RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 IL17RAQ96F46 866 aa10.34□□□□□ -0.75
USP30-206ENST00000479219 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
USP30-206ENST00000479219 DBF4Q9UBU7 674 aaPredicted RBP10.34□□□□□ -0.75
USP30-206ENST00000479219 POLA2Q14181 598 aa10.34□□□□□ -0.75
USP30-206ENST00000479219 ARHGEF25Q86VW2 580 aa10.34□□□□□ -0.75
USP30-206ENST00000479219 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
USP30-206ENST00000479219 ESYT1Q9BSJ8 1104 aa10.34□□□□□ -0.75
USP30-206ENST00000479219 PNMA6EA0A0J9YXQ4 647 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 GCP02774 474 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 USHBP1Q8N6Y0 703 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 DNAAF4Q8WXU2 420 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 ALS2Q96Q42 1657 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 ESPNB1AK53 854 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 KIF1BPQ96EK5 621 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 GRPEL1Q9HAV7 217 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 CRYBG1Q9Y4K1 1723 aa10.33□□□□□ -0.76
USP30-206ENST00000479219 ALDH1L1O75891 902 aa10.32□□□□□ -0.76
USP30-206ENST00000479219 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
USP30-206ENST00000479219 NECTIN2Q92692 538 aa10.32□□□□□ -0.76
USP30-206ENST00000479219 DCCP43146 1447 aa10.31□□□□□ -0.76
USP30-206ENST00000479219 HEG1Q9ULI3 1381 aa10.31□□□□□ -0.76
USP30-206ENST00000479219 SCN11AQ9UI33 1791 aa10.31□□□□□ -0.76
USP30-206ENST00000479219 TRIM6-TRIM34B2RNG4 842 aa10.31□□□□□ -0.76
USP30-206ENST00000479219 RNMTO43148 476 aaKnown RBP10.31□□□□□ -0.76
USP30-206ENST00000479219 TPM2P07951 284 aa10.31□□□□□ -0.76
USP30-206ENST00000479219 CHMLP26374 656 aa10.31□□□□□ -0.76
USP30-206ENST00000479219 MTX1Q13505 466 aa10.31□□□□□ -0.76
USP30-206ENST00000479219 BEND3Q5T5X7 828 aa10.31□□□□□ -0.76
USP30-206ENST00000479219 CHPF2Q9P2E5 772 aa10.31□□□□□ -0.76
USP30-206ENST00000479219 CYP2E1P05181 493 aaPredicted RBP10.3□□□□□ -0.76
USP30-206ENST00000479219 KLHL40Q2TBA0 621 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 PPP1R42Q7Z4L9 355 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 ERC1Q8IUD2 1116 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 PHAXQ9H814 394 aaKnown RBP10.3□□□□□ -0.76
USP30-206ENST00000479219 HYPKQ9NX55 129 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 TTC41PQ6P2S7 1318 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 USP42Q9H9J4 1324 aaKnown RBP10.3□□□□□ -0.76
USP30-206ENST00000479219 SURF6O75683 361 aaKnown RBP10.3□□□□□ -0.76
USP30-206ENST00000479219 ANKRD24Q8TF21 1146 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 TRIM44Q96DX7 344 aaPredicted RBP10.3□□□□□ -0.76
USP30-206ENST00000479219 LGR6Q9HBX8 967 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 C1orf167Q5SNV9 1468 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 BAG4O95429 457 aaKnown RBP10.3□□□□□ -0.76
USP30-206ENST00000479219 DDX58O95786 925 aaKnown RBP10.3□□□□□ -0.76
USP30-206ENST00000479219 EIF2S2P20042 333 aaKnown RBP10.3□□□□□ -0.76
USP30-206ENST00000479219 SSFA2P28290 1259 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 RHPN1Q8TCX5 695 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 INTS4Q96HW7 963 aaKnown RBP10.3□□□□□ -0.76
USP30-206ENST00000479219 RGPD5Q99666 1765 aa10.3□□□□□ -0.76
USP30-206ENST00000479219 PXDNQ92626 1479 aa10.29□□□□□ -0.76
USP30-206ENST00000479219 PI4KAP2A4QPH2 592 aa10.29□□□□□ -0.76
USP30-206ENST00000479219 CNTROBQ8N137 903 aa10.29□□□□□ -0.76
USP30-206ENST00000479219 PI4KAP1Q8N8J0 262 aa10.29□□□□□ -0.76
USP30-206ENST00000479219 RILPL2Q969X0 211 aa10.29□□□□□ -0.76
USP30-206ENST00000479219 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
USP30-206ENST00000479219 ADCY9O60503 1353 aa10.29□□□□□ -0.76
USP30-206ENST00000479219 ANO2Q9NQ90 1003 aa10.29□□□□□ -0.76
USP30-206ENST00000479219 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
USP30-206ENST00000479219 GIGYF1O75420 1035 aaPredicted RBP10.28□□□□□ -0.76
USP30-206ENST00000479219 NEK4P51957 841 aa10.28□□□□□ -0.76
USP30-206ENST00000479219 KSR2Q6VAB6 950 aa10.28□□□□□ -0.76
USP30-206ENST00000479219 C19orf44Q9H6X5 657 aa10.28□□□□□ -0.76
USP30-206ENST00000479219 KRT28Q7Z3Y7 464 aa10.28□□□□□ -0.76
USP30-206ENST00000479219 LRRC59Q96AG4 307 aaKnown RBP10.28□□□□□ -0.76
USP30-206ENST00000479219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.28□□□□□ -0.76
USP30-206ENST00000479219 ZBTB7CA1YPR0 619 aa10.27□□□□□ -0.76
USP30-206ENST00000479219 GLRX3O76003 335 aaKnown RBP10.27□□□□□ -0.76
USP30-206ENST00000479219 MPRIPQ6WCQ1 1025 aa10.27□□□□□ -0.76
USP30-206ENST00000479219 ERBB3P21860 1342 aa10.27□□□□□ -0.77
USP30-206ENST00000479219 ERBB4Q15303 1308 aa10.27□□□□□ -0.77
USP30-206ENST00000479219 CUL4AQ13619 759 aa10.27□□□□□ -0.77
USP30-206ENST00000479219 RUFY2Q8WXA3 655 aa10.27□□□□□ -0.77
USP30-206ENST00000479219 ORAI2Q96SN7 254 aa10.27□□□□□ -0.77
USP30-206ENST00000479219 DDX49Q9Y6V7 483 aaKnown RBP10.27□□□□□ -0.77
USP30-206ENST00000479219 NBPF7P0C2Y1 421 aaPredicted RBP10.27□□□□□ -0.77
USP30-206ENST00000479219 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
USP30-206ENST00000479219 CLASRPQ8N2M8 674 aaKnown RBP10.27□□□□□ -0.77
USP30-206ENST00000479219 LINS1Q8NG48 757 aa10.27□□□□□ -0.77
USP30-206ENST00000479219 C9orf78Q9NZ63 289 aaPredicted RBP10.27□□□□□ -0.77
USP30-206ENST00000479219 PARP4Q9UKK3 1724 aaKnown RBP10.26□□□□□ -0.77
USP30-206ENST00000479219 HSPA4P34932 840 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 PI4K2BQ8TCG2 481 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 RAPGEF4Q8WZA2 1011 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 DDX21Q9NR30 783 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP30-206ENST00000479219 MRC1P22897 1456 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 UTYO14607 1347 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 RAD50Q92878 1312 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 PKD1L3Q7Z443 1732 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 FGD1P98174 961 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 OS9Q13438 667 aaPredicted RBP10.26□□□□□ -0.77
USP30-206ENST00000479219 TMX3Q96JJ7 454 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 IL1RAPL2Q9NP60 686 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 SPG7Q9UQ90 795 aa10.26□□□□□ -0.77
USP30-206ENST00000479219 TSHZ3Q63HK5 1081 aa10.25□□□□□ -0.77
USP30-206ENST00000479219 KIAA1211Q6ZU35 1233 aa10.25□□□□□ -0.77
USP30-206ENST00000479219 ANP32BQ92688 251 aaKnown RBP10.25□□□□□ -0.77
USP30-206ENST00000479219 MAP3K2Q9Y2U5 619 aa10.25□□□□□ -0.77
USP30-206ENST00000479219 COL18A1P39060 1754 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms