RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 PIK3R5Q8WYR1 880 aa8.06□□□□□ -1.12
RC3H1-204ENST00000479099 DNAJC2Q99543 621 aaKnown RBP8.06□□□□□ -1.12
RC3H1-204ENST00000479099 KLHL42Q9P2K6 505 aa8.06□□□□□ -1.12
RC3H1-204ENST00000479099 MAGEC2Q9UBF1 373 aaPredicted RBP8.06□□□□□ -1.12
RC3H1-204ENST00000479099 MAFGO15525 162 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 IGBP1P78318 339 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 KRT76Q01546 638 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 NR1H3Q13133 447 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 RNF20Q5VTR2 975 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 SDE2Q6IQ49 451 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 MORC4Q8TE76 937 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 KCNB2Q92953 911 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 COL25A1Q9BXS0 654 aaPredicted RBP8.05□□□□□ -1.12
RC3H1-204ENST00000479099 TANGO6Q9C0B7 1094 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 BCL11AQ9H165 835 aa8.05□□□□□ -1.12
RC3H1-204ENST00000479099 SENP3-EIF4A1A0A087X0R7 540 aa8.04□□□□□ -1.12
RC3H1-204ENST00000479099 SOX11P35716 441 aa8.04□□□□□ -1.12
RC3H1-204ENST00000479099 TAGLNQ01995 201 aaKnown RBP8.04□□□□□ -1.12
RC3H1-204ENST00000479099 PTPROQ16827 1216 aa8.04□□□□□ -1.12
RC3H1-204ENST00000479099 STK32AQ8WU08 396 aa8.04□□□□□ -1.12
RC3H1-204ENST00000479099 CNTNAP3BQ96NU0 1288 aa8.04□□□□□ -1.12
RC3H1-204ENST00000479099 CNTNAP3Q9BZ76 1288 aa8.04□□□□□ -1.12
RC3H1-204ENST00000479099 TBX22Q9Y458 520 aa8.04□□□□□ -1.12
RC3H1-204ENST00000479099 hCG_2014768A0A024R1R8 64 aa8.03□□□□□ -1.12
RC3H1-204ENST00000479099 ATP5J2-PTCD1G3V325 749 aa8.03□□□□□ -1.12
RC3H1-204ENST00000479099 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
RC3H1-204ENST00000479099 HDLBPQ00341 1268 aaKnown RBP8.03□□□□□ -1.12
RC3H1-204ENST00000479099 SV2AQ7L0J3 742 aa8.03□□□□□ -1.12
RC3H1-204ENST00000479099 LYSMD3Q7Z3D4 306 aa8.03□□□□□ -1.12
RC3H1-204ENST00000479099 SPACA7Q96KW9 195 aa8.03□□□□□ -1.12
RC3H1-204ENST00000479099 BIN2Q9UBW5 565 aaPredicted RBP8.03□□□□□ -1.12
RC3H1-204ENST00000479099 CDC14CA4D256 554 aa8.02□□□□□ -1.13
RC3H1-204ENST00000479099 SCAMP3O14828 347 aaKnown RBP8.02□□□□□ -1.13
RC3H1-204ENST00000479099 SERPINB4P48594 390 aa8.02□□□□□ -1.13
RC3H1-204ENST00000479099 ERVK-9P63128 1117 aa8.02□□□□□ -1.13
RC3H1-204ENST00000479099 PSME1Q06323 249 aa8.02□□□□□ -1.13
RC3H1-204ENST00000479099 CCDC144BQ3MJ40 725 aa8.02□□□□□ -1.13
RC3H1-204ENST00000479099 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
RC3H1-204ENST00000479099 VWA5B2Q8N398 1253 aa8.02□□□□□ -1.13
RC3H1-204ENST00000479099 BRINP2Q9C0B6 783 aa8.02□□□□□ -1.13
RC3H1-204ENST00000479099 PARNO95453 639 aaKnown RBP8.01□□□□□ -1.13
RC3H1-204ENST00000479099 GPC1P35052 558 aa8.01□□□□□ -1.13
RC3H1-204ENST00000479099 TBC1D9Q6ZT07 1266 aa8.01□□□□□ -1.13
RC3H1-204ENST00000479099 ARMC5Q96C12 935 aa8.01□□□□□ -1.13
RC3H1-204ENST00000479099 BACH2Q9BYV9 841 aa8.01□□□□□ -1.13
RC3H1-204ENST00000479099 NOVA2Q9UNW9 492 aaKnown RBP8.01□□□□□ -1.13
RC3H1-204ENST00000479099 ATP9BO43861 1147 aa8□□□□□ -1.13
RC3H1-204ENST00000479099 MAP4K4O95819 1239 aaPredicted RBP8□□□□□ -1.13
RC3H1-204ENST00000479099 RAD51AP2Q09MP3 1159 aa8□□□□□ -1.13
RC3H1-204ENST00000479099 RNFT1Q5M7Z0 435 aa8□□□□□ -1.13
RC3H1-204ENST00000479099 SMC5Q8IY18 1101 aa8□□□□□ -1.13
RC3H1-204ENST00000479099 SLC43A3Q8NBI5 491 aa8□□□□□ -1.13
RC3H1-204ENST00000479099 CENPBP07199 599 aaPredicted RBP7.99□□□□□ -1.13
RC3H1-204ENST00000479099 ANAPC15P60006 121 aa7.99□□□□□ -1.13
RC3H1-204ENST00000479099 SPTY2D1Q68D10 685 aaPredicted RBP7.99□□□□□ -1.13
RC3H1-204ENST00000479099 PRICKLE2Q7Z3G6 844 aa7.99□□□□□ -1.13
RC3H1-204ENST00000479099 CYP2U1Q7Z449 544 aa7.99□□□□□ -1.13
RC3H1-204ENST00000479099 VTI1AQ96AJ9 217 aa7.99□□□□□ -1.13
RC3H1-204ENST00000479099 TINF2Q9BSI4 451 aa7.99□□□□□ -1.13
RC3H1-204ENST00000479099 SLAIN2Q9P270 581 aa7.99□□□□□ -1.13
RC3H1-204ENST00000479099 PRKAG2Q9UGJ0 569 aa7.99□□□□□ -1.13
RC3H1-204ENST00000479099 A0A1W2PRU2 124 aa7.98□□□□□ -1.13
RC3H1-204ENST00000479099 MEN1O00255 615 aa7.98□□□□□ -1.13
RC3H1-204ENST00000479099 LZTS3O60299 673 aaPredicted RBP7.98□□□□□ -1.13
RC3H1-204ENST00000479099 IBSPP21815 317 aaPredicted RBP7.98□□□□□ -1.13
RC3H1-204ENST00000479099 MRPL58Q14197 206 aaKnown RBP7.98□□□□□ -1.13
RC3H1-204ENST00000479099 COL19A1Q14993 1142 aa7.98□□□□□ -1.13
RC3H1-204ENST00000479099 NLGN1Q8N2Q7 840 aa7.98□□□□□ -1.13
RC3H1-204ENST00000479099 DHX38Q92620 1227 aaKnown RBP7.98□□□□□ -1.13
RC3H1-204ENST00000479099 NLRP2Q9NX02 1062 aa7.98□□□□□ -1.13
RC3H1-204ENST00000479099 PCDHB11Q9Y5F2 797 aa7.98□□□□□ -1.13
RC3H1-204ENST00000479099 CCDC194A0A1B0GVG4 234 aa7.97□□□□□ -1.13
RC3H1-204ENST00000479099 PEX14O75381 377 aa7.97□□□□□ -1.13
RC3H1-204ENST00000479099 EIF3JO75822 258 aaKnown RBP7.97□□□□□ -1.13
RC3H1-204ENST00000479099 SLURP2P0DP57 97 aa7.97□□□□□ -1.13
RC3H1-204ENST00000479099 SCTRP47872 440 aa7.97□□□□□ -1.13
RC3H1-204ENST00000479099 UBA5Q9GZZ9 404 aa7.97□□□□□ -1.13
RC3H1-204ENST00000479099 NOP58Q9Y2X3 529 aaKnown RBP7.97□□□□□ -1.13
RC3H1-204ENST00000479099 A0A0U1RQG5 324 aaPredicted RBP7.96□□□□□ -1.14
RC3H1-204ENST00000479099 HMGB1P1B2RPK0 211 aaPredicted RBP7.96□□□□□ -1.14
RC3H1-204ENST00000479099 RHOQP17081 205 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 ATP2B1P20020 1258 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 RALBP1Q15311 655 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 HSP90AB2PQ58FF8 381 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 C9orf131Q5VYM1 1079 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 ZNF385CQ66K41 422 aaPredicted RBP7.96□□□□□ -1.14
RC3H1-204ENST00000479099 APBB1IPQ7Z5R6 666 aaPredicted RBP7.96□□□□□ -1.14
RC3H1-204ENST00000479099 CLP1Q92989 425 aaKnown RBP7.96□□□□□ -1.14
RC3H1-204ENST00000479099 GMCL1Q96IK5 515 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 NLRP3Q96P20 1036 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 PLCD4Q9BRC7 762 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 ESF1Q9H501 851 aaKnown RBP7.96□□□□□ -1.14
RC3H1-204ENST00000479099 PIF1Q9H611 641 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 FAN1Q9Y2M0 1017 aa7.96□□□□□ -1.14
RC3H1-204ENST00000479099 FGD1P98174 961 aa7.95□□□□□ -1.14
RC3H1-204ENST00000479099 SEMA3FQ13275 785 aa7.95□□□□□ -1.14
RC3H1-204ENST00000479099 CLN3Q13286 438 aa7.95□□□□□ -1.14
RC3H1-204ENST00000479099 SVOPQ8N4V2 548 aa7.95□□□□□ -1.14
RC3H1-204ENST00000479099 ZCRB1Q8TBF4 217 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms