RNA–Protein interactions for RNA: ENST00000479317.1

RRP12-206, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 3

Gene RRP12, Length 411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-206ENST00000479317 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
RRP12-206ENST00000479317 CD2APQ9Y5K6 639 aa13.37□□□□□ -0.27
RRP12-206ENST00000479317 ZNF831Q5JPB2 1677 aa13.37□□□□□ -0.27
RRP12-206ENST00000479317 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
RRP12-206ENST00000479317 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
RRP12-206ENST00000479317 NPM2Q86SE8 214 aaKnown RBP13.36□□□□□ -0.27
RRP12-206ENST00000479317 RRP7AQ9Y3A4 280 aaKnown RBP13.36□□□□□ -0.27
RRP12-206ENST00000479317 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
RRP12-206ENST00000479317 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
RRP12-206ENST00000479317 A1BGP04217 495 aa13.35□□□□□ -0.27
RRP12-206ENST00000479317 FKBP8Q14318 412 aa13.35□□□□□ -0.27
RRP12-206ENST00000479317 GPR162Q16538 588 aa13.35□□□□□ -0.27
RRP12-206ENST00000479317 USPL1Q5W0Q7 1092 aa13.35□□□□□ -0.27
RRP12-206ENST00000479317 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
RRP12-206ENST00000479317 ZNF330Q9Y3S2 320 aaPredicted RBP13.35□□□□□ -0.27
RRP12-206ENST00000479317 PARP3Q9Y6F1 533 aa13.35□□□□□ -0.27
RRP12-206ENST00000479317 UBR3Q6ZT12 1888 aa13.34□□□□□ -0.27
RRP12-206ENST00000479317 A0A087WZG4 1122 aa13.34□□□□□ -0.27
RRP12-206ENST00000479317 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
RRP12-206ENST00000479317 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
RRP12-206ENST00000479317 NARFQ9UHQ1 456 aa13.34□□□□□ -0.27
RRP12-206ENST00000479317 IL6STP40189 918 aaPredicted RBP13.33□□□□□ -0.28
RRP12-206ENST00000479317 CCDC184Q52MB2 194 aa13.33□□□□□ -0.28
RRP12-206ENST00000479317 COL15A1P39059 1388 aa13.32□□□□□ -0.28
RRP12-206ENST00000479317 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
RRP12-206ENST00000479317 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
RRP12-206ENST00000479317 COL5A3P25940 1745 aaPredicted RBP13.31□□□□□ -0.28
RRP12-206ENST00000479317 TJP1Q07157 1748 aa13.31□□□□□ -0.28
RRP12-206ENST00000479317 APAF1O14727 1248 aa13.31□□□□□ -0.28
RRP12-206ENST00000479317 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
RRP12-206ENST00000479317 TM4SF1P30408 202 aa13.31□□□□□ -0.28
RRP12-206ENST00000479317 PIP4K2AP48426 406 aaPredicted RBP13.31□□□□□ -0.28
RRP12-206ENST00000479317 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
RRP12-206ENST00000479317 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
RRP12-206ENST00000479317 MYH14Q7Z406 1995 aaKnown RBP13.31□□□□□ -0.28
RRP12-206ENST00000479317 DDR1Q08345 913 aa13.3□□□□□ -0.28
RRP12-206ENST00000479317 BCL2L12Q9HB09 334 aa13.3□□□□□ -0.28
RRP12-206ENST00000479317 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
RRP12-206ENST00000479317 BABAM1Q9NWV8 329 aa13.3□□□□□ -0.28
RRP12-206ENST00000479317 COL24A1Q17RW2 1714 aa13.3□□□□□ -0.28
RRP12-206ENST00000479317 CICQ96RK0 1608 aaPredicted RBP13.29□□□□□ -0.28
RRP12-206ENST00000479317 YY1P25490 414 aa13.29□□□□□ -0.28
RRP12-206ENST00000479317 TGFB2P61812 414 aa13.29□□□□□ -0.28
RRP12-206ENST00000479317 NFIXQ14938 502 aa13.29□□□□□ -0.28
RRP12-206ENST00000479317 BICDL1Q6ZP65 573 aa13.29□□□□□ -0.28
RRP12-206ENST00000479317 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
RRP12-206ENST00000479317 LAS1LQ9Y4W2 734 aaKnown RBP13.29□□□□□ -0.28
RRP12-206ENST00000479317 NBPF26B4DH59 902 aa13.28□□□□□ -0.28
RRP12-206ENST00000479317 POLRMTO00411 1230 aaKnown RBP13.28□□□□□ -0.28
RRP12-206ENST00000479317 GRIN3BO60391 1043 aa13.28□□□□□ -0.28
RRP12-206ENST00000479317 NBPF10Q6P3W6 841 aaKnown RBP13.28□□□□□ -0.28
RRP12-206ENST00000479317 NBPF15Q8N660 670 aa13.28□□□□□ -0.28
RRP12-206ENST00000479317 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.28
RRP12-206ENST00000479317 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.28
RRP12-206ENST00000479317 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
RRP12-206ENST00000479317 CHL1O00533 1208 aa13.27□□□□□ -0.29
RRP12-206ENST00000479317 CAMTA2O94983 1202 aa13.27□□□□□ -0.29
RRP12-206ENST00000479317 SERPINB2P05120 415 aa13.27□□□□□ -0.29
RRP12-206ENST00000479317 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
RRP12-206ENST00000479317 WWC3Q9ULE0 1092 aa13.27□□□□□ -0.29
RRP12-206ENST00000479317 EIF2S2P20042 333 aaKnown RBP13.26□□□□□ -0.29
RRP12-206ENST00000479317 TBC1D9BQ66K14 1250 aa13.26□□□□□ -0.29
RRP12-206ENST00000479317 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
RRP12-206ENST00000479317 NGEFQ8N5V2 710 aa13.26□□□□□ -0.29
RRP12-206ENST00000479317 DPEP1P16444 411 aa13.25□□□□□ -0.29
RRP12-206ENST00000479317 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
RRP12-206ENST00000479317 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
RRP12-206ENST00000479317 SETDB2Q96T68 719 aa13.25□□□□□ -0.29
RRP12-206ENST00000479317 C10orf71Q711Q0 1435 aa13.24□□□□□ -0.29
RRP12-206ENST00000479317 MYL6BP14649 208 aa13.24□□□□□ -0.29
RRP12-206ENST00000479317 CLEC4GQ6UXB4 293 aa13.24□□□□□ -0.29
RRP12-206ENST00000479317 ZNF652Q9Y2D9 606 aa13.24□□□□□ -0.29
RRP12-206ENST00000479317 NPHP1O15259 732 aa13.23□□□□□ -0.29
RRP12-206ENST00000479317 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
RRP12-206ENST00000479317 KCNA3P22001 575 aa13.22□□□□□ -0.29
RRP12-206ENST00000479317 NECTIN2Q92692 538 aa13.22□□□□□ -0.29
RRP12-206ENST00000479317 PIM2Q9P1W9 311 aa13.22□□□□□ -0.29
RRP12-206ENST00000479317 BCS1LQ9Y276 419 aa13.22□□□□□ -0.29
RRP12-206ENST00000479317 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
RRP12-206ENST00000479317 C4AP0C0L4 1744 aa13.22□□□□□ -0.29
RRP12-206ENST00000479317 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 RGL2O15211 777 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 ZNF853P0CG23 659 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 CHRNA5P30532 468 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 GNAI1P63096 354 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 KIF6Q6ZMV9 814 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 MBIPQ9NS73 344 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 IFT57Q9NWB7 429 aa13.21□□□□□ -0.29
RRP12-206ENST00000479317 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
RRP12-206ENST00000479317 ERVV-1B6SEH8 477 aa13.2□□□□□ -0.3
RRP12-206ENST00000479317 HLFQ16534 295 aa13.2□□□□□ -0.3
RRP12-206ENST00000479317 DALRD3Q5D0E6 543 aaKnown RBP13.2□□□□□ -0.3
RRP12-206ENST00000479317 TTLL7Q6ZT98 887 aa13.2□□□□□ -0.3
RRP12-206ENST00000479317 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
RRP12-206ENST00000479317 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
RRP12-206ENST00000479317 NIP7Q9Y221 180 aaKnown RBP eCLIP13.2□□□□□ -0.3
RRP12-206ENST00000479317 MAP3K15Q6ZN16 1313 aa13.19□□□□□ -0.3
RRP12-206ENST00000479317 H0YIN7 160 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms