RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
CHD3-210ENST00000479080 BRPF1P55201 1214 aaPredicted RBP16.87■□□□□ 0.29
CHD3-210ENST00000479080 NBPF14Q5TI25 921 aa16.87■□□□□ 0.29
CHD3-210ENST00000479080 NBPF10Q6P3W6 841 aaKnown RBP16.87■□□□□ 0.29
CHD3-210ENST00000479080 NBPF15Q8N660 670 aa16.87■□□□□ 0.29
CHD3-210ENST00000479080 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
CHD3-210ENST00000479080 CHPF2Q9P2E5 772 aa16.87■□□□□ 0.29
CHD3-210ENST00000479080 SUPT16HQ9Y5B9 1047 aaKnown RBP16.87■□□□□ 0.29
CHD3-210ENST00000479080 KAT6BQ8WYB5 2073 aa16.86■□□□□ 0.29
CHD3-210ENST00000479080 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
CHD3-210ENST00000479080 PROM2Q8N271 834 aa16.86■□□□□ 0.29
CHD3-210ENST00000479080 LINC00116Q8NCU8 138 aa16.86■□□□□ 0.29
CHD3-210ENST00000479080 LRRC4BQ9NT99 713 aa16.86■□□□□ 0.29
CHD3-210ENST00000479080 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
CHD3-210ENST00000479080 PLIN1O60240 522 aa16.85■□□□□ 0.29
CHD3-210ENST00000479080 A1BGP04217 495 aa16.85■□□□□ 0.29
CHD3-210ENST00000479080 RRP1P56182 461 aaKnown RBP16.85■□□□□ 0.29
CHD3-210ENST00000479080 ATP6V1AP38606 617 aa16.84■□□□□ 0.29
CHD3-210ENST00000479080 CCDC30Q5VVM6 783 aa16.84■□□□□ 0.29
CHD3-210ENST00000479080 PHAXQ9H814 394 aaKnown RBP16.84■□□□□ 0.29
CHD3-210ENST00000479080 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
CHD3-210ENST00000479080 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
CHD3-210ENST00000479080 INTS5Q6P9B9 1019 aaKnown RBP16.83■□□□□ 0.28
CHD3-210ENST00000479080 TAF1LQ8IZX4 1826 aa16.83■□□□□ 0.28
CHD3-210ENST00000479080 ZBTB1Q9Y2K1 713 aa16.83■□□□□ 0.28
CHD3-210ENST00000479080 APBA3O96018 575 aa16.82■□□□□ 0.28
CHD3-210ENST00000479080 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
CHD3-210ENST00000479080 C20orf194Q5TEA3 1177 aa16.82■□□□□ 0.28
CHD3-210ENST00000479080 DDX21Q9NR30 783 aaKnown RBP eCLIP16.82■□□□□ 0.28
CHD3-210ENST00000479080 CCNL1Q9UK58 526 aaPredicted RBP16.82■□□□□ 0.28
CHD3-210ENST00000479080 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
CHD3-210ENST00000479080 ERBB4Q15303 1308 aa16.81■□□□□ 0.28
CHD3-210ENST00000479080 PLSCR1O15162 318 aa16.81■□□□□ 0.28
CHD3-210ENST00000479080 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
CHD3-210ENST00000479080 NOB1Q9ULX3 412 aaKnown RBP16.81■□□□□ 0.28
CHD3-210ENST00000479080 C4BP0C0L5 1744 aa16.8■□□□□ 0.28
CHD3-210ENST00000479080 CRKLP46109 303 aaKnown RBP16.8■□□□□ 0.28
CHD3-210ENST00000479080 TXNRD1Q16881 649 aa16.8■□□□□ 0.28
CHD3-210ENST00000479080 TEX13AQ9BXU3 409 aaPredicted RBP16.8■□□□□ 0.28
CHD3-210ENST00000479080 DBF4Q9UBU7 674 aaPredicted RBP16.8■□□□□ 0.28
CHD3-210ENST00000479080 CNTNAP4Q9C0A0 1308 aa16.79■□□□□ 0.28
CHD3-210ENST00000479080 RLBP1P12271 317 aa16.79■□□□□ 0.28
CHD3-210ENST00000479080 TRIM27P14373 513 aa16.79■□□□□ 0.28
CHD3-210ENST00000479080 FLIIQ13045 1269 aa16.79■□□□□ 0.28
CHD3-210ENST00000479080 CAMKK2Q96RR4 588 aa16.79■□□□□ 0.28
CHD3-210ENST00000479080 STK31Q9BXU1 1019 aa16.79■□□□□ 0.28
CHD3-210ENST00000479080 ADCY9O60503 1353 aa16.78■□□□□ 0.28
CHD3-210ENST00000479080 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
CHD3-210ENST00000479080 MYL6BP14649 208 aa16.78■□□□□ 0.28
CHD3-210ENST00000479080 SMIM5Q71RC9 77 aa16.78■□□□□ 0.28
CHD3-210ENST00000479080 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
CHD3-210ENST00000479080 CCDC87Q9NVE4 849 aa16.78■□□□□ 0.28
CHD3-210ENST00000479080 STARD3NLO95772 234 aa16.77■□□□□ 0.28
CHD3-210ENST00000479080 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.28
CHD3-210ENST00000479080 DEFB132Q7Z7B7 95 aa16.77■□□□□ 0.28
CHD3-210ENST00000479080 XAGE3Q8WTP9 111 aa16.77■□□□□ 0.28
CHD3-210ENST00000479080 ABCC4O15439 1325 aa16.76■□□□□ 0.27
CHD3-210ENST00000479080 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
CHD3-210ENST00000479080 EIF5P55010 431 aaKnown RBP16.76■□□□□ 0.27
CHD3-210ENST00000479080 IRX6P78412 446 aaPredicted RBP16.76■□□□□ 0.27
CHD3-210ENST00000479080 EN1Q05925 392 aaPredicted RBP16.76■□□□□ 0.27
CHD3-210ENST00000479080 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
CHD3-210ENST00000479080 SLC27A3Q5K4L6 730 aa16.76■□□□□ 0.27
CHD3-210ENST00000479080 ATF7IPQ6VMQ6 1270 aa16.76■□□□□ 0.27
CHD3-210ENST00000479080 NUP188Q5SRE5 1749 aa16.76■□□□□ 0.27
CHD3-210ENST00000479080 F6X3S4 739 aa16.75■□□□□ 0.27
CHD3-210ENST00000479080 ZNF827Q17R98 1081 aa16.75■□□□□ 0.27
CHD3-210ENST00000479080 ZKSCAN2Q63HK3 967 aa16.75■□□□□ 0.27
CHD3-210ENST00000479080 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
CHD3-210ENST00000479080 PANK1Q8TE04 598 aa16.75■□□□□ 0.27
CHD3-210ENST00000479080 ARHGAP45Q92619 1136 aa16.75■□□□□ 0.27
CHD3-210ENST00000479080 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
CHD3-210ENST00000479080 PTPRCP08575 1304 aa16.74■□□□□ 0.27
CHD3-210ENST00000479080 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
CHD3-210ENST00000479080 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
CHD3-210ENST00000479080 CLUAP1Q96AJ1 413 aa16.74■□□□□ 0.27
CHD3-210ENST00000479080 CACNA1FO60840 1977 aa16.73■□□□□ 0.27
CHD3-210ENST00000479080 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHD3-210ENST00000479080 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
CHD3-210ENST00000479080 COL15A1P39059 1388 aa16.73■□□□□ 0.27
CHD3-210ENST00000479080 UBR3Q6ZT12 1888 aa16.73■□□□□ 0.27
CHD3-210ENST00000479080 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
CHD3-210ENST00000479080 N4BP2Q86UW6 1770 aaPredicted RBP16.72■□□□□ 0.27
CHD3-210ENST00000479080 ARFGEF2Q9Y6D5 1785 aa16.72■□□□□ 0.27
CHD3-210ENST00000479080 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
CHD3-210ENST00000479080 FKBP5Q13451 457 aaPredicted RBP16.72■□□□□ 0.27
CHD3-210ENST00000479080 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
CHD3-210ENST00000479080 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
CHD3-210ENST00000479080 PXDNLA1KZ92 1463 aa16.72■□□□□ 0.27
CHD3-210ENST00000479080 C4AP0C0L4 1744 aa16.71■□□□□ 0.27
CHD3-210ENST00000479080 PI4KAP2A4QPH2 592 aa16.71■□□□□ 0.27
CHD3-210ENST00000479080 RPS6KA4O75676 772 aa16.71■□□□□ 0.27
CHD3-210ENST00000479080 TMEM57Q8N5G2 664 aa16.71■□□□□ 0.27
CHD3-210ENST00000479080 PI4KAP1Q8N8J0 262 aa16.71■□□□□ 0.27
CHD3-210ENST00000479080 API5Q9BZZ5 524 aaKnown RBP16.71■□□□□ 0.27
CHD3-210ENST00000479080 BCORQ6W2J9 1755 aa16.71■□□□□ 0.27
CHD3-210ENST00000479080 SCN7AQ01118 1682 aa16.7■□□□□ 0.26
CHD3-210ENST00000479080 GNPATO15228 680 aa16.7■□□□□ 0.26
CHD3-210ENST00000479080 PDE3AQ14432 1141 aa16.7■□□□□ 0.26
CHD3-210ENST00000479080 KSR2Q6VAB6 950 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms