RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 RREB1Q92766 1687 aa17.52■□□□□ 0.39
SMARCAL1-211ENST00000479008 STARD3NLO95772 234 aa17.51■□□□□ 0.39
SMARCAL1-211ENST00000479008 ALDH1L2Q3SY69 923 aa17.51■□□□□ 0.39
SMARCAL1-211ENST00000479008 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
SMARCAL1-211ENST00000479008 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
SMARCAL1-211ENST00000479008 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
SMARCAL1-211ENST00000479008 CYP19A1P11511 503 aaPredicted RBP17.5■□□□□ 0.39
SMARCAL1-211ENST00000479008 TXNRD1Q16881 649 aa17.5■□□□□ 0.39
SMARCAL1-211ENST00000479008 ILDR2Q71H61 639 aa17.5■□□□□ 0.39
SMARCAL1-211ENST00000479008 LINC00116Q8NCU8 138 aa17.5■□□□□ 0.39
SMARCAL1-211ENST00000479008 CHPF2Q9P2E5 772 aa17.5■□□□□ 0.39
SMARCAL1-211ENST00000479008 C4BP0C0L5 1744 aa17.5■□□□□ 0.39
SMARCAL1-211ENST00000479008 BCAR3O75815 825 aa17.49■□□□□ 0.39
SMARCAL1-211ENST00000479008 BAG6P46379 1132 aa17.49■□□□□ 0.39
SMARCAL1-211ENST00000479008 EN1Q05925 392 aaPredicted RBP17.49■□□□□ 0.39
SMARCAL1-211ENST00000479008 SLC27A3Q5K4L6 730 aa17.49■□□□□ 0.39
SMARCAL1-211ENST00000479008 LRRC4BQ9NT99 713 aa17.49■□□□□ 0.39
SMARCAL1-211ENST00000479008 ERBB4Q15303 1308 aa17.48■□□□□ 0.39
SMARCAL1-211ENST00000479008 ANXA1P04083 346 aa17.48■□□□□ 0.39
SMARCAL1-211ENST00000479008 A1BGP04217 495 aa17.48■□□□□ 0.39
SMARCAL1-211ENST00000479008 PIP4K2AP48426 406 aaPredicted RBP17.48■□□□□ 0.39
SMARCAL1-211ENST00000479008 CCDC125Q86Z20 511 aa17.48■□□□□ 0.39
SMARCAL1-211ENST00000479008 PROM2Q8N271 834 aa17.48■□□□□ 0.39
SMARCAL1-211ENST00000479008 MRPL50Q8N5N7 158 aaKnown RBP17.48■□□□□ 0.39
SMARCAL1-211ENST00000479008 DBF4Q9UBU7 674 aaPredicted RBP17.48■□□□□ 0.39
SMARCAL1-211ENST00000479008 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
SMARCAL1-211ENST00000479008 MYL6BP14649 208 aa17.47■□□□□ 0.39
SMARCAL1-211ENST00000479008 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
SMARCAL1-211ENST00000479008 EZH2Q15910 746 aaKnown RBP17.47■□□□□ 0.39
SMARCAL1-211ENST00000479008 PROSER3Q2NL68 480 aa17.47■□□□□ 0.39
SMARCAL1-211ENST00000479008 DEFB132Q7Z7B7 95 aa17.47■□□□□ 0.39
SMARCAL1-211ENST00000479008 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMARCAL1-211ENST00000479008 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
SMARCAL1-211ENST00000479008 NBPF26B4DH59 902 aa17.46■□□□□ 0.39
SMARCAL1-211ENST00000479008 PDIA6Q15084 440 aa17.46■□□□□ 0.39
SMARCAL1-211ENST00000479008 NBPF14Q5TI25 921 aa17.46■□□□□ 0.39
SMARCAL1-211ENST00000479008 NBPF10Q6P3W6 841 aaKnown RBP17.46■□□□□ 0.39
SMARCAL1-211ENST00000479008 NBPF15Q8N660 670 aa17.46■□□□□ 0.39
SMARCAL1-211ENST00000479008 CAMKK2Q96RR4 588 aa17.46■□□□□ 0.39
SMARCAL1-211ENST00000479008 CCDC87Q9NVE4 849 aa17.46■□□□□ 0.39
SMARCAL1-211ENST00000479008 ZBTB1Q9Y2K1 713 aa17.46■□□□□ 0.39
SMARCAL1-211ENST00000479008 CNTNAP4Q9C0A0 1308 aa17.46■□□□□ 0.38
SMARCAL1-211ENST00000479008 CANXP27824 592 aaKnown RBP17.45■□□□□ 0.38
SMARCAL1-211ENST00000479008 INTS5Q6P9B9 1019 aaKnown RBP17.45■□□□□ 0.38
SMARCAL1-211ENST00000479008 UPF1Q92900 1129 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMARCAL1-211ENST00000479008 UBR3Q6ZT12 1888 aa17.45■□□□□ 0.38
SMARCAL1-211ENST00000479008 G2E3Q7L622 706 aa17.44■□□□□ 0.38
SMARCAL1-211ENST00000479008 HYPKQ9NX55 129 aa17.44■□□□□ 0.38
SMARCAL1-211ENST00000479008 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
SMARCAL1-211ENST00000479008 TUBGCP6Q96RT7 1819 aa17.43■□□□□ 0.38
SMARCAL1-211ENST00000479008 BRPF1P55201 1214 aaPredicted RBP17.43■□□□□ 0.38
SMARCAL1-211ENST00000479008 RC3H1Q5TC82 1133 aaKnown RBP17.43■□□□□ 0.38
SMARCAL1-211ENST00000479008 FRAT1Q92837 279 aaPredicted RBP17.43■□□□□ 0.38
SMARCAL1-211ENST00000479008 PHAXQ9H814 394 aaKnown RBP17.43■□□□□ 0.38
SMARCAL1-211ENST00000479008 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
SMARCAL1-211ENST00000479008 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
SMARCAL1-211ENST00000479008 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
SMARCAL1-211ENST00000479008 FLIIQ13045 1269 aa17.42■□□□□ 0.38
SMARCAL1-211ENST00000479008 LRP10Q7Z4F1 713 aa17.42■□□□□ 0.38
SMARCAL1-211ENST00000479008 AK7Q96M32 723 aa17.42■□□□□ 0.38
SMARCAL1-211ENST00000479008 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
SMARCAL1-211ENST00000479008 ARFGEF2Q9Y6D5 1785 aa17.41■□□□□ 0.38
SMARCAL1-211ENST00000479008 GNPATO15228 680 aa17.41■□□□□ 0.38
SMARCAL1-211ENST00000479008 IL6STP40189 918 aaPredicted RBP17.41■□□□□ 0.38
SMARCAL1-211ENST00000479008 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
SMARCAL1-211ENST00000479008 XAGE3Q8WTP9 111 aa17.41■□□□□ 0.38
SMARCAL1-211ENST00000479008 RRP1P56182 461 aaKnown RBP17.4■□□□□ 0.38
SMARCAL1-211ENST00000479008 COPS6Q7L5N1 327 aa17.4■□□□□ 0.38
SMARCAL1-211ENST00000479008 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.4■□□□□ 0.38
SMARCAL1-211ENST00000479008 C4AP0C0L4 1744 aa17.4■□□□□ 0.38
SMARCAL1-211ENST00000479008 IPO8O15397 1037 aaKnown RBP17.39■□□□□ 0.37
SMARCAL1-211ENST00000479008 PLIN1O60240 522 aa17.39■□□□□ 0.37
SMARCAL1-211ENST00000479008 RPS6KA4O75676 772 aa17.39■□□□□ 0.37
SMARCAL1-211ENST00000479008 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
SMARCAL1-211ENST00000479008 FKBP5Q13451 457 aaPredicted RBP17.39■□□□□ 0.37
SMARCAL1-211ENST00000479008 ZKSCAN2Q63HK3 967 aa17.39■□□□□ 0.37
SMARCAL1-211ENST00000479008 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
SMARCAL1-211ENST00000479008 PTPRCP08575 1304 aa17.39■□□□□ 0.37
SMARCAL1-211ENST00000479008 COL15A1P39059 1388 aa17.39■□□□□ 0.37
SMARCAL1-211ENST00000479008 BCORQ6W2J9 1755 aa17.38■□□□□ 0.37
SMARCAL1-211ENST00000479008 ZNF827Q17R98 1081 aa17.38■□□□□ 0.37
SMARCAL1-211ENST00000479008 TTLL7Q6ZT98 887 aa17.38■□□□□ 0.37
SMARCAL1-211ENST00000479008 ARXQ96QS3 562 aa17.38■□□□□ 0.37
SMARCAL1-211ENST00000479008 RTCBQ9Y3I0 505 aaKnown RBP17.38■□□□□ 0.37
SMARCAL1-211ENST00000479008 NUP98P52948 1817 aa17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 AKT1S1Q96B36 256 aa17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 TNNQ9UQP3 1299 aa17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 QSER1Q2KHR3 1735 aa17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 RNF123Q5XPI4 1314 aa17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 N4BP2Q86UW6 1770 aaPredicted RBP17.37■□□□□ 0.37
SMARCAL1-211ENST00000479008 PHF14O94880 888 aa17.36■□□□□ 0.37
SMARCAL1-211ENST00000479008 TRIM27P14373 513 aa17.36■□□□□ 0.37
SMARCAL1-211ENST00000479008 KIF6Q6ZMV9 814 aa17.36■□□□□ 0.37
SMARCAL1-211ENST00000479008 AMIGO3Q86WK7 504 aa17.36■□□□□ 0.37
SMARCAL1-211ENST00000479008 ARHGAP45Q92619 1136 aa17.36■□□□□ 0.37
SMARCAL1-211ENST00000479008 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms