RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 HEG1Q9ULI3 1381 aa18.34■□□□□ 0.53
SOX2-OT-208ENST00000477928 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
SOX2-OT-208ENST00000477928 USPL1Q5W0Q7 1092 aa18.34■□□□□ 0.53
SOX2-OT-208ENST00000477928 COL15A1P39059 1388 aa18.33■□□□□ 0.53
SOX2-OT-208ENST00000477928 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
SOX2-OT-208ENST00000477928 PIP4K2AP48426 406 aaPredicted RBP18.33■□□□□ 0.52
SOX2-OT-208ENST00000477928 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
SOX2-OT-208ENST00000477928 MIS18AQ9NYP9 233 aa18.33■□□□□ 0.52
SOX2-OT-208ENST00000477928 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.52
SOX2-OT-208ENST00000477928 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
SOX2-OT-208ENST00000477928 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
SOX2-OT-208ENST00000477928 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
SOX2-OT-208ENST00000477928 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
SOX2-OT-208ENST00000477928 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
SOX2-OT-208ENST00000477928 PRKRIP1Q9H875 184 aaPredicted RBP18.31■□□□□ 0.52
SOX2-OT-208ENST00000477928 A0A0G2JLW4 131 aa18.3■□□□□ 0.52
SOX2-OT-208ENST00000477928 A1BGP04217 495 aa18.3■□□□□ 0.52
SOX2-OT-208ENST00000477928 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
SOX2-OT-208ENST00000477928 ZNF784Q8NCA9 323 aaPredicted RBP18.29■□□□□ 0.52
SOX2-OT-208ENST00000477928 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
SOX2-OT-208ENST00000477928 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
SOX2-OT-208ENST00000477928 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
SOX2-OT-208ENST00000477928 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-208ENST00000477928 EIF5P55010 431 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-208ENST00000477928 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
SOX2-OT-208ENST00000477928 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
SOX2-OT-208ENST00000477928 PARP3Q9Y6F1 533 aa18.28■□□□□ 0.52
SOX2-OT-208ENST00000477928 KIAA1551Q9HCM1 1747 aa18.27■□□□□ 0.52
SOX2-OT-208ENST00000477928 ZPR1O75312 459 aa18.27■□□□□ 0.52
SOX2-OT-208ENST00000477928 DPEP1P16444 411 aa18.27■□□□□ 0.52
SOX2-OT-208ENST00000477928 TM4SF1P30408 202 aa18.27■□□□□ 0.52
SOX2-OT-208ENST00000477928 NFIXQ14938 502 aa18.27■□□□□ 0.52
SOX2-OT-208ENST00000477928 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
SOX2-OT-208ENST00000477928 TBC1D2BQ9UPU7 963 aa18.27■□□□□ 0.52
SOX2-OT-208ENST00000477928 STARD3NLO95772 234 aa18.26■□□□□ 0.51
SOX2-OT-208ENST00000477928 RRP7AQ9Y3A4 280 aaKnown RBP18.26■□□□□ 0.51
SOX2-OT-208ENST00000477928 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
SOX2-OT-208ENST00000477928 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
SOX2-OT-208ENST00000477928 TEX13AQ9BXU3 409 aaPredicted RBP18.25■□□□□ 0.51
SOX2-OT-208ENST00000477928 KCNA3P22001 575 aa18.24■□□□□ 0.51
SOX2-OT-208ENST00000477928 CHRNA5P30532 468 aa18.24■□□□□ 0.51
SOX2-OT-208ENST00000477928 CARMIL3Q8ND23 1372 aa18.24■□□□□ 0.51
SOX2-OT-208ENST00000477928 NBPF26B4DH59 902 aa18.23■□□□□ 0.51
SOX2-OT-208ENST00000477928 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
SOX2-OT-208ENST00000477928 NBPF10Q6P3W6 841 aaKnown RBP18.23■□□□□ 0.51
SOX2-OT-208ENST00000477928 NBPF15Q8N660 670 aa18.23■□□□□ 0.51
SOX2-OT-208ENST00000477928 DLG5Q8TDM6 1919 aa18.22■□□□□ 0.51
SOX2-OT-208ENST00000477928 GRIN3BO60391 1043 aa18.22■□□□□ 0.51
SOX2-OT-208ENST00000477928 TBC1D9BQ66K14 1250 aa18.22■□□□□ 0.51
SOX2-OT-208ENST00000477928 CCDC24Q8N4L8 307 aa18.22■□□□□ 0.51
SOX2-OT-208ENST00000477928 PNISRQ8TF01 805 aaKnown RBP18.22■□□□□ 0.51
SOX2-OT-208ENST00000477928 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
SOX2-OT-208ENST00000477928 WDR43Q15061 677 aaKnown RBP eCLIP18.21■□□□□ 0.51
SOX2-OT-208ENST00000477928 N4BP2Q86UW6 1770 aaPredicted RBP18.21■□□□□ 0.51
SOX2-OT-208ENST00000477928 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
SOX2-OT-208ENST00000477928 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
SOX2-OT-208ENST00000477928 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
SOX2-OT-208ENST00000477928 RIPK4P57078 832 aa18.2■□□□□ 0.5
SOX2-OT-208ENST00000477928 TGFB2P61812 414 aa18.2■□□□□ 0.5
SOX2-OT-208ENST00000477928 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
SOX2-OT-208ENST00000477928 KIF13BQ9NQT8 1826 aa18.2■□□□□ 0.5
SOX2-OT-208ENST00000477928 SERPINB2P05120 415 aa18.19■□□□□ 0.5
SOX2-OT-208ENST00000477928 TMPOP42166 694 aaKnown RBP18.19■□□□□ 0.5
SOX2-OT-208ENST00000477928 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
SOX2-OT-208ENST00000477928 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
SOX2-OT-208ENST00000477928 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
SOX2-OT-208ENST00000477928 EIF4A1P60842 406 aaKnown RBP18.18■□□□□ 0.5
SOX2-OT-208ENST00000477928 DZIP3Q86Y13 1208 aaKnown RBP18.18■□□□□ 0.5
SOX2-OT-208ENST00000477928 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
SOX2-OT-208ENST00000477928 SCN7AQ01118 1682 aa18.18■□□□□ 0.5
SOX2-OT-208ENST00000477928 A0A087WZG4 1122 aa18.17■□□□□ 0.5
SOX2-OT-208ENST00000477928 RUNDC1Q96C34 613 aa18.17■□□□□ 0.5
SOX2-OT-208ENST00000477928 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
SOX2-OT-208ENST00000477928 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
SOX2-OT-208ENST00000477928 ADCY9O60503 1353 aa18.16■□□□□ 0.5
SOX2-OT-208ENST00000477928 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
SOX2-OT-208ENST00000477928 ANP32CO43423 234 aa18.15■□□□□ 0.5
SOX2-OT-208ENST00000477928 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
SOX2-OT-208ENST00000477928 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
SOX2-OT-208ENST00000477928 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.5
SOX2-OT-208ENST00000477928 KRT24Q2M2I5 525 aa18.14■□□□□ 0.49
SOX2-OT-208ENST00000477928 PRR5LQ6MZQ0 368 aa18.14■□□□□ 0.49
SOX2-OT-208ENST00000477928 ZNF526Q8TF50 670 aaPredicted RBP18.14■□□□□ 0.49
SOX2-OT-208ENST00000477928 TSPYL4Q9UJ04 414 aa18.14■□□□□ 0.49
SOX2-OT-208ENST00000477928 NRXN2Q9P2S2 1712 aa18.14■□□□□ 0.49
SOX2-OT-208ENST00000477928 ARHGAP27Q6ZUM4 889 aa18.13■□□□□ 0.49
SOX2-OT-208ENST00000477928 PIM2Q9P1W9 311 aa18.13■□□□□ 0.49
SOX2-OT-208ENST00000477928 CHD4Q14839 1912 aa18.13■□□□□ 0.49
SOX2-OT-208ENST00000477928 HLFQ16534 295 aa18.12■□□□□ 0.49
SOX2-OT-208ENST00000477928 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
SOX2-OT-208ENST00000477928 MYL6BP14649 208 aa18.11■□□□□ 0.49
SOX2-OT-208ENST00000477928 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
SOX2-OT-208ENST00000477928 TTLL7Q6ZT98 887 aa18.11■□□□□ 0.49
SOX2-OT-208ENST00000477928 C2CD5Q86YS7 1000 aa18.11■□□□□ 0.49
SOX2-OT-208ENST00000477928 FAM177BA6PVY3 158 aa18.1■□□□□ 0.49
SOX2-OT-208ENST00000477928 ANXA1P04083 346 aa18.1■□□□□ 0.49
SOX2-OT-208ENST00000477928 PROSER3Q2NL68 480 aa18.1■□□□□ 0.49
SOX2-OT-208ENST00000477928 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
SOX2-OT-208ENST00000477928 NECTIN2Q92692 538 aa18.1■□□□□ 0.49
SOX2-OT-208ENST00000477928 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms