RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 NPC1L1Q9UHC9 1359 aa10.48□□□□□ -0.73
HMGCL-205ENST00000479458 DICER1Q9UPY3 1922 aaKnown RBP10.47□□□□□ -0.73
HMGCL-205ENST00000479458 POTECB2RU33 542 aa10.47□□□□□ -0.73
HMGCL-205ENST00000479458 GNPATO15228 680 aa10.47□□□□□ -0.73
HMGCL-205ENST00000479458 PPM1GO15355 546 aaPredicted RBP10.47□□□□□ -0.73
HMGCL-205ENST00000479458 LMNB1P20700 586 aa10.47□□□□□ -0.73
HMGCL-205ENST00000479458 LBX1P52954 281 aa10.47□□□□□ -0.73
HMGCL-205ENST00000479458 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
HMGCL-205ENST00000479458 NBPF6Q5VWK0 638 aa10.47□□□□□ -0.73
HMGCL-205ENST00000479458 RAPGEF4Q8WZA2 1011 aa10.47□□□□□ -0.73
HMGCL-205ENST00000479458 NBPF4Q96M43 638 aa10.47□□□□□ -0.73
HMGCL-205ENST00000479458 MKRN1Q9UHC7 482 aaKnown RBP10.47□□□□□ -0.73
HMGCL-205ENST00000479458 GYS1P13807 737 aa10.46□□□□□ -0.73
HMGCL-205ENST00000479458 TRAPPC3LQ5T215 181 aa10.46□□□□□ -0.73
HMGCL-205ENST00000479458 RC3H1Q5TC82 1133 aaKnown RBP10.46□□□□□ -0.73
HMGCL-205ENST00000479458 PIGBQ92521 554 aa10.46□□□□□ -0.73
HMGCL-205ENST00000479458 PARP3Q9Y6F1 533 aa10.46□□□□□ -0.73
HMGCL-205ENST00000479458 NCAPD2Q15021 1401 aa10.46□□□□□ -0.74
HMGCL-205ENST00000479458 TIAM2Q8IVF5 1701 aa10.45□□□□□ -0.74
HMGCL-205ENST00000479458 PASKQ96RG2 1323 aa10.45□□□□□ -0.74
HMGCL-205ENST00000479458 HSPA8P11142 646 aaKnown RBP10.45□□□□□ -0.74
HMGCL-205ENST00000479458 TATP17735 454 aaPredicted RBP10.45□□□□□ -0.74
HMGCL-205ENST00000479458 ZEB1P37275 1124 aaPredicted RBP10.45□□□□□ -0.74
HMGCL-205ENST00000479458 CHADLQ6NUI6 762 aa10.45□□□□□ -0.74
HMGCL-205ENST00000479458 USHBP1Q8N6Y0 703 aa10.45□□□□□ -0.74
HMGCL-205ENST00000479458 RTCBQ9Y3I0 505 aaKnown RBP10.45□□□□□ -0.74
HMGCL-205ENST00000479458 TNRC18O15417 2968 aaPredicted RBP10.44□□□□□ -0.74
HMGCL-205ENST00000479458 CYP27B1O15528 508 aa10.44□□□□□ -0.74
HMGCL-205ENST00000479458 MAP2K1Q02750 393 aaPredicted RBP10.44□□□□□ -0.74
HMGCL-205ENST00000479458 ITPK1Q13572 414 aa10.44□□□□□ -0.74
HMGCL-205ENST00000479458 EIF4A2Q14240 407 aaKnown RBP10.44□□□□□ -0.74
HMGCL-205ENST00000479458 CC2D1BQ5T0F9 858 aaKnown RBP10.44□□□□□ -0.74
HMGCL-205ENST00000479458 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
HMGCL-205ENST00000479458 VEGFBP49765 207 aa10.43□□□□□ -0.74
HMGCL-205ENST00000479458 ARHGEF1Q92888 912 aaKnown RBP10.43□□□□□ -0.74
HMGCL-205ENST00000479458 EYA1Q99502 592 aa10.43□□□□□ -0.74
HMGCL-205ENST00000479458 DLEC1Q9Y238 1755 aa10.43□□□□□ -0.74
HMGCL-205ENST00000479458 COL5A3P25940 1745 aaPredicted RBP10.43□□□□□ -0.74
HMGCL-205ENST00000479458 KDRP35968 1356 aa10.42□□□□□ -0.74
HMGCL-205ENST00000479458 CNTNAP4Q9C0A0 1308 aa10.42□□□□□ -0.74
HMGCL-205ENST00000479458 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
HMGCL-205ENST00000479458 MYH14Q7Z406 1995 aaKnown RBP10.42□□□□□ -0.74
HMGCL-205ENST00000479458 RASSF10A6NK89 507 aa10.41□□□□□ -0.74
HMGCL-205ENST00000479458 CCDC85CA6NKD9 419 aa10.41□□□□□ -0.74
HMGCL-205ENST00000479458 TMEM88BA6NKF7 163 aa10.41□□□□□ -0.74
HMGCL-205ENST00000479458 RPS6KA4O75676 772 aa10.41□□□□□ -0.74
HMGCL-205ENST00000479458 MTHFSP49914 203 aa10.41□□□□□ -0.74
HMGCL-205ENST00000479458 SCN4AP35499 1836 aa10.41□□□□□ -0.74
HMGCL-205ENST00000479458 THSD7BQ9C0I4 1608 aa10.4□□□□□ -0.74
HMGCL-205ENST00000479458 RFC4P35249 363 aa10.4□□□□□ -0.74
HMGCL-205ENST00000479458 RASSF7Q02833 373 aa10.4□□□□□ -0.74
HMGCL-205ENST00000479458 CNGB1Q14028 1251 aaPredicted RBP10.4□□□□□ -0.74
HMGCL-205ENST00000479458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.74
HMGCL-205ENST00000479458 LDHDQ86WU2 507 aa10.39□□□□□ -0.75
HMGCL-205ENST00000479458 ASAP1Q9ULH1 1129 aa10.39□□□□□ -0.75
HMGCL-205ENST00000479458 NRXN2Q9P2S2 1712 aa10.38□□□□□ -0.75
HMGCL-205ENST00000479458 FER1L6Q2WGJ9 1857 aa10.38□□□□□ -0.75
HMGCL-205ENST00000479458 COL3A1P02461 1466 aaPredicted RBP10.38□□□□□ -0.75
HMGCL-205ENST00000479458 ITGBL1O95965 494 aaPredicted RBP10.38□□□□□ -0.75
HMGCL-205ENST00000479458 CHRNA5P30532 468 aa10.38□□□□□ -0.75
HMGCL-205ENST00000479458 IL13P35225 146 aa10.38□□□□□ -0.75
HMGCL-205ENST00000479458 TMOD3Q9NYL9 352 aa10.38□□□□□ -0.75
HMGCL-205ENST00000479458 NFKBIEO00221 500 aa10.37□□□□□ -0.75
HMGCL-205ENST00000479458 TM4SF1P30408 202 aa10.37□□□□□ -0.75
HMGCL-205ENST00000479458 DDR1Q08345 913 aa10.37□□□□□ -0.75
HMGCL-205ENST00000479458 DEFB115Q30KQ5 88 aa10.37□□□□□ -0.75
HMGCL-205ENST00000479458 ATG3Q9NT62 314 aa10.37□□□□□ -0.75
HMGCL-205ENST00000479458 USP42Q9H9J4 1324 aaKnown RBP10.36□□□□□ -0.75
HMGCL-205ENST00000479458 LTBP3Q9NS15 1303 aa10.36□□□□□ -0.75
HMGCL-205ENST00000479458 AFDNP55196 1824 aaKnown RBP10.36□□□□□ -0.75
HMGCL-205ENST00000479458 IQCA1LA6NCM1 817 aa10.36□□□□□ -0.75
HMGCL-205ENST00000479458 POLRMTO00411 1230 aaKnown RBP10.36□□□□□ -0.75
HMGCL-205ENST00000479458 AEBP1Q8IUX7 1158 aa10.36□□□□□ -0.75
HMGCL-205ENST00000479458 REM2Q8IYK8 340 aaPredicted RBP10.36□□□□□ -0.75
HMGCL-205ENST00000479458 TTLL6Q8N841 843 aa10.36□□□□□ -0.75
HMGCL-205ENST00000479458 L3MBTL3Q96JM7 780 aaPredicted RBP10.36□□□□□ -0.75
HMGCL-205ENST00000479458 ADAMTSL1Q8N6G6 1762 aa10.36□□□□□ -0.75
HMGCL-205ENST00000479458 WDR33Q9C0J8 1336 aaKnown RBP10.35□□□□□ -0.75
HMGCL-205ENST00000479458 ADAMTS7Q9UKP4 1686 aa10.35□□□□□ -0.75
HMGCL-205ENST00000479458 DIAPH1O60610 1272 aaKnown RBP10.35□□□□□ -0.75
HMGCL-205ENST00000479458 PPP2R1AP30153 589 aa10.35□□□□□ -0.75
HMGCL-205ENST00000479458 DDX10Q13206 875 aaKnown RBP10.35□□□□□ -0.75
HMGCL-205ENST00000479458 PRPF38BQ5VTL8 546 aaKnown RBP10.35□□□□□ -0.75
HMGCL-205ENST00000479458 SLC4A9Q96Q91 983 aa10.35□□□□□ -0.75
HMGCL-205ENST00000479458 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
HMGCL-205ENST00000479458 POTEIP0CG38 1075 aa10.34□□□□□ -0.75
HMGCL-205ENST00000479458 POTEJP0CG39 1038 aa10.34□□□□□ -0.75
HMGCL-205ENST00000479458 ERFEQ4G0M1 354 aa10.34□□□□□ -0.75
HMGCL-205ENST00000479458 SULT6B1Q6IMI4 303 aa10.34□□□□□ -0.75
HMGCL-205ENST00000479458 PDZRN3Q9UPQ7 1066 aa10.34□□□□□ -0.75
HMGCL-205ENST00000479458 CA12O43570 354 aa10.33□□□□□ -0.76
HMGCL-205ENST00000479458 PHKG2P15735 406 aa10.33□□□□□ -0.76
HMGCL-205ENST00000479458 IFNL2Q8IZJ0 200 aa10.33□□□□□ -0.76
HMGCL-205ENST00000479458 TAF1DQ9H5J8 278 aaPredicted RBP10.33□□□□□ -0.76
HMGCL-205ENST00000479458 CASP8AP2Q9UKL3 1982 aa10.32□□□□□ -0.76
HMGCL-205ENST00000479458 ERVV-2B6SEH9 535 aa10.32□□□□□ -0.76
HMGCL-205ENST00000479458 HMOX1P09601 288 aa10.32□□□□□ -0.76
HMGCL-205ENST00000479458 AMOTQ4VCS5 1084 aa10.32□□□□□ -0.76
HMGCL-205ENST00000479458 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
HMGCL-205ENST00000479458 BEGAINQ9BUH8 593 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms