RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 XP32Q5T750 250 aa8.17□□□□□ -1.1
HPS3-205ENST00000478525 NIFKQ9BYG3 293 aaKnown RBP8.17□□□□□ -1.1
HPS3-205ENST00000478525 DCDC2BA2VCK2 349 aa8.16□□□□□ -1.1
HPS3-205ENST00000478525 TMEM229AB2RXF0 380 aa8.16□□□□□ -1.1
HPS3-205ENST00000478525 K7ELQ4 463 aaPredicted RBP8.16□□□□□ -1.1
HPS3-205ENST00000478525 DGKGP49619 791 aa8.16□□□□□ -1.1
HPS3-205ENST00000478525 MAP7D1Q3KQU3 841 aa8.16□□□□□ -1.1
HPS3-205ENST00000478525 NLRP8Q86W28 1048 aa8.16□□□□□ -1.1
HPS3-205ENST00000478525 AIDAQ96BJ3 306 aa8.16□□□□□ -1.1
HPS3-205ENST00000478525 BTBD6Q96KE9 485 aa8.16□□□□□ -1.1
HPS3-205ENST00000478525 SERTAD1Q9UHV2 236 aa8.16□□□□□ -1.1
HPS3-205ENST00000478525 USP3Q9Y6I4 520 aa8.16□□□□□ -1.1
HPS3-205ENST00000478525 GNB5O14775 395 aa8.15□□□□□ -1.1
HPS3-205ENST00000478525 ATXN7O15265 892 aaPredicted RBP8.15□□□□□ -1.1
HPS3-205ENST00000478525 IQSEC3Q9UPP2 1182 aaPredicted RBP8.15□□□□□ -1.1
HPS3-205ENST00000478525 A0A1W2PNR3 127 aa8.14□□□□□ -1.11
HPS3-205ENST00000478525 MAPTP10636 758 aaKnown RBP8.14□□□□□ -1.11
HPS3-205ENST00000478525 CD33P20138 364 aa8.14□□□□□ -1.11
HPS3-205ENST00000478525 KLF15Q9UIH9 416 aa8.14□□□□□ -1.11
HPS3-205ENST00000478525 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
HPS3-205ENST00000478525 TNP2Q05952 138 aa8.13□□□□□ -1.11
HPS3-205ENST00000478525 MTFR1Q15390 333 aa8.13□□□□□ -1.11
HPS3-205ENST00000478525 WASHC4Q2M389 1173 aa8.13□□□□□ -1.11
HPS3-205ENST00000478525 NBPF1Q3BBV0 1214 aa8.13□□□□□ -1.11
HPS3-205ENST00000478525 ARSJQ5FYB0 599 aaPredicted RBP8.13□□□□□ -1.11
HPS3-205ENST00000478525 SLC4A9Q96Q91 983 aa8.13□□□□□ -1.11
HPS3-205ENST00000478525 A6NJY4 79 aa8.12□□□□□ -1.11
HPS3-205ENST00000478525 KHNYNO15037 678 aaKnown RBP8.12□□□□□ -1.11
HPS3-205ENST00000478525 FURINP09958 794 aa8.12□□□□□ -1.11
HPS3-205ENST00000478525 ADH6P28332 368 aa8.12□□□□□ -1.11
HPS3-205ENST00000478525 SEMA3FQ13275 785 aa8.12□□□□□ -1.11
HPS3-205ENST00000478525 TPRNQ4KMQ1 711 aa8.12□□□□□ -1.11
HPS3-205ENST00000478525 FAM182BQ5T319 152 aa8.12□□□□□ -1.11
HPS3-205ENST00000478525 CHSY3Q70JA7 882 aa8.12□□□□□ -1.11
HPS3-205ENST00000478525 FCHSD1Q86WN1 690 aa8.12□□□□□ -1.11
HPS3-205ENST00000478525 ZDHHC3Q9NYG2 299 aa8.12□□□□□ -1.11
HPS3-205ENST00000478525 C1QTNF9BB2RNN3 333 aa8.11□□□□□ -1.11
HPS3-205ENST00000478525 PIK3R2O00459 728 aa8.11□□□□□ -1.11
HPS3-205ENST00000478525 MCM6Q14566 821 aa8.11□□□□□ -1.11
HPS3-205ENST00000478525 ZIC5Q96T25 663 aa8.11□□□□□ -1.11
HPS3-205ENST00000478525 PCDHGA11Q9Y5H2 935 aa8.11□□□□□ -1.11
HPS3-205ENST00000478525 CDK2AP1O14519 115 aa8.1□□□□□ -1.11
HPS3-205ENST00000478525 FAM157BP0CG42 384 aa8.1□□□□□ -1.11
HPS3-205ENST00000478525 TATP17735 454 aaPredicted RBP8.1□□□□□ -1.11
HPS3-205ENST00000478525 SOX11P35716 441 aa8.1□□□□□ -1.11
HPS3-205ENST00000478525 CHRNA4P43681 627 aa8.1□□□□□ -1.11
HPS3-205ENST00000478525 CD163Q86VB7 1156 aa8.1□□□□□ -1.11
HPS3-205ENST00000478525 AVENQ9NQS1 362 aaPredicted RBP8.1□□□□□ -1.11
HPS3-205ENST00000478525 CABP1Q9NZU7 370 aa8.1□□□□□ -1.11
HPS3-205ENST00000478525 STRN4Q9NRL3 753 aa8.09□□□□□ -1.11
HPS3-205ENST00000478525 NOP53Q9NZM5 478 aaKnown RBP8.09□□□□□ -1.11
HPS3-205ENST00000478525 PARP3Q9Y6F1 533 aa8.09□□□□□ -1.11
HPS3-205ENST00000478525 PCBP4P57723 403 aaKnown RBP8.08□□□□□ -1.12
HPS3-205ENST00000478525 ZNF468Q5VIY5 522 aaPredicted RBP8.08□□□□□ -1.12
HPS3-205ENST00000478525 EFSO43281 561 aa8.07□□□□□ -1.12
HPS3-205ENST00000478525 TXLNAP40222 546 aa8.07□□□□□ -1.12
HPS3-205ENST00000478525 EML3Q32P44 896 aa8.07□□□□□ -1.12
HPS3-205ENST00000478525 SAMD5Q5TGI4 173 aa8.07□□□□□ -1.12
HPS3-205ENST00000478525 ZDHHC1Q8WTX9 485 aa8.07□□□□□ -1.12
HPS3-205ENST00000478525 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
HPS3-205ENST00000478525 GJA3Q9Y6H8 435 aa8.07□□□□□ -1.12
HPS3-205ENST00000478525 SKIP12755 728 aa8.06□□□□□ -1.12
HPS3-205ENST00000478525 GTF2IP78347 998 aa8.06□□□□□ -1.12
HPS3-205ENST00000478525 BICDL1Q6ZP65 573 aa8.06□□□□□ -1.12
HPS3-205ENST00000478525 TRIM11Q96F44 468 aa8.06□□□□□ -1.12
HPS3-205ENST00000478525 ZNF358Q9NW07 568 aa8.06□□□□□ -1.12
HPS3-205ENST00000478525 SCHIP1Q9P0W5 487 aaPredicted RBP8.06□□□□□ -1.12
HPS3-205ENST00000478525 COG6Q9Y2V7 657 aa8.06□□□□□ -1.12
HPS3-205ENST00000478525 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.05□□□□□ -1.12
HPS3-205ENST00000478525 MARK1Q9P0L2 795 aa8.05□□□□□ -1.12
HPS3-205ENST00000478525 PRR12Q9ULL5 1215 aa8.05□□□□□ -1.12
HPS3-205ENST00000478525 NOD1Q9Y239 953 aa8.05□□□□□ -1.12
HPS3-205ENST00000478525 BACH1O14867 736 aa8.04□□□□□ -1.12
HPS3-205ENST00000478525 EPHA4P54764 986 aa8.04□□□□□ -1.12
HPS3-205ENST00000478525 PSME1Q06323 249 aa8.04□□□□□ -1.12
HPS3-205ENST00000478525 NCOA4Q13772 614 aa8.04□□□□□ -1.12
HPS3-205ENST00000478525 LAMC2Q13753 1193 aa8.03□□□□□ -1.12
HPS3-205ENST00000478525 Q8N3U1 123 aa8.03□□□□□ -1.12
HPS3-205ENST00000478525 L3MBTL2Q969R5 705 aa8.03□□□□□ -1.12
HPS3-205ENST00000478525 ALG2Q9H553 416 aa8.03□□□□□ -1.12
HPS3-205ENST00000478525 TEAD4Q15561 434 aa8.02□□□□□ -1.13
HPS3-205ENST00000478525 TBCELQ5QJ74 424 aa8.02□□□□□ -1.13
HPS3-205ENST00000478525 LRRC69Q6ZNQ3 347 aa8.02□□□□□ -1.13
HPS3-205ENST00000478525 SLC9A9Q8IVB4 645 aa8.02□□□□□ -1.13
HPS3-205ENST00000478525 MDFIQ99750 246 aa8.02□□□□□ -1.13
HPS3-205ENST00000478525 PLVAPQ9BX97 442 aa8.02□□□□□ -1.13
HPS3-205ENST00000478525 ELOA3CA0A087WX78 387 aaPredicted RBP8.01□□□□□ -1.13
HPS3-205ENST00000478525 ELOA3DA6NLF2 546 aaPredicted RBP8.01□□□□□ -1.13
HPS3-205ENST00000478525 USP17L5A8MUK1 530 aa8.01□□□□□ -1.13
HPS3-205ENST00000478525 EML1O00423 815 aa8.01□□□□□ -1.13
HPS3-205ENST00000478525 ITGB7P26010 798 aa8.01□□□□□ -1.13
HPS3-205ENST00000478525 ELOA3BQ3SY89 546 aa8.01□□□□□ -1.13
HPS3-205ENST00000478525 SH3PXD2AQ5TCZ1 1133 aa8.01□□□□□ -1.13
HPS3-205ENST00000478525 SYT9Q86SS6 491 aa8.01□□□□□ -1.13
HPS3-205ENST00000478525 DEPDC4Q8N2C3 294 aa8.01□□□□□ -1.13
HPS3-205ENST00000478525 NFATC2IPQ8NCF5 419 aa8.01□□□□□ -1.13
HPS3-205ENST00000478525 ELOA3Q8NG57 546 aa8.01□□□□□ -1.13
HPS3-205ENST00000478525 LZTS3O60299 673 aaPredicted RBP8□□□□□ -1.13
HPS3-205ENST00000478525 NOS2P35228 1153 aa8□□□□□ -1.13
HPS3-205ENST00000478525 DOC2BQ14184 412 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms