2 280 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
DUSP28-204ENST00000479788 TREML4Q6UXN2 200 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 COG3Q96JB2 828 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 PCDHB3Q9Y5E6 796 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 SRCAPQ6ZRS2 3230 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 WDR17Q8IZU2 1322 aa8.01□□□□□ -1.13
DUSP28-204ENST00000479788 POTECB2RU33 542 aa8□□□□□ -1.13
DUSP28-204ENST00000479788 DDB1Q16531 1140 aa8□□□□□ -1.13
DUSP28-204ENST00000479788 LRRC37A3O60309 1634 aa8□□□□□ -1.13
DUSP28-204ENST00000479788 RGPD2P0DJD1 1756 aa7.99□□□□□ -1.13
DUSP28-204ENST00000479788 ANKRD36BQ8N2N9 1353 aa7.99□□□□□ -1.13
DUSP28-204ENST00000479788 APBA3O96018 575 aa7.99□□□□□ -1.13
DUSP28-204ENST00000479788 EYA1Q99502 592 aa7.99□□□□□ -1.13
DUSP28-204ENST00000479788 CDCA7Q9BWT1 371 aaPredicted RBP7.99□□□□□ -1.13
DUSP28-204ENST00000479788 CARD10Q9BWT7 1032 aa7.99□□□□□ -1.13
DUSP28-204ENST00000479788 CDHR5Q9HBB8 845 aa7.99□□□□□ -1.13
DUSP28-204ENST00000479788 NLRP2Q9NX02 1062 aa7.99□□□□□ -1.13
DUSP28-204ENST00000479788 MAP2P11137 1827 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms