RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 MAPK8IP3Q9UPT6 1336 aa13.93□□□□□ -0.18
SP140-210ENST00000479539 TAF1LQ8IZX4 1826 aa13.93□□□□□ -0.18
SP140-210ENST00000479539 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
SP140-210ENST00000479539 MMP10P09238 476 aa13.92□□□□□ -0.18
SP140-210ENST00000479539 KLHL34Q8N239 644 aa13.92□□□□□ -0.18
SP140-210ENST00000479539 NLGN2Q8NFZ4 835 aa13.92□□□□□ -0.18
SP140-210ENST00000479539 ADAMTS8Q9UP79 889 aa13.92□□□□□ -0.18
SP140-210ENST00000479539 TUBGCP6Q96RT7 1819 aa13.92□□□□□ -0.18
SP140-210ENST00000479539 USP42Q9H9J4 1324 aaKnown RBP13.91□□□□□ -0.18
SP140-210ENST00000479539 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
SP140-210ENST00000479539 EIF5P55010 431 aaKnown RBP13.91□□□□□ -0.18
SP140-210ENST00000479539 WDR43Q15061 677 aaKnown RBP eCLIP13.91□□□□□ -0.18
SP140-210ENST00000479539 PNISRQ8TF01 805 aaKnown RBP13.91□□□□□ -0.18
SP140-210ENST00000479539 SRP68Q9UHB9 627 aaKnown RBP13.91□□□□□ -0.18
SP140-210ENST00000479539 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
SP140-210ENST00000479539 SNRPA1P09661 255 aaKnown RBP13.9□□□□□ -0.18
SP140-210ENST00000479539 CANXP27824 592 aaKnown RBP13.9□□□□□ -0.18
SP140-210ENST00000479539 RIPK4P57078 832 aa13.9□□□□□ -0.18
SP140-210ENST00000479539 FKBP8Q14318 412 aa13.9□□□□□ -0.18
SP140-210ENST00000479539 RUNDC1Q96C34 613 aa13.9□□□□□ -0.18
SP140-210ENST00000479539 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
SP140-210ENST00000479539 NARFQ9UHQ1 456 aa13.9□□□□□ -0.18
SP140-210ENST00000479539 USP16Q9Y5T5 823 aa13.9□□□□□ -0.18
SP140-210ENST00000479539 UBR3Q6ZT12 1888 aa13.9□□□□□ -0.18
SP140-210ENST00000479539 UTRNP46939 3433 aa13.89□□□□□ -0.19
SP140-210ENST00000479539 ZPR1O75312 459 aa13.89□□□□□ -0.19
SP140-210ENST00000479539 A1BGP04217 495 aa13.89□□□□□ -0.19
SP140-210ENST00000479539 THUMPD2Q9BTF0 503 aaKnown RBP13.89□□□□□ -0.19
SP140-210ENST00000479539 CICQ96RK0 1608 aaPredicted RBP13.89□□□□□ -0.19
SP140-210ENST00000479539 A0A087WZG4 1122 aa13.88□□□□□ -0.19
SP140-210ENST00000479539 TM4SF1P30408 202 aa13.88□□□□□ -0.19
SP140-210ENST00000479539 IL6STP40189 918 aaPredicted RBP13.88□□□□□ -0.19
SP140-210ENST00000479539 USPL1Q5W0Q7 1092 aa13.88□□□□□ -0.19
SP140-210ENST00000479539 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
SP140-210ENST00000479539 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
SP140-210ENST00000479539 COL15A1P39059 1388 aa13.87□□□□□ -0.19
SP140-210ENST00000479539 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
SP140-210ENST00000479539 LMOD3Q0VAK6 560 aa13.87□□□□□ -0.19
SP140-210ENST00000479539 GPR162Q16538 588 aa13.87□□□□□ -0.19
SP140-210ENST00000479539 BCL2L12Q9HB09 334 aa13.87□□□□□ -0.19
SP140-210ENST00000479539 PARP3Q9Y6F1 533 aa13.87□□□□□ -0.19
SP140-210ENST00000479539 MYH14Q7Z406 1995 aaKnown RBP13.87□□□□□ -0.19
SP140-210ENST00000479539 COL5A3P25940 1745 aaPredicted RBP13.87□□□□□ -0.19
SP140-210ENST00000479539 TJP1Q07157 1748 aa13.87□□□□□ -0.19
SP140-210ENST00000479539 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
SP140-210ENST00000479539 DDR1Q08345 913 aa13.86□□□□□ -0.19
SP140-210ENST00000479539 BABAM1Q9NWV8 329 aa13.86□□□□□ -0.19
SP140-210ENST00000479539 RRP7AQ9Y3A4 280 aaKnown RBP13.86□□□□□ -0.19
SP140-210ENST00000479539 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
SP140-210ENST00000479539 TGFB2P61812 414 aa13.85□□□□□ -0.19
SP140-210ENST00000479539 CCDC184Q52MB2 194 aa13.85□□□□□ -0.19
SP140-210ENST00000479539 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
SP140-210ENST00000479539 POLRMTO00411 1230 aaKnown RBP13.84□□□□□ -0.19
SP140-210ENST00000479539 ANP32CO43423 234 aa13.84□□□□□ -0.19
SP140-210ENST00000479539 GRIN3BO60391 1043 aa13.84□□□□□ -0.19
SP140-210ENST00000479539 NFIXQ14938 502 aa13.84□□□□□ -0.19
SP140-210ENST00000479539 NEUROD2Q15784 382 aa13.84□□□□□ -0.19
SP140-210ENST00000479539 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
SP140-210ENST00000479539 YBX3P16989 372 aaKnown RBP eCLIP13.83□□□□□ -0.2
SP140-210ENST00000479539 YY1P25490 414 aa13.83□□□□□ -0.2
SP140-210ENST00000479539 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
SP140-210ENST00000479539 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
SP140-210ENST00000479539 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
SP140-210ENST00000479539 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
SP140-210ENST00000479539 TBC1D2BQ9UPU7 963 aa13.83□□□□□ -0.2
SP140-210ENST00000479539 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.2
SP140-210ENST00000479539 SIPA1L3O60292 1781 aaPredicted RBP13.82□□□□□ -0.2
SP140-210ENST00000479539 CHL1O00533 1208 aa13.82□□□□□ -0.2
SP140-210ENST00000479539 CAMTA2O94983 1202 aa13.82□□□□□ -0.2
SP140-210ENST00000479539 PIP4K2AP48426 406 aaPredicted RBP13.82□□□□□ -0.2
SP140-210ENST00000479539 NPM2Q86SE8 214 aaKnown RBP13.82□□□□□ -0.2
SP140-210ENST00000479539 ZNF330Q9Y3S2 320 aaPredicted RBP13.82□□□□□ -0.2
SP140-210ENST00000479539 C10orf71Q711Q0 1435 aa13.81□□□□□ -0.2
SP140-210ENST00000479539 APAF1O14727 1248 aa13.81□□□□□ -0.2
SP140-210ENST00000479539 DZIP3Q86Y13 1208 aaKnown RBP13.81□□□□□ -0.2
SP140-210ENST00000479539 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
SP140-210ENST00000479539 RGL2O15211 777 aa13.8□□□□□ -0.2
SP140-210ENST00000479539 SERPINB2P05120 415 aa13.8□□□□□ -0.2
SP140-210ENST00000479539 CLEC4GQ6UXB4 293 aa13.8□□□□□ -0.2
SP140-210ENST00000479539 GOLGB1Q14789 3259 aaKnown RBP13.79□□□□□ -0.2
SP140-210ENST00000479539 DPEP1P16444 411 aa13.79□□□□□ -0.2
SP140-210ENST00000479539 KCNA3P22001 575 aa13.79□□□□□ -0.2
SP140-210ENST00000479539 TBC1D9BQ66K14 1250 aa13.79□□□□□ -0.2
SP140-210ENST00000479539 PXDNLA1KZ92 1463 aa13.79□□□□□ -0.2
SP140-210ENST00000479539 BICDL1Q6ZP65 573 aa13.78□□□□□ -0.2
SP140-210ENST00000479539 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
SP140-210ENST00000479539 ZNF853P0CG23 659 aa13.77□□□□□ -0.21
SP140-210ENST00000479539 ERBB4Q15303 1308 aa13.77□□□□□ -0.21
SP140-210ENST00000479539 CFAP44Q96MT7 982 aa13.77□□□□□ -0.21
SP140-210ENST00000479539 SETDB2Q96T68 719 aa13.77□□□□□ -0.21
SP140-210ENST00000479539 PDIA6Q15084 440 aa13.76□□□□□ -0.21
SP140-210ENST00000479539 WWC3Q9ULE0 1092 aa13.76□□□□□ -0.21
SP140-210ENST00000479539 C4AP0C0L4 1744 aa13.76□□□□□ -0.21
SP140-210ENST00000479539 ERVV-1B6SEH8 477 aa13.75□□□□□ -0.21
SP140-210ENST00000479539 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
SP140-210ENST00000479539 LRP10Q7Z4F1 713 aa13.75□□□□□ -0.21
SP140-210ENST00000479539 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
SP140-210ENST00000479539 PIM2Q9P1W9 311 aa13.75□□□□□ -0.21
SP140-210ENST00000479539 ZNF652Q9Y2D9 606 aa13.75□□□□□ -0.21
SP140-210ENST00000479539 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms