RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 MKNK1Q9BUB5 465 aa8.72□□□□□ -1.01
RFC4-212ENST00000479307 SOWAHDA6NJG2 315 aa8.71□□□□□ -1.02
RFC4-212ENST00000479307 PKDCCQ504Y2 493 aa8.71□□□□□ -1.02
RFC4-212ENST00000479307 SLC27A3Q5K4L6 730 aa8.71□□□□□ -1.02
RFC4-212ENST00000479307 TMEM214Q6NUQ4 689 aaKnown RBP8.71□□□□□ -1.02
RFC4-212ENST00000479307 MRPL14Q6P1L8 145 aaKnown RBP8.71□□□□□ -1.02
RFC4-212ENST00000479307 PURBQ96QR8 312 aaKnown RBP8.71□□□□□ -1.02
RFC4-212ENST00000479307 NIFKQ9BYG3 293 aaKnown RBP8.71□□□□□ -1.02
RFC4-212ENST00000479307 GRIP2Q9C0E4 1043 aa8.71□□□□□ -1.02
RFC4-212ENST00000479307 SERTM1A2A2V5 107 aa8.7□□□□□ -1.02
RFC4-212ENST00000479307 BMP2P12643 396 aa8.7□□□□□ -1.02
RFC4-212ENST00000479307 SCNN1AP37088 669 aa8.7□□□□□ -1.02
RFC4-212ENST00000479307 GNASQ5JWF2 1037 aa8.7□□□□□ -1.02
RFC4-212ENST00000479307 TBCELQ5QJ74 424 aa8.7□□□□□ -1.02
RFC4-212ENST00000479307 ZNF295-AS1Q8N0V1 137 aa8.7□□□□□ -1.02
RFC4-212ENST00000479307 INSM2Q96T92 566 aaPredicted RBP8.7□□□□□ -1.02
RFC4-212ENST00000479307 POLMQ9NP87 494 aaPredicted RBP8.7□□□□□ -1.02
RFC4-212ENST00000479307 USP3Q9Y6I4 520 aa8.7□□□□□ -1.02
RFC4-212ENST00000479307 EML1O00423 815 aa8.69□□□□□ -1.02
RFC4-212ENST00000479307 NOS2P35228 1153 aa8.69□□□□□ -1.02
RFC4-212ENST00000479307 SF3B2Q13435 895 aaKnown RBP8.69□□□□□ -1.02
RFC4-212ENST00000479307 SCARF1Q14162 830 aa8.69□□□□□ -1.02
RFC4-212ENST00000479307 CRIPAKQ8N1N5 446 aa8.69□□□□□ -1.02
RFC4-212ENST00000479307 CABP1Q9NZU7 370 aa8.69□□□□□ -1.02
RFC4-212ENST00000479307 SEPT3Q9UH03 358 aa8.69□□□□□ -1.02
RFC4-212ENST00000479307 SPATA31C2B4DYI2 1134 aa8.68□□□□□ -1.02
RFC4-212ENST00000479307 ICMTO60725 284 aa8.68□□□□□ -1.02
RFC4-212ENST00000479307 ABL1P00519 1130 aa8.68□□□□□ -1.02
RFC4-212ENST00000479307 CCDC27Q2M243 656 aa8.68□□□□□ -1.02
RFC4-212ENST00000479307 FOXD4L5Q5VV16 416 aaPredicted RBP8.68□□□□□ -1.02
RFC4-212ENST00000479307 HELQQ8TDG4 1101 aa8.68□□□□□ -1.02
RFC4-212ENST00000479307 GTF3C2Q8WUA4 911 aaPredicted RBP8.68□□□□□ -1.02
RFC4-212ENST00000479307 SHROOM4Q9ULL8 1493 aa8.68□□□□□ -1.02
RFC4-212ENST00000479307 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
RFC4-212ENST00000479307 FKBP4Q02790 459 aaKnown RBP eCLIP8.67□□□□□ -1.02
RFC4-212ENST00000479307 WDR44Q5JSH3 913 aa8.67□□□□□ -1.02
RFC4-212ENST00000479307 C16orf46Q6P387 395 aa8.67□□□□□ -1.02
RFC4-212ENST00000479307 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
RFC4-212ENST00000479307 MYO19Q96H55 970 aa8.67□□□□□ -1.02
RFC4-212ENST00000479307 ZNF232Q9UNY5 417 aa8.67□□□□□ -1.02
RFC4-212ENST00000479307 H3BRB1 525 aa8.66□□□□□ -1.02
RFC4-212ENST00000479307 AXIN1O15169 862 aa8.66□□□□□ -1.02
RFC4-212ENST00000479307 CTSOP43234 321 aaPredicted RBP8.66□□□□□ -1.02
RFC4-212ENST00000479307 C6orf118Q5T5N4 469 aa8.66□□□□□ -1.02
RFC4-212ENST00000479307 CAPN12Q6ZSI9 719 aa8.66□□□□□ -1.02
RFC4-212ENST00000479307 GLYCTKQ8IVS8 523 aa8.66□□□□□ -1.02
RFC4-212ENST00000479307 RNF217Q8TC41 542 aa8.66□□□□□ -1.02
RFC4-212ENST00000479307 ZDHHC1Q8WTX9 485 aa8.66□□□□□ -1.02
RFC4-212ENST00000479307 TUT1Q9H6E5 874 aaKnown RBP8.66□□□□□ -1.02
RFC4-212ENST00000479307 DNMT3AQ9Y6K1 912 aaPredicted RBP8.66□□□□□ -1.02
RFC4-212ENST00000479307 ZNF211Q13398 564 aaPredicted RBP8.65□□□□□ -1.02
RFC4-212ENST00000479307 NAA30Q147X3 362 aaPredicted RBP8.65□□□□□ -1.02
RFC4-212ENST00000479307 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.02
RFC4-212ENST00000479307 ZDHHC3Q9NYG2 299 aa8.65□□□□□ -1.02
RFC4-212ENST00000479307 TTLL8A6PVC2 850 aa8.64□□□□□ -1.03
RFC4-212ENST00000479307 POTECB2RU33 542 aa8.64□□□□□ -1.03
RFC4-212ENST00000479307 RTN1Q16799 776 aa8.64□□□□□ -1.03
RFC4-212ENST00000479307 NBPF1Q3BBV0 1214 aa8.64□□□□□ -1.03
RFC4-212ENST00000479307 C4orf17Q53FE4 359 aa8.64□□□□□ -1.03
RFC4-212ENST00000479307 LYSMD3Q7Z3D4 306 aa8.64□□□□□ -1.03
RFC4-212ENST00000479307 ALDH16A1Q8IZ83 802 aa8.64□□□□□ -1.03
RFC4-212ENST00000479307 QTRT2Q9H974 415 aaKnown RBP8.64□□□□□ -1.03
RFC4-212ENST00000479307 SOS2Q07890 1332 aaPredicted RBP8.63□□□□□ -1.03
RFC4-212ENST00000479307 FAM13AO94988 1023 aa8.63□□□□□ -1.03
RFC4-212ENST00000479307 BMP1P13497 986 aa8.63□□□□□ -1.03
RFC4-212ENST00000479307 NPR3P17342 541 aa8.63□□□□□ -1.03
RFC4-212ENST00000479307 PLA2G4AP47712 749 aa8.63□□□□□ -1.03
RFC4-212ENST00000479307 TRIM46Q7Z4K8 759 aa8.63□□□□□ -1.03
RFC4-212ENST00000479307 BIN2Q9UBW5 565 aaPredicted RBP8.63□□□□□ -1.03
RFC4-212ENST00000479307 GPC6Q9Y625 555 aaPredicted RBP8.63□□□□□ -1.03
RFC4-212ENST00000479307 CUX2O14529 1486 aa8.63□□□□□ -1.03
RFC4-212ENST00000479307 EIF4G1Q04637 1599 aaKnown RBP8.62□□□□□ -1.03
RFC4-212ENST00000479307 HIF1AQ16665 826 aa8.62□□□□□ -1.03
RFC4-212ENST00000479307 COX20Q5RI15 118 aa8.62□□□□□ -1.03
RFC4-212ENST00000479307 SH3PXD2AQ5TCZ1 1133 aa8.62□□□□□ -1.03
RFC4-212ENST00000479307 NBPF10Q6P3W6 841 aaKnown RBP8.62□□□□□ -1.03
RFC4-212ENST00000479307 PHACTR1Q9C0D0 580 aa8.62□□□□□ -1.03
RFC4-212ENST00000479307 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
RFC4-212ENST00000479307 TATP17735 454 aaPredicted RBP8.61□□□□□ -1.03
RFC4-212ENST00000479307 ABTB2Q8N961 1025 aa8.61□□□□□ -1.03
RFC4-212ENST00000479307 NGLY1Q96IV0 654 aa8.61□□□□□ -1.03
RFC4-212ENST00000479307 ZFP42Q96MM3 310 aa8.61□□□□□ -1.03
RFC4-212ENST00000479307 SAP130Q9H0E3 1048 aa8.61□□□□□ -1.03
RFC4-212ENST00000479307 STIM2Q9P246 746 aa8.61□□□□□ -1.03
RFC4-212ENST00000479307 HCN4Q9Y3Q4 1203 aa8.61□□□□□ -1.03
RFC4-212ENST00000479307 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
RFC4-212ENST00000479307 ERCC3P19447 782 aa8.6□□□□□ -1.03
RFC4-212ENST00000479307 BRD2P25440 801 aaKnown RBP8.6□□□□□ -1.03
RFC4-212ENST00000479307 MTMR3Q13615 1198 aa8.6□□□□□ -1.03
RFC4-212ENST00000479307 ALKBH2Q6NS38 261 aa8.6□□□□□ -1.03
RFC4-212ENST00000479307 PRICKLE2Q7Z3G6 844 aa8.6□□□□□ -1.03
RFC4-212ENST00000479307 LRFN2Q9ULH4 789 aa8.6□□□□□ -1.03
RFC4-212ENST00000479307 A0A1B0GTH6 734 aa8.59□□□□□ -1.03
RFC4-212ENST00000479307 TNFRSF10BO14763 440 aa8.59□□□□□ -1.03
RFC4-212ENST00000479307 TXLNAP40222 546 aa8.59□□□□□ -1.03
RFC4-212ENST00000479307 POU4F2Q12837 409 aa8.59□□□□□ -1.03
RFC4-212ENST00000479307 C11orf91Q3C1V1 193 aa8.59□□□□□ -1.03
RFC4-212ENST00000479307 AIDAQ96BJ3 306 aa8.59□□□□□ -1.03
RFC4-212ENST00000479307 AAASQ9NRG9 546 aa8.59□□□□□ -1.03
RFC4-212ENST00000479307 MPSTP25325 297 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms