RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 F13A1P00488 732 aa24.86■■□□□ 1.57
COL13A1-208ENST00000479733 FLIIQ13045 1269 aa24.86■■□□□ 1.57
COL13A1-208ENST00000479733 PDCL2Q8N4E4 241 aa24.86■■□□□ 1.57
COL13A1-208ENST00000479733 TMEM87AQ8NBN3 555 aa24.86■■□□□ 1.57
COL13A1-208ENST00000479733 GNAI3P08754 354 aa24.85■■□□□ 1.57
COL13A1-208ENST00000479733 LARGE1O95461 756 aa24.85■■□□□ 1.57
COL13A1-208ENST00000479733 CCDC83Q8IWF9 413 aa24.85■■□□□ 1.57
COL13A1-208ENST00000479733 KIAA1524Q8TCG1 905 aa24.85■■□□□ 1.57
COL13A1-208ENST00000479733 CHAF1AQ13111 956 aaPredicted RBP24.85■■□□□ 1.57
COL13A1-208ENST00000479733 MTHFSDQ2M296 383 aaKnown RBP24.85■■□□□ 1.57
COL13A1-208ENST00000479733 CWC27Q6UX04 472 aaKnown RBP24.85■■□□□ 1.57
COL13A1-208ENST00000479733 BCL11BQ9C0K0 894 aaPredicted RBP24.85■■□□□ 1.57
COL13A1-208ENST00000479733 STAP2Q9UGK3 403 aa24.84■■□□□ 1.57
COL13A1-208ENST00000479733 TMEM131LA2VDJ0 1609 aa24.84■■□□□ 1.57
COL13A1-208ENST00000479733 LIMCH1Q9UPQ0 1083 aa24.84■■□□□ 1.57
COL13A1-208ENST00000479733 VPS37CA5D8V6 355 aaPredicted RBP24.83■■□□□ 1.57
COL13A1-208ENST00000479733 SURF6O75683 361 aaKnown RBP24.83■■□□□ 1.57
COL13A1-208ENST00000479733 U2AF2P26368 475 aaKnown RBP eCLIP24.83■■□□□ 1.57
COL13A1-208ENST00000479733 CASTP20810 708 aaKnown RBP24.82■■□□□ 1.56
COL13A1-208ENST00000479733 CAMK4Q16566 473 aa24.82■■□□□ 1.56
COL13A1-208ENST00000479733 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-208ENST00000479733 CRB1P82279 1406 aa24.82■■□□□ 1.56
COL13A1-208ENST00000479733 A0A0U1RQG5 324 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-208ENST00000479733 GJB2P29033 226 aa24.81■■□□□ 1.56
COL13A1-208ENST00000479733 FUCA2Q9BTY2 467 aa24.81■■□□□ 1.56
COL13A1-208ENST00000479733 SSH2Q76I76 1423 aa24.81■■□□□ 1.56
COL13A1-208ENST00000479733 PLEKHG5O94827 1062 aa24.81■■□□□ 1.56
COL13A1-208ENST00000479733 UTP14CQ5TAP6 766 aaKnown RBP24.81■■□□□ 1.56
COL13A1-208ENST00000479733 PODXL2Q9NZ53 605 aa24.81■■□□□ 1.56
COL13A1-208ENST00000479733 TTC14Q96N46 770 aa24.8■■□□□ 1.56
COL13A1-208ENST00000479733 PTGS1P23219 599 aa24.8■■□□□ 1.56
COL13A1-208ENST00000479733 DIAPH3Q9NSV4 1193 aa24.8■■□□□ 1.56
COL13A1-208ENST00000479733 ATP6V1DQ9Y5K8 247 aa24.8■■□□□ 1.56
COL13A1-208ENST00000479733 SGSM2O43147 1006 aa24.79■■□□□ 1.56
COL13A1-208ENST00000479733 UBTFL1P0CB47 393 aaPredicted RBP24.79■■□□□ 1.56
COL13A1-208ENST00000479733 RAD50Q92878 1312 aa24.79■■□□□ 1.56
COL13A1-208ENST00000479733 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
COL13A1-208ENST00000479733 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
COL13A1-208ENST00000479733 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
COL13A1-208ENST00000479733 FAM173BQ6P4H8 233 aa24.79■■□□□ 1.56
COL13A1-208ENST00000479733 FERMT3Q86UX7 667 aa24.79■■□□□ 1.56
COL13A1-208ENST00000479733 MAP3K19Q56UN5 1328 aa24.78■■□□□ 1.56
COL13A1-208ENST00000479733 USP44Q9H0E7 712 aa24.78■■□□□ 1.56
COL13A1-208ENST00000479733 NECAB1Q8N987 351 aa24.77■■□□□ 1.56
COL13A1-208ENST00000479733 LSG1Q9H089 658 aaKnown RBP24.77■■□□□ 1.56
COL13A1-208ENST00000479733 PPP1R42Q7Z4L9 355 aa24.77■■□□□ 1.56
COL13A1-208ENST00000479733 LUZP1Q86V48 1076 aa24.77■■□□□ 1.56
COL13A1-208ENST00000479733 DRC7Q8IY82 874 aa24.76■■□□□ 1.55
COL13A1-208ENST00000479733 MTMR6Q9Y217 621 aa24.76■■□□□ 1.55
COL13A1-208ENST00000479733 CCDC192P0DO97 292 aa24.76■■□□□ 1.55
COL13A1-208ENST00000479733 CKAP2LQ8IYA6 745 aa24.76■■□□□ 1.55
COL13A1-208ENST00000479733 LRMPQ12912 555 aa24.75■■□□□ 1.55
COL13A1-208ENST00000479733 ADCK5Q3MIX3 580 aa24.75■■□□□ 1.55
COL13A1-208ENST00000479733 CCDC30Q5VVM6 783 aa24.75■■□□□ 1.55
COL13A1-208ENST00000479733 PI4K2BQ8TCG2 481 aa24.75■■□□□ 1.55
COL13A1-208ENST00000479733 C16orf45Q96MC5 204 aaPredicted RBP24.75■■□□□ 1.55
COL13A1-208ENST00000479733 JAKMIP1Q96N16 626 aaKnown RBP24.75■■□□□ 1.55
COL13A1-208ENST00000479733 PRR36Q9H6K5 1346 aa24.75■■□□□ 1.55
COL13A1-208ENST00000479733 GOLGA6L6A8MZA4 724 aa24.75■■□□□ 1.55
COL13A1-208ENST00000479733 RHPN1Q8TCX5 695 aa24.75■■□□□ 1.55
COL13A1-208ENST00000479733 IL17RAQ96F46 866 aa24.75■■□□□ 1.55
COL13A1-208ENST00000479733 SOS1Q07889 1333 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-208ENST00000479733 PRPF40BQ6NWY9 871 aaKnown RBP24.74■■□□□ 1.55
COL13A1-208ENST00000479733 HYPKQ9NX55 129 aa24.74■■□□□ 1.55
COL13A1-208ENST00000479733 METP08581 1390 aa24.74■■□□□ 1.55
COL13A1-208ENST00000479733 CCDC186Q7Z3E2 898 aa24.73■■□□□ 1.55
COL13A1-208ENST00000479733 PDRG1Q9NUG6 133 aa24.73■■□□□ 1.55
COL13A1-208ENST00000479733 SRGAP3O43295 1099 aa24.73■■□□□ 1.55
COL13A1-208ENST00000479733 NRBP1Q9UHY1 535 aa24.73■■□□□ 1.55
COL13A1-208ENST00000479733 TTC21BQ7Z4L5 1316 aa24.73■■□□□ 1.55
COL13A1-208ENST00000479733 DIP2CQ9Y2E4 1556 aa24.73■■□□□ 1.55
COL13A1-208ENST00000479733 CNTROBQ8N137 903 aa24.72■■□□□ 1.55
COL13A1-208ENST00000479733 PHAXQ9H814 394 aaKnown RBP24.72■■□□□ 1.55
COL13A1-208ENST00000479733 GTPBP4Q9BZE4 634 aaKnown RBP24.72■■□□□ 1.55
COL13A1-208ENST00000479733 LIG1P18858 919 aa24.72■■□□□ 1.55
COL13A1-208ENST00000479733 PTH1RQ03431 593 aa24.72■■□□□ 1.55
COL13A1-208ENST00000479733 MLECQ14165 292 aa24.71■■□□□ 1.55
COL13A1-208ENST00000479733 NAA30Q147X3 362 aaPredicted RBP24.71■■□□□ 1.55
COL13A1-208ENST00000479733 PREX1Q8TCU6 1659 aa24.71■■□□□ 1.55
COL13A1-208ENST00000479733 TTC6Q86TZ1 520 aa24.7■■□□□ 1.54
COL13A1-208ENST00000479733 SSH3Q8TE77 659 aa24.7■■□□□ 1.54
COL13A1-208ENST00000479733 NEO1Q92859 1461 aa24.7■■□□□ 1.54
COL13A1-208ENST00000479733 OS9Q13438 667 aaPredicted RBP24.69■■□□□ 1.54
COL13A1-208ENST00000479733 ACEP12821 1306 aa24.69■■□□□ 1.54
COL13A1-208ENST00000479733 TPM3P06753 285 aa24.69■■□□□ 1.54
COL13A1-208ENST00000479733 TYRO3Q06418 890 aa24.69■■□□□ 1.54
COL13A1-208ENST00000479733 FAM69CQ0P6D2 419 aa24.69■■□□□ 1.54
COL13A1-208ENST00000479733 FAM200AQ8TCP9 573 aa24.69■■□□□ 1.54
COL13A1-208ENST00000479733 ANKRD7Q92527 254 aa24.69■■□□□ 1.54
COL13A1-208ENST00000479733 NUP62CLQ9H1M0 184 aa24.69■■□□□ 1.54
COL13A1-208ENST00000479733 TFIP11Q9UBB9 837 aaKnown RBP24.69■■□□□ 1.54
COL13A1-208ENST00000479733 MAP3K11Q16584 847 aa24.68■■□□□ 1.54
COL13A1-208ENST00000479733 ME3Q16798 604 aa24.68■■□□□ 1.54
COL13A1-208ENST00000479733 LARP1BQ659C4 914 aaKnown RBP24.68■■□□□ 1.54
COL13A1-208ENST00000479733 TCEANC2Q96MN5 208 aa24.68■■□□□ 1.54
COL13A1-208ENST00000479733 MRVI1Q9Y6F6 885 aa24.68■■□□□ 1.54
COL13A1-208ENST00000479733 AOX1Q06278 1338 aa24.68■■□□□ 1.54
COL13A1-208ENST00000479733 TRIM5Q9C035 493 aa24.68■■□□□ 1.54
COL13A1-208ENST00000479733 EIF2S2P20042 333 aaKnown RBP24.67■■□□□ 1.54
COL13A1-208ENST00000479733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms