RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CRKLP46109 303 aaKnown RBP10.34□□□□□ -0.75
SPTLC1-205ENST00000477888 ERFEQ4G0M1 354 aa10.34□□□□□ -0.75
SPTLC1-205ENST00000477888 EYA1Q99502 592 aa10.34□□□□□ -0.75
SPTLC1-205ENST00000477888 ITGB4P16144 1822 aa10.34□□□□□ -0.75
SPTLC1-205ENST00000477888 RASSF10A6NK89 507 aa10.33□□□□□ -0.76
SPTLC1-205ENST00000477888 DDNO94850 711 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1-205ENST00000477888 MAP2K1Q02750 393 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1-205ENST00000477888 LDHDQ86WU2 507 aa10.33□□□□□ -0.76
SPTLC1-205ENST00000477888 CARD11Q9BXL7 1154 aa10.33□□□□□ -0.76
SPTLC1-205ENST00000477888 NFIXQ14938 502 aa10.32□□□□□ -0.76
SPTLC1-205ENST00000477888 DEFB115Q30KQ5 88 aa10.32□□□□□ -0.76
SPTLC1-205ENST00000477888 INTS5Q6P9B9 1019 aaKnown RBP10.32□□□□□ -0.76
SPTLC1-205ENST00000477888 TESK2Q96S53 571 aa10.32□□□□□ -0.76
SPTLC1-205ENST00000477888 SIN3AQ96ST3 1273 aa10.32□□□□□ -0.76
SPTLC1-205ENST00000477888 EMILIN1Q9Y6C2 1016 aa10.32□□□□□ -0.76
SPTLC1-205ENST00000477888 WDR33Q9C0J8 1336 aaKnown RBP10.32□□□□□ -0.76
SPTLC1-205ENST00000477888 USPL1Q5W0Q7 1092 aa10.31□□□□□ -0.76
SPTLC1-205ENST00000477888 C2CD5Q86YS7 1000 aa10.31□□□□□ -0.76
SPTLC1-205ENST00000477888 L3MBTL3Q96JM7 780 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-205ENST00000477888 TAF1DQ9H5J8 278 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-205ENST00000477888 IQCA1LA6NCM1 817 aa10.3□□□□□ -0.76
SPTLC1-205ENST00000477888 H0YIN7 160 aa10.3□□□□□ -0.76
SPTLC1-205ENST00000477888 PTCD1O75127 700 aaKnown RBP10.3□□□□□ -0.76
SPTLC1-205ENST00000477888 ZPR1O75312 459 aa10.3□□□□□ -0.76
SPTLC1-205ENST00000477888 SERPINB2P05120 415 aa10.3□□□□□ -0.76
SPTLC1-205ENST00000477888 WASHC2AQ641Q2 1341 aa10.3□□□□□ -0.76
SPTLC1-205ENST00000477888 C21orf2O43822 256 aa10.29□□□□□ -0.76
SPTLC1-205ENST00000477888 LTBP3Q9NS15 1303 aa10.29□□□□□ -0.76
SPTLC1-205ENST00000477888 ZNF831Q5JPB2 1677 aa10.28□□□□□ -0.76
SPTLC1-205ENST00000477888 CABP4P57796 275 aa10.28□□□□□ -0.76
SPTLC1-205ENST00000477888 BCL2L12Q9HB09 334 aa10.28□□□□□ -0.76
SPTLC1-205ENST00000477888 NARFQ9UHQ1 456 aa10.28□□□□□ -0.76
SPTLC1-205ENST00000477888 PPM1GO15355 546 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1-205ENST00000477888 HSP90AB1P08238 724 aaKnown RBP10.27□□□□□ -0.77
SPTLC1-205ENST00000477888 NEUROD1Q13562 356 aa10.27□□□□□ -0.77
SPTLC1-205ENST00000477888 CNTROBQ8N137 903 aa10.27□□□□□ -0.77
SPTLC1-205ENST00000477888 TAOK3Q9H2K8 898 aa10.27□□□□□ -0.77
SPTLC1-205ENST00000477888 SOS1Q07889 1333 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1-205ENST00000477888 ST20-MTHFSA0A0A6YYL1 179 aa10.26□□□□□ -0.77
SPTLC1-205ENST00000477888 TNRC18O15417 2968 aaPredicted RBP10.26□□□□□ -0.77
SPTLC1-205ENST00000477888 NFATC2IPQ8NCF5 419 aa10.26□□□□□ -0.77
SPTLC1-205ENST00000477888 MCOLN1Q9GZU1 580 aa10.26□□□□□ -0.77
SPTLC1-205ENST00000477888 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
SPTLC1-205ENST00000477888 MYH14Q7Z406 1995 aaKnown RBP10.26□□□□□ -0.77
SPTLC1-205ENST00000477888 CARMIL3Q8ND23 1372 aa10.26□□□□□ -0.77
SPTLC1-205ENST00000477888 EAPPQ56P03 285 aaPredicted RBP10.25□□□□□ -0.77
SPTLC1-205ENST00000477888 MAP1SQ66K74 1059 aaPredicted RBP10.25□□□□□ -0.77
SPTLC1-205ENST00000477888 DNAJC10Q8IXB1 793 aa10.25□□□□□ -0.77
SPTLC1-205ENST00000477888 ZNF622Q969S3 477 aaKnown RBP eCLIP10.25□□□□□ -0.772e-11■■□□□ 12.6
SPTLC1-205ENST00000477888 CFAP44Q96MT7 982 aa10.25□□□□□ -0.77
SPTLC1-205ENST00000477888 GPR101Q96P66 508 aaPredicted RBP10.25□□□□□ -0.77
SPTLC1-205ENST00000477888 BEGAINQ9BUH8 593 aa10.25□□□□□ -0.77
SPTLC1-205ENST00000477888 BRIP1Q9BX63 1249 aa10.25□□□□□ -0.77
SPTLC1-205ENST00000477888 ABT1Q9ULW3 272 aaKnown RBP10.25□□□□□ -0.77
SPTLC1-205ENST00000477888 PDZRN3Q9UPQ7 1066 aa10.25□□□□□ -0.77
SPTLC1-205ENST00000477888 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
SPTLC1-205ENST00000477888 PNMA8AQ86V59 439 aaPredicted RBP10.24□□□□□ -0.77
SPTLC1-205ENST00000477888 CAPNS2Q96L46 248 aa10.24□□□□□ -0.77
SPTLC1-205ENST00000477888 CARD14Q9BXL6 1004 aa10.24□□□□□ -0.77
SPTLC1-205ENST00000477888 HACL1Q9UJ83 578 aa10.24□□□□□ -0.77
SPTLC1-205ENST00000477888 CLEC11AQ9Y240 323 aa10.24□□□□□ -0.77
SPTLC1-205ENST00000477888 CYP19A1P11511 503 aaPredicted RBP10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 EPHX2P34913 555 aa10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 PDE6BP35913 854 aa10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 ECE1P42892 770 aa10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 MTHFSP49914 203 aa10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 EIF4A2Q14240 407 aaKnown RBP10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 PLEKHO1Q53GL0 409 aaPredicted RBP10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 DDX21Q9NR30 783 aaKnown RBP eCLIP10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 POLKQ9UBT6 870 aa10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 TSKSQ9UJT2 592 aa10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 TIAM2Q8IVF5 1701 aa10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 VIRMAQ69YN4 1812 aaKnown RBP10.23□□□□□ -0.77
SPTLC1-205ENST00000477888 ADAMTS7Q9UKP4 1686 aa10.22□□□□□ -0.77
SPTLC1-205ENST00000477888 MAP2K2P36507 400 aa10.22□□□□□ -0.77
SPTLC1-205ENST00000477888 AMOTQ4VCS5 1084 aa10.22□□□□□ -0.77
SPTLC1-205ENST00000477888 CYP4F22Q6NT55 531 aa10.22□□□□□ -0.77
SPTLC1-205ENST00000477888 ZNF530Q6P9A1 599 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1-205ENST00000477888 C7orf43Q8WVR3 580 aa10.22□□□□□ -0.77
SPTLC1-205ENST00000477888 ZNF541Q9H0D2 1346 aa10.22□□□□□ -0.77
SPTLC1-205ENST00000477888 SOGA3Q5TF21 947 aa10.21□□□□□ -0.77
SPTLC1-205ENST00000477888 CST9Q5W186 159 aa10.21□□□□□ -0.77
SPTLC1-205ENST00000477888 BICDL1Q6ZP65 573 aa10.21□□□□□ -0.77
SPTLC1-205ENST00000477888 CNKSR1Q969H4 720 aa10.21□□□□□ -0.77
SPTLC1-205ENST00000477888 ZBTB1Q9Y2K1 713 aa10.21□□□□□ -0.77
SPTLC1-205ENST00000477888 COL15A1P39059 1388 aa10.21□□□□□ -0.78
SPTLC1-205ENST00000477888 NRXN2Q9P2S2 1712 aa10.21□□□□□ -0.78
SPTLC1-205ENST00000477888 CA12O43570 354 aa10.2□□□□□ -0.78
SPTLC1-205ENST00000477888 SRGNP10124 158 aa10.2□□□□□ -0.78
SPTLC1-205ENST00000477888 FMR1Q06787 632 aaKnown RBP eCLIP10.2□□□□□ -0.78
SPTLC1-205ENST00000477888 DGKZQ13574 1117 aa10.2□□□□□ -0.78
SPTLC1-205ENST00000477888 PRPF38BQ5VTL8 546 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-205ENST00000477888 STYK1Q6J9G0 422 aa10.2□□□□□ -0.78
SPTLC1-205ENST00000477888 PRR5LQ6MZQ0 368 aa10.2□□□□□ -0.78
SPTLC1-205ENST00000477888 PRPF40BQ6NWY9 871 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-205ENST00000477888 CCDC24Q8N4L8 307 aa10.2□□□□□ -0.78
SPTLC1-205ENST00000477888 RNF123Q5XPI4 1314 aa10.19□□□□□ -0.78
SPTLC1-205ENST00000477888 FZD9O00144 591 aa10.19□□□□□ -0.78
SPTLC1-205ENST00000477888 AOC2O75106 756 aa10.19□□□□□ -0.78
SPTLC1-205ENST00000477888 EIF5P55010 431 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms