RNA–Protein interactions for RNA: ENST00000478527.1

SDK1-207, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 3

Gene SDK1, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-207ENST00000478527 BTBD11A6QL63 1104 aa20.9■□□□□ 0.94
SDK1-207ENST00000478527 GYS1P13807 737 aa20.9■□□□□ 0.94
SDK1-207ENST00000478527 RFC4P35249 363 aa20.9■□□□□ 0.94
SDK1-207ENST00000478527 NRXN2Q9P2S2 1712 aa20.9■□□□□ 0.94
SDK1-207ENST00000478527 KCNQ3O43525 872 aa20.89■□□□□ 0.93
SDK1-207ENST00000478527 MMP10P09238 476 aa20.89■□□□□ 0.93
SDK1-207ENST00000478527 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
SDK1-207ENST00000478527 SRP68Q9UHB9 627 aaKnown RBP20.89■□□□□ 0.93
SDK1-207ENST00000478527 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
SDK1-207ENST00000478527 CD2APQ9Y5K6 639 aa20.87■□□□□ 0.93
SDK1-207ENST00000478527 NLGN1Q8N2Q7 840 aa20.86■□□□□ 0.93
SDK1-207ENST00000478527 PXDNLA1KZ92 1463 aa20.86■□□□□ 0.93
SDK1-207ENST00000478527 STARD3NLO95772 234 aa20.85■□□□□ 0.93
SDK1-207ENST00000478527 THUMPD2Q9BTF0 503 aaKnown RBP20.85■□□□□ 0.93
SDK1-207ENST00000478527 DLEC1Q9Y238 1755 aa20.85■□□□□ 0.93
SDK1-207ENST00000478527 ZNF316A6NFI3 1004 aaPredicted RBP20.84■□□□□ 0.93
SDK1-207ENST00000478527 WDR43Q15061 677 aaKnown RBP eCLIP20.84■□□□□ 0.93
SDK1-207ENST00000478527 FKBP8Q14318 412 aa20.83■□□□□ 0.93
SDK1-207ENST00000478527 TEX13AQ9BXU3 409 aaPredicted RBP20.83■□□□□ 0.93
SDK1-207ENST00000478527 CANXP27824 592 aaKnown RBP20.82■□□□□ 0.92
SDK1-207ENST00000478527 CCDC146Q8IYE0 955 aa20.82■□□□□ 0.92
SDK1-207ENST00000478527 ARFGEF1Q9Y6D6 1849 aa20.81■□□□□ 0.92
SDK1-207ENST00000478527 EIF5P55010 431 aaKnown RBP20.81■□□□□ 0.92
SDK1-207ENST00000478527 DDR1Q08345 913 aa20.81■□□□□ 0.92
SDK1-207ENST00000478527 TAF7Q15545 349 aaPredicted RBP20.81■□□□□ 0.92
SDK1-207ENST00000478527 USPL1Q5W0Q7 1092 aa20.81■□□□□ 0.92
SDK1-207ENST00000478527 PELP1Q8IZL8 1130 aaKnown RBP20.81■□□□□ 0.92
SDK1-207ENST00000478527 NARFQ9UHQ1 456 aa20.81■□□□□ 0.92
SDK1-207ENST00000478527 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
SDK1-207ENST00000478527 GOLGB1Q14789 3259 aaKnown RBP20.8■□□□□ 0.92
SDK1-207ENST00000478527 PRAMEF22A3QJZ6 481 aa20.8■□□□□ 0.92
SDK1-207ENST00000478527 ZPR1O75312 459 aa20.8■□□□□ 0.92
SDK1-207ENST00000478527 TMPOP42166 694 aaKnown RBP20.8■□□□□ 0.92
SDK1-207ENST00000478527 GPR162Q16538 588 aa20.8■□□□□ 0.92
SDK1-207ENST00000478527 SNRPA1P09661 255 aaKnown RBP20.79■□□□□ 0.92
SDK1-207ENST00000478527 YBX3P16989 372 aaKnown RBP eCLIP20.79■□□□□ 0.92
SDK1-207ENST00000478527 PARP3Q9Y6F1 533 aa20.79■□□□□ 0.92
SDK1-207ENST00000478527 YY1P25490 414 aa20.78■□□□□ 0.92
SDK1-207ENST00000478527 IL6STP40189 918 aaPredicted RBP20.78■□□□□ 0.92
SDK1-207ENST00000478527 RIPK4P57078 832 aa20.78■□□□□ 0.92
SDK1-207ENST00000478527 LMOD3Q0VAK6 560 aa20.78■□□□□ 0.92
SDK1-207ENST00000478527 PNISRQ8TF01 805 aaKnown RBP20.78■□□□□ 0.92
SDK1-207ENST00000478527 MIS18AQ9NYP9 233 aa20.78■□□□□ 0.92
SDK1-207ENST00000478527 COL11A2P13942 1736 aaPredicted RBP20.78■□□□□ 0.92
SDK1-207ENST00000478527 A1BGP04217 495 aa20.77■□□□□ 0.92
SDK1-207ENST00000478527 RUNDC1Q96C34 613 aa20.77■□□□□ 0.92
SDK1-207ENST00000478527 BCL2L12Q9HB09 334 aa20.77■□□□□ 0.92
SDK1-207ENST00000478527 ADAMTS8Q9UP79 889 aa20.77■□□□□ 0.92
SDK1-207ENST00000478527 RRP7AQ9Y3A4 280 aaKnown RBP20.77■□□□□ 0.92
SDK1-207ENST00000478527 ZNF330Q9Y3S2 320 aaPredicted RBP20.77■□□□□ 0.92
SDK1-207ENST00000478527 A0A087WZG4 1122 aa20.76■□□□□ 0.91
SDK1-207ENST00000478527 POLRMTO00411 1230 aaKnown RBP20.76■□□□□ 0.91
SDK1-207ENST00000478527 USP16Q9Y5T5 823 aa20.76■□□□□ 0.91
SDK1-207ENST00000478527 UTRNP46939 3433 aa20.75■□□□□ 0.91
SDK1-207ENST00000478527 PIP4K2AP48426 406 aaPredicted RBP20.75■□□□□ 0.91
SDK1-207ENST00000478527 NFIXQ14938 502 aa20.75■□□□□ 0.91
SDK1-207ENST00000478527 NUP98P52948 1817 aa20.75■□□□□ 0.91
SDK1-207ENST00000478527 TM4SF1P30408 202 aa20.73■□□□□ 0.91
SDK1-207ENST00000478527 EIF4A1P60842 406 aaKnown RBP20.73■□□□□ 0.91
SDK1-207ENST00000478527 WWC3Q9ULE0 1092 aa20.73■□□□□ 0.91
SDK1-207ENST00000478527 TSPYL4Q9UJ04 414 aa20.72■□□□□ 0.91
SDK1-207ENST00000478527 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
SDK1-207ENST00000478527 CARMIL3Q8ND23 1372 aa20.72■□□□□ 0.91
SDK1-207ENST00000478527 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
SDK1-207ENST00000478527 NBPF26B4DH59 902 aa20.71■□□□□ 0.91
SDK1-207ENST00000478527 GIGYF1O75420 1035 aaPredicted RBP20.71■□□□□ 0.91
SDK1-207ENST00000478527 CAMTA2O94983 1202 aa20.71■□□□□ 0.91
SDK1-207ENST00000478527 NEUROD2Q15784 382 aa20.71■□□□□ 0.91
SDK1-207ENST00000478527 CCDC184Q52MB2 194 aa20.71■□□□□ 0.91
SDK1-207ENST00000478527 NBPF10Q6P3W6 841 aaKnown RBP20.71■□□□□ 0.91
SDK1-207ENST00000478527 NBPF15Q8N660 670 aa20.71■□□□□ 0.91
SDK1-207ENST00000478527 ANKRD36CQ5JPF3 1778 aa20.7■□□□□ 0.9
SDK1-207ENST00000478527 TGFB2P61812 414 aa20.7■□□□□ 0.9
SDK1-207ENST00000478527 DZIP3Q86Y13 1208 aaKnown RBP20.7■□□□□ 0.9
SDK1-207ENST00000478527 TRIM35Q9UPQ4 493 aa20.7■□□□□ 0.9
SDK1-207ENST00000478527 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
SDK1-207ENST00000478527 GRIN3BO60391 1043 aa20.69■□□□□ 0.9
SDK1-207ENST00000478527 NPM2Q86SE8 214 aaKnown RBP20.69■□□□□ 0.9
SDK1-207ENST00000478527 DPEP1P16444 411 aa20.68■□□□□ 0.9
SDK1-207ENST00000478527 TBC1D9BQ66K14 1250 aa20.68■□□□□ 0.9
SDK1-207ENST00000478527 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
SDK1-207ENST00000478527 A0A0G2JLW4 131 aa20.67■□□□□ 0.9
SDK1-207ENST00000478527 ANP32CO43423 234 aa20.67■□□□□ 0.9
SDK1-207ENST00000478527 BICDL1Q6ZP65 573 aa20.67■□□□□ 0.9
SDK1-207ENST00000478527 SERPINB2P05120 415 aa20.66■□□□□ 0.9
SDK1-207ENST00000478527 TNRC6CQ9HCJ0 1690 aaKnown RBP20.65■□□□□ 0.9
SDK1-207ENST00000478527 ERBB4Q15303 1308 aa20.64■□□□□ 0.89
SDK1-207ENST00000478527 APAF1O14727 1248 aa20.64■□□□□ 0.89
SDK1-207ENST00000478527 ADCY9O60503 1353 aa20.63■□□□□ 0.89
SDK1-207ENST00000478527 KCNA3P22001 575 aa20.63■□□□□ 0.89
SDK1-207ENST00000478527 CHRNA5P30532 468 aa20.63■□□□□ 0.89
SDK1-207ENST00000478527 MRS2Q9HD23 443 aa20.63■□□□□ 0.89
SDK1-207ENST00000478527 BCS1LQ9Y276 419 aa20.63■□□□□ 0.89
SDK1-207ENST00000478527 SBF1O95248 1867 aa20.62■□□□□ 0.89
SDK1-207ENST00000478527 ATP10DQ9P241 1426 aa20.62■□□□□ 0.89
SDK1-207ENST00000478527 CHL1O00533 1208 aa20.62■□□□□ 0.89
SDK1-207ENST00000478527 RGL2O15211 777 aa20.62■□□□□ 0.89
SDK1-207ENST00000478527 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
SDK1-207ENST00000478527 PRR5LQ6MZQ0 368 aa20.61■□□□□ 0.89
SDK1-207ENST00000478527 KRT24Q2M2I5 525 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 316.8 ms