RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 TPCN2Q8NHX9 752 aa9.64□□□□□ -0.87
CDKN1B-204ENST00000477087 C1orf216Q8TAB5 229 aa9.64□□□□□ -0.87
CDKN1B-204ENST00000477087 DNAAF2Q9NVR5 837 aaKnown RBP9.64□□□□□ -0.87
CDKN1B-204ENST00000477087 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
CDKN1B-204ENST00000477087 IGF1RP08069 1367 aa9.63□□□□□ -0.87
CDKN1B-204ENST00000477087 CCDC102BQ68D86 513 aa9.63□□□□□ -0.87
CDKN1B-204ENST00000477087 CFHR5Q9BXR6 569 aa9.63□□□□□ -0.87
CDKN1B-204ENST00000477087 TFIP11Q9UBB9 837 aaKnown RBP9.63□□□□□ -0.87
CDKN1B-204ENST00000477087 TATP17735 454 aaPredicted RBP9.62□□□□□ -0.87
CDKN1B-204ENST00000477087 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
CDKN1B-204ENST00000477087 WHAMMQ8TF30 809 aa9.62□□□□□ -0.87
CDKN1B-204ENST00000477087 CRISPLD1Q9H336 500 aa9.62□□□□□ -0.87
CDKN1B-204ENST00000477087 IQSEC3Q9UPP2 1182 aaPredicted RBP9.62□□□□□ -0.87
CDKN1B-204ENST00000477087 THBS1P07996 1170 aa9.61□□□□□ -0.87
CDKN1B-204ENST00000477087 CLDN10P78369 228 aa9.61□□□□□ -0.87
CDKN1B-204ENST00000477087 LARGE2Q8N3Y3 721 aa9.61□□□□□ -0.87
CDKN1B-204ENST00000477087 KIAA1024Q9UPX6 916 aa9.61□□□□□ -0.87
CDKN1B-204ENST00000477087 USP3Q9Y6I4 520 aa9.61□□□□□ -0.87
CDKN1B-204ENST00000477087 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
CDKN1B-204ENST00000477087 ARSJQ5FYB0 599 aaPredicted RBP9.6□□□□□ -0.87
CDKN1B-204ENST00000477087 FIGNL1Q6PIW4 674 aa9.6□□□□□ -0.87
CDKN1B-204ENST00000477087 LYPD4Q6UWN0 246 aa9.6□□□□□ -0.87
CDKN1B-204ENST00000477087 ZDHHC3Q9NYG2 299 aa9.6□□□□□ -0.87
CDKN1B-204ENST00000477087 SCHIP1Q9P0W5 487 aaPredicted RBP9.6□□□□□ -0.87
CDKN1B-204ENST00000477087 ADAMTS8Q9UP79 889 aa9.6□□□□□ -0.87
CDKN1B-204ENST00000477087 MAFBQ9Y5Q3 323 aaPredicted RBP9.6□□□□□ -0.87
CDKN1B-204ENST00000477087 ZBTB7BO15156 539 aaPredicted RBP9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 CELA2BP08218 269 aaPredicted RBP9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 ATP4AP20648 1035 aa9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 MAP2K3P46734 347 aa9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 SLC9A9Q8IVB4 645 aa9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 TNS4Q8IZW8 715 aa9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 ZNF594Q96JF6 807 aaPredicted RBP9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 ENAMQ9NRM1 1142 aa9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 ATXN7L1Q9ULK2 861 aaPredicted RBP9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 GJA3Q9Y6H8 435 aa9.59□□□□□ -0.87
CDKN1B-204ENST00000477087 CC2D2AQ9P2K1 1620 aa9.58□□□□□ -0.88
CDKN1B-204ENST00000477087 RASA1P20936 1047 aa9.58□□□□□ -0.88
CDKN1B-204ENST00000477087 MARSP56192 900 aaKnown RBP9.58□□□□□ -0.88
CDKN1B-204ENST00000477087 NLRP8Q86W28 1048 aa9.58□□□□□ -0.88
CDKN1B-204ENST00000477087 PPP1R12CQ9BZL4 782 aa9.58□□□□□ -0.88
CDKN1B-204ENST00000477087 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
CDKN1B-204ENST00000477087 PARP3Q9Y6F1 533 aa9.58□□□□□ -0.88
CDKN1B-204ENST00000477087 RNF225M0QZC1 329 aaPredicted RBP9.57□□□□□ -0.88
CDKN1B-204ENST00000477087 TEAD4Q15561 434 aa9.57□□□□□ -0.88
CDKN1B-204ENST00000477087 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
CDKN1B-204ENST00000477087 BICDL1Q6ZP65 573 aa9.57□□□□□ -0.88
CDKN1B-204ENST00000477087 ZNF295-AS1Q8N0V1 137 aa9.57□□□□□ -0.88
CDKN1B-204ENST00000477087 SIX5Q8N196 739 aa9.57□□□□□ -0.88
CDKN1B-204ENST00000477087 ABHD17AQ96GS6 310 aa9.57□□□□□ -0.88
CDKN1B-204ENST00000477087 ZNF232Q9UNY5 417 aa9.57□□□□□ -0.88
CDKN1B-204ENST00000477087 A0A1W2PNR3 127 aa9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 M0R2N6 131 aa9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 ARHGEF15O94989 841 aa9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 FGFR3P22607 806 aa9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 EPHA4P54764 986 aa9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 FOXK2Q01167 660 aa9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 UBAP2LQ14157 1087 aaKnown RBP9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 TBCELQ5QJ74 424 aa9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 ZNF777Q9ULD5 760 aaPredicted RBP9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 PCDHGC4Q9Y5F7 938 aa9.56□□□□□ -0.88
CDKN1B-204ENST00000477087 ATXN7O15265 892 aaPredicted RBP9.55□□□□□ -0.88
CDKN1B-204ENST00000477087 BCRP11274 1271 aa9.55□□□□□ -0.88
CDKN1B-204ENST00000477087 BMP4P12644 408 aa9.55□□□□□ -0.88
CDKN1B-204ENST00000477087 NOS2P35228 1153 aa9.55□□□□□ -0.88
CDKN1B-204ENST00000477087 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
CDKN1B-204ENST00000477087 ZCCHC2Q9C0B9 1178 aaKnown RBP9.55□□□□□ -0.88
CDKN1B-204ENST00000477087 CFTRP13569 1480 aa9.54□□□□□ -0.88
CDKN1B-204ENST00000477087 CADPSQ9ULU8 1353 aa9.54□□□□□ -0.88
CDKN1B-204ENST00000477087 SERTM1A2A2V5 107 aa9.54□□□□□ -0.88
CDKN1B-204ENST00000477087 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
CDKN1B-204ENST00000477087 BNIP3LO60238 219 aa9.54□□□□□ -0.88
CDKN1B-204ENST00000477087 LMOD1P29536 600 aaPredicted RBP9.54□□□□□ -0.88
CDKN1B-204ENST00000477087 TXLNAP40222 546 aa9.54□□□□□ -0.88
CDKN1B-204ENST00000477087 ZDHHC1Q8WTX9 485 aa9.54□□□□□ -0.88
CDKN1B-204ENST00000477087 ACDQ96AP0 544 aa9.54□□□□□ -0.88
CDKN1B-204ENST00000477087 SEC13P55735 322 aa9.53□□□□□ -0.88
CDKN1B-204ENST00000477087 PSMA6P60900 246 aaKnown RBP9.53□□□□□ -0.88
CDKN1B-204ENST00000477087 NEDD1Q8NHV4 660 aa9.53□□□□□ -0.88
CDKN1B-204ENST00000477087 ZIC5Q96T25 663 aa9.53□□□□□ -0.88
CDKN1B-204ENST00000477087 OXCT2Q9BYC2 517 aaPredicted RBP9.53□□□□□ -0.88
CDKN1B-204ENST00000477087 TSPAN10Q9H1Z9 355 aaPredicted RBP9.53□□□□□ -0.88
CDKN1B-204ENST00000477087 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
CDKN1B-204ENST00000477087 NEUROD4Q9HD90 331 aa9.53□□□□□ -0.88
CDKN1B-204ENST00000477087 NDFIP2Q9NV92 336 aa9.53□□□□□ -0.88
CDKN1B-204ENST00000477087 TSEN2Q8NCE0 465 aaKnown RBP9.52□□□□□ -0.89
CDKN1B-204ENST00000477087 KLRG1Q96E93 195 aa9.52□□□□□ -0.89
CDKN1B-204ENST00000477087 SCARF2Q96GP6 870 aaPredicted RBP9.52□□□□□ -0.89
CDKN1B-204ENST00000477087 DCDC2BA2VCK2 349 aa9.51□□□□□ -0.89
CDKN1B-204ENST00000477087 KHNYNO15037 678 aaKnown RBP9.51□□□□□ -0.89
CDKN1B-204ENST00000477087 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
CDKN1B-204ENST00000477087 GDF2Q9UK05 429 aaPredicted RBP9.51□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L15C9J2P7 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L13C9JLJ4 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L11C9JVI0 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L21D6R901 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L18D6R9N7 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L22D6RA61 530 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms