RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 MAP3K12Q12852 859 aa21.62■■□□□ 1.05
VARS2-209ENST00000477288 ARHGEF11O15085 1522 aa21.62■■□□□ 1.05
VARS2-209ENST00000477288 FERMT3Q86UX7 667 aa21.62■■□□□ 1.05
VARS2-209ENST00000477288 CCDC82Q8N4S0 544 aa21.62■■□□□ 1.05
VARS2-209ENST00000477288 CTNNBL1Q8WYA6 563 aaPredicted RBP21.62■■□□□ 1.05
VARS2-209ENST00000477288 GOPCQ9HD26 462 aa21.62■■□□□ 1.05
VARS2-209ENST00000477288 CTCFLQ8NI51 663 aaPredicted RBP21.62■■□□□ 1.05
VARS2-209ENST00000477288 CCDC178Q5BJE1 867 aa21.61■■□□□ 1.05
VARS2-209ENST00000477288 NGLY1Q96IV0 654 aa21.61■■□□□ 1.05
VARS2-209ENST00000477288 CCDC141Q6ZP82 1450 aa21.61■■□□□ 1.05
VARS2-209ENST00000477288 CACNA2D4Q7Z3S7 1137 aa21.61■■□□□ 1.05
VARS2-209ENST00000477288 MAP3K11Q16584 847 aa21.6■■□□□ 1.05
VARS2-209ENST00000477288 MX1P20591 662 aa21.6■■□□□ 1.05
VARS2-209ENST00000477288 FKBP15Q5T1M5 1219 aa21.6■■□□□ 1.05
VARS2-209ENST00000477288 RAB11FIP3O75154 756 aa21.59■■□□□ 1.05
VARS2-209ENST00000477288 GLRX3O76003 335 aaKnown RBP21.59■■□□□ 1.05
VARS2-209ENST00000477288 CRACR2AQ9BSW2 395 aa21.59■■□□□ 1.05
VARS2-209ENST00000477288 MACROD2A1Z1Q3 448 aa21.59■■□□□ 1.05
VARS2-209ENST00000477288 C6orf229H3BNL8 230 aa21.59■■□□□ 1.05
VARS2-209ENST00000477288 UBXN4Q92575 508 aa21.59■■□□□ 1.05
VARS2-209ENST00000477288 PLB1Q6P1J6 1458 aa21.59■■□□□ 1.05
VARS2-209ENST00000477288 CUL7Q14999 1698 aa21.59■■□□□ 1.05
VARS2-209ENST00000477288 GSTTP1A0A1W2PQM5 241 aa21.59■■□□□ 1.05
VARS2-209ENST00000477288 PCF11O94913 1555 aaKnown RBP21.58■■□□□ 1.05
VARS2-209ENST00000477288 TNNT1P13805 278 aa21.58■■□□□ 1.05
VARS2-209ENST00000477288 TAF7Q15545 349 aaPredicted RBP21.58■■□□□ 1.05
VARS2-209ENST00000477288 SYCE3A1L190 88 aa21.58■■□□□ 1.04
VARS2-209ENST00000477288 ANKRD18BA2A2Z9 1011 aa21.58■■□□□ 1.04
VARS2-209ENST00000477288 IQCA1Q86XH1 822 aa21.58■■□□□ 1.04
VARS2-209ENST00000477288 CCDC8Q9H0W5 538 aaPredicted RBP21.58■■□□□ 1.04
VARS2-209ENST00000477288 CCDC196A0A1B0GTZ2 297 aa21.57■■□□□ 1.04
VARS2-209ENST00000477288 GPTP24298 496 aa21.57■■□□□ 1.04
VARS2-209ENST00000477288 SLC12A7Q9Y666 1083 aa21.57■■□□□ 1.04
VARS2-209ENST00000477288 GUCY1B3Q02153 619 aa21.57■■□□□ 1.04
VARS2-209ENST00000477288 SLF2Q8IX21 1173 aa21.57■■□□□ 1.04
VARS2-209ENST00000477288 TMEM266Q2M3C6 531 aa21.57■■□□□ 1.04
VARS2-209ENST00000477288 AMOTQ4VCS5 1084 aa21.57■■□□□ 1.04
VARS2-209ENST00000477288 TRMT1LQ7Z2T5 733 aaKnown RBP21.57■■□□□ 1.04
VARS2-209ENST00000477288 TMX1Q9H3N1 280 aa21.57■■□□□ 1.04
VARS2-209ENST00000477288 GRIN2AQ12879 1464 aa21.57■■□□□ 1.04
VARS2-209ENST00000477288 IL27Q8NEV9 243 aa21.56■■□□□ 1.04
VARS2-209ENST00000477288 CCDC150Q8NCX0 1101 aa21.56■■□□□ 1.04
VARS2-209ENST00000477288 EHMT1Q9H9B1 1298 aa21.56■■□□□ 1.04
VARS2-209ENST00000477288 PSMD1Q99460 953 aa21.56■■□□□ 1.04
VARS2-209ENST00000477288 CASQ1P31415 396 aa21.56■■□□□ 1.04
VARS2-209ENST00000477288 BCCIPQ9P287 314 aaKnown RBP eCLIP21.56■■□□□ 1.04
VARS2-209ENST00000477288 FEZ1Q99689 392 aa21.55■■□□□ 1.04
VARS2-209ENST00000477288 ZNF213O14771 459 aa21.55■■□□□ 1.04
VARS2-209ENST00000477288 UBE4AQ14139 1066 aa21.55■■□□□ 1.04
VARS2-209ENST00000477288 TMCO3Q6UWJ1 677 aa21.55■■□□□ 1.04
VARS2-209ENST00000477288 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.55■■□□□ 1.04
VARS2-209ENST00000477288 LUZP1Q86V48 1076 aa21.55■■□□□ 1.04
VARS2-209ENST00000477288 NLRP5P59047 1200 aa21.55■■□□□ 1.04
VARS2-209ENST00000477288 IFFO1Q0D2I5 559 aa21.55■■□□□ 1.04
VARS2-209ENST00000477288 RAB34Q9BZG1 259 aa21.55■■□□□ 1.04
VARS2-209ENST00000477288 USP8P40818 1118 aa21.54■■□□□ 1.04
VARS2-209ENST00000477288 C8orf76Q96K31 380 aa21.54■■□□□ 1.04
VARS2-209ENST00000477288 EXOC5O00471 708 aa21.54■■□□□ 1.04
VARS2-209ENST00000477288 STAMBPO95630 424 aa21.54■■□□□ 1.04
VARS2-209ENST00000477288 FOXO3O43524 673 aa21.54■■□□□ 1.04
VARS2-209ENST00000477288 SSRP1Q08945 709 aaKnown RBP21.54■■□□□ 1.04
VARS2-209ENST00000477288 COMMD10Q9Y6G5 202 aa21.54■■□□□ 1.04
VARS2-209ENST00000477288 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.54■■□□□ 1.04
VARS2-209ENST00000477288 ABCC5O15440 1437 aa21.54■■□□□ 1.04
VARS2-209ENST00000477288 MAP3K1Q13233 1512 aa21.53■■□□□ 1.04
VARS2-209ENST00000477288 NF2P35240 595 aa21.53■■□□□ 1.04
VARS2-209ENST00000477288 CCDC194A0A1B0GVG4 234 aa21.53■■□□□ 1.04
VARS2-209ENST00000477288 VPS36Q86VN1 386 aa21.53■■□□□ 1.04
VARS2-209ENST00000477288 NME9Q86XW9 330 aa21.53■■□□□ 1.04
VARS2-209ENST00000477288 ZBTB3Q9H5J0 574 aa21.53■■□□□ 1.04
VARS2-209ENST00000477288 CAMSAP2Q08AD1 1489 aa21.53■■□□□ 1.04
VARS2-209ENST00000477288 IFIT3O14879 490 aaKnown RBP21.52■■□□□ 1.04
VARS2-209ENST00000477288 KIF5CO60282 957 aa21.52■■□□□ 1.04
VARS2-209ENST00000477288 MAPK8IP2Q13387 824 aaPredicted RBP21.52■■□□□ 1.04
VARS2-209ENST00000477288 PHAXQ9H814 394 aaKnown RBP21.52■■□□□ 1.04
VARS2-209ENST00000477288 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
VARS2-209ENST00000477288 SHTN1A0MZ66 631 aa21.52■■□□□ 1.04
VARS2-209ENST00000477288 GOLGA8AA7E2F4 631 aa21.52■■□□□ 1.04
VARS2-209ENST00000477288 GOLGA8BA8MQT2 603 aa21.52■■□□□ 1.04
VARS2-209ENST00000477288 SFPQP23246 707 aaKnown RBP eCLIP21.52■■□□□ 1.04
VARS2-209ENST00000477288 SLC4A8Q2Y0W8 1093 aa21.52■■□□□ 1.04
VARS2-209ENST00000477288 F6X3S4 739 aa21.52■■□□□ 1.04
VARS2-209ENST00000477288 CPLX3Q8WVH0 158 aa21.52■■□□□ 1.04
VARS2-209ENST00000477288 PHF8Q9UPP1 1060 aa21.52■■□□□ 1.04
VARS2-209ENST00000477288 KIF4BQ2VIQ3 1234 aa21.52■■□□□ 1.03
VARS2-209ENST00000477288 CD109Q6YHK3 1445 aa21.51■■□□□ 1.03
VARS2-209ENST00000477288 CTNNA2P26232 953 aa21.51■■□□□ 1.03
VARS2-209ENST00000477288 TDRD12Q587J7 1177 aaKnown RBP21.51■■□□□ 1.03
VARS2-209ENST00000477288 ZNF622Q969S3 477 aaKnown RBP eCLIP21.51■■□□□ 1.03
VARS2-209ENST00000477288 RNF41Q9H4P4 317 aaPredicted RBP21.51■■□□□ 1.03
VARS2-209ENST00000477288 HOOK3Q86VS8 718 aa21.51■■□□□ 1.03
VARS2-209ENST00000477288 CATIPQ7Z7H3 387 aa21.51■■□□□ 1.03
VARS2-209ENST00000477288 A0A087WZG4 1122 aa21.51■■□□□ 1.03
VARS2-209ENST00000477288 NUP88Q99567 741 aaPredicted RBP21.51■■□□□ 1.03
VARS2-209ENST00000477288 GBP3Q9H0R5 595 aa21.51■■□□□ 1.03
VARS2-209ENST00000477288 PTPN14Q15678 1187 aa21.5■■□□□ 1.03
VARS2-209ENST00000477288 BACH2Q9BYV9 841 aa21.5■■□□□ 1.03
VARS2-209ENST00000477288 VAT1LQ9HCJ6 419 aa21.5■■□□□ 1.03
VARS2-209ENST00000477288 ZSCAN12O43309 604 aa21.5■■□□□ 1.03
VARS2-209ENST00000477288 BAG4O95429 457 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms