RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
SPTAN1-207ENST00000476825 PTCD1O75127 700 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-207ENST00000476825 KCNQ4P56696 695 aa11.86□□□□□ -0.51
SPTAN1-207ENST00000476825 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
SPTAN1-207ENST00000476825 SLFN5Q08AF3 891 aa11.86□□□□□ -0.51
SPTAN1-207ENST00000476825 KRT24Q2M2I5 525 aa11.86□□□□□ -0.51
SPTAN1-207ENST00000476825 FMNL2Q96PY5 1086 aa11.86□□□□□ -0.51
SPTAN1-207ENST00000476825 CCNL1Q9UK58 526 aaPredicted RBP11.86□□□□□ -0.51
SPTAN1-207ENST00000476825 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
SPTAN1-207ENST00000476825 DNAJC10Q8IXB1 793 aa11.85□□□□□ -0.51
SPTAN1-207ENST00000476825 LINC00116Q8NCU8 138 aa11.85□□□□□ -0.51
SPTAN1-207ENST00000476825 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
SPTAN1-207ENST00000476825 LAS1LQ9Y4W2 734 aaKnown RBP11.85□□□□□ -0.51
SPTAN1-207ENST00000476825 CNTNAP4Q9C0A0 1308 aa11.85□□□□□ -0.51
SPTAN1-207ENST00000476825 E9PSI1 815 aa11.84□□□□□ -0.51
SPTAN1-207ENST00000476825 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
SPTAN1-207ENST00000476825 ANO8Q9HCE9 1232 aaPredicted RBP11.84□□□□□ -0.51
SPTAN1-207ENST00000476825 HOXB7P09629 217 aa11.83□□□□□ -0.52
SPTAN1-207ENST00000476825 CYP19A1P11511 503 aaPredicted RBP11.83□□□□□ -0.52
SPTAN1-207ENST00000476825 ZNF827Q17R98 1081 aa11.83□□□□□ -0.52
SPTAN1-207ENST00000476825 DUSP27Q5VZP5 1158 aa11.83□□□□□ -0.52
SPTAN1-207ENST00000476825 C8orf58Q8NAV2 365 aa11.83□□□□□ -0.52
SPTAN1-207ENST00000476825 MYH16Q9H6N6 1097 aa11.83□□□□□ -0.52
SPTAN1-207ENST00000476825 AFDNP55196 1824 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-207ENST00000476825 SNRPA1P09661 255 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-207ENST00000476825 TSPYL6Q8N831 410 aa11.82□□□□□ -0.52
SPTAN1-207ENST00000476825 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
SPTAN1-207ENST00000476825 USP16Q9Y5T5 823 aa11.82□□□□□ -0.52
SPTAN1-207ENST00000476825 SOS1Q07889 1333 aaPredicted RBP11.82□□□□□ -0.52
SPTAN1-207ENST00000476825 EXOSC9Q06265 439 aaKnown RBP11.81□□□□□ -0.52
SPTAN1-207ENST00000476825 INTS5Q6P9B9 1019 aaKnown RBP11.81□□□□□ -0.52
SPTAN1-207ENST00000476825 AMIGO3Q86WK7 504 aa11.81□□□□□ -0.52
SPTAN1-207ENST00000476825 CRKLP46109 303 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-207ENST00000476825 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-207ENST00000476825 LRP10Q7Z4F1 713 aa11.8□□□□□ -0.52
SPTAN1-207ENST00000476825 TEX13AQ9BXU3 409 aaPredicted RBP11.8□□□□□ -0.52
SPTAN1-207ENST00000476825 ZBTB1Q9Y2K1 713 aa11.8□□□□□ -0.52
SPTAN1-207ENST00000476825 ERBB4Q15303 1308 aa11.8□□□□□ -0.52
SPTAN1-207ENST00000476825 NBPF26B4DH59 902 aa11.79□□□□□ -0.52
SPTAN1-207ENST00000476825 TWISTNBQ3B726 338 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-207ENST00000476825 NBPF14Q5TI25 921 aa11.79□□□□□ -0.52
SPTAN1-207ENST00000476825 NBPF10Q6P3W6 841 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-207ENST00000476825 NBPF15Q8N660 670 aa11.79□□□□□ -0.52
SPTAN1-207ENST00000476825 YTHDC1Q96MU7 727 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-207ENST00000476825 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
SPTAN1-207ENST00000476825 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
SPTAN1-207ENST00000476825 COL15A1P39059 1388 aa11.79□□□□□ -0.52
SPTAN1-207ENST00000476825 LAMB2P55268 1798 aa11.78□□□□□ -0.52
SPTAN1-207ENST00000476825 VAMP4O75379 141 aa11.78□□□□□ -0.52
SPTAN1-207ENST00000476825 PDIA6Q15084 440 aa11.78□□□□□ -0.52
SPTAN1-207ENST00000476825 SLC15A2Q16348 729 aa11.78□□□□□ -0.52
SPTAN1-207ENST00000476825 PNPLA7Q6ZV29 1317 aa11.78□□□□□ -0.52
SPTAN1-207ENST00000476825 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.53
SPTAN1-207ENST00000476825 STARD3NLO95772 234 aa11.77□□□□□ -0.53
SPTAN1-207ENST00000476825 A1BGP04217 495 aa11.77□□□□□ -0.53
SPTAN1-207ENST00000476825 PROSER3Q2NL68 480 aa11.77□□□□□ -0.53
SPTAN1-207ENST00000476825 HDGFL1Q5TGJ6 251 aa11.77□□□□□ -0.53
SPTAN1-207ENST00000476825 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 GNPATO15228 680 aa11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 RPS6KA4O75676 772 aa11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 HMGB2P26583 209 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 PIP4K2AP48426 406 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 EIF5P55010 431 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 AK7Q96M32 723 aa11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
SPTAN1-207ENST00000476825 LRP5O75197 1615 aa11.75□□□□□ -0.53
SPTAN1-207ENST00000476825 EIF2S2P20042 333 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-207ENST00000476825 SSFA2P28290 1259 aa11.75□□□□□ -0.53
SPTAN1-207ENST00000476825 SMIM5Q71RC9 77 aa11.75□□□□□ -0.53
SPTAN1-207ENST00000476825 CHPF2Q9P2E5 772 aa11.75□□□□□ -0.53
SPTAN1-207ENST00000476825 KIAA1551Q9HCM1 1747 aa11.74□□□□□ -0.53
SPTAN1-207ENST00000476825 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
SPTAN1-207ENST00000476825 ANXA1P04083 346 aa11.74□□□□□ -0.53
SPTAN1-207ENST00000476825 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
SPTAN1-207ENST00000476825 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
SPTAN1-207ENST00000476825 DDX21Q9NR30 783 aaKnown RBP eCLIP11.74□□□□□ -0.53
SPTAN1-207ENST00000476825 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-207ENST00000476825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 MYH3P11055 1940 aa11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 CANXP27824 592 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 CCDC30Q5VVM6 783 aa11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 ZNF428Q96B54 188 aa11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 PDGFDQ9GZP0 370 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 USP42Q9H9J4 1324 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 DBF4Q9UBU7 674 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-207ENST00000476825 DLEC1Q9Y238 1755 aa11.72□□□□□ -0.53
SPTAN1-207ENST00000476825 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-207ENST00000476825 TFCP2L1Q9NZI6 479 aa11.72□□□□□ -0.53
SPTAN1-207ENST00000476825 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 PXDNLA1KZ92 1463 aa11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 TCERG1O14776 1098 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 PHF14O94880 888 aa11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 MYL6BP14649 208 aa11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 R3HDM1Q15032 1099 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 ALDH1L2Q3SY69 923 aa11.71□□□□□ -0.53
SPTAN1-207ENST00000476825 G2E3Q7L622 706 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms