RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 WWC3Q9ULE0 1092 aa14.39□□□□□ -0.11
SEC13-214ENST00000476597 TJP1Q07157 1748 aa14.38□□□□□ -0.11
SEC13-214ENST00000476597 CICQ96RK0 1608 aaPredicted RBP14.38□□□□□ -0.11
SEC13-214ENST00000476597 POLRMTO00411 1230 aaKnown RBP14.38□□□□□ -0.11
SEC13-214ENST00000476597 DPEP1P16444 411 aa14.38□□□□□ -0.11
SEC13-214ENST00000476597 MCM10Q7L590 875 aa14.38□□□□□ -0.11
SEC13-214ENST00000476597 BCL2L12Q9HB09 334 aa14.38□□□□□ -0.11
SEC13-214ENST00000476597 C10orf71Q711Q0 1435 aa14.38□□□□□ -0.11
SEC13-214ENST00000476597 COL15A1P39059 1388 aa14.37□□□□□ -0.11
SEC13-214ENST00000476597 KCNA3P22001 575 aa14.37□□□□□ -0.11
SEC13-214ENST00000476597 PXDNLA1KZ92 1463 aa14.37□□□□□ -0.11
SEC13-214ENST00000476597 A0A087WZG4 1122 aa14.36□□□□□ -0.11
SEC13-214ENST00000476597 DCTN1Q14203 1278 aa14.36□□□□□ -0.11
SEC13-214ENST00000476597 NFIXQ14938 502 aa14.36□□□□□ -0.11
SEC13-214ENST00000476597 RALBP1Q15311 655 aa14.36□□□□□ -0.11
SEC13-214ENST00000476597 PLEKHF1Q96S99 279 aa14.36□□□□□ -0.11
SEC13-214ENST00000476597 A1BGP04217 495 aa14.35□□□□□ -0.11
SEC13-214ENST00000476597 IL6STP40189 918 aaPredicted RBP14.35□□□□□ -0.11
SEC13-214ENST00000476597 DDX10Q13206 875 aaKnown RBP14.35□□□□□ -0.11
SEC13-214ENST00000476597 BCS1LQ9Y276 419 aa14.35□□□□□ -0.11
SEC13-214ENST00000476597 USP16Q9Y5T5 823 aa14.35□□□□□ -0.11
SEC13-214ENST00000476597 NEFMP07197 916 aa14.34□□□□□ -0.11
SEC13-214ENST00000476597 TAF7Q15545 349 aaPredicted RBP14.34□□□□□ -0.11
SEC13-214ENST00000476597 CHD4Q14839 1912 aa14.34□□□□□ -0.11
SEC13-214ENST00000476597 C4AP0C0L4 1744 aa14.33□□□□□ -0.12
SEC13-214ENST00000476597 SNRPA1P09661 255 aaKnown RBP14.33□□□□□ -0.12
SEC13-214ENST00000476597 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
SEC13-214ENST00000476597 PIM2Q9P1W9 311 aa14.33□□□□□ -0.12
SEC13-214ENST00000476597 PRAMEF22A3QJZ6 481 aa14.32□□□□□ -0.12
SEC13-214ENST00000476597 SERPINB2P05120 415 aa14.32□□□□□ -0.12
SEC13-214ENST00000476597 TBC1D2BQ9UPU7 963 aa14.32□□□□□ -0.12
SEC13-214ENST00000476597 CHRNA5P30532 468 aa14.31□□□□□ -0.12
SEC13-214ENST00000476597 C1QTNF8P60827 252 aa14.31□□□□□ -0.12
SEC13-214ENST00000476597 NFE2L2Q16236 605 aa14.31□□□□□ -0.12
SEC13-214ENST00000476597 ARHGAP27Q6ZUM4 889 aa14.31□□□□□ -0.12
SEC13-214ENST00000476597 MIS18AQ9NYP9 233 aa14.31□□□□□ -0.12
SEC13-214ENST00000476597 UBR2Q8IWV8 1755 aa14.31□□□□□ -0.12
SEC13-214ENST00000476597 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
SEC13-214ENST00000476597 GIGYF1O75420 1035 aaPredicted RBP14.3□□□□□ -0.12
SEC13-214ENST00000476597 DALRD3Q5D0E6 543 aaKnown RBP14.3□□□□□ -0.12
SEC13-214ENST00000476597 TBC1D9BQ66K14 1250 aa14.3□□□□□ -0.12
SEC13-214ENST00000476597 NPM2Q86SE8 214 aaKnown RBP14.3□□□□□ -0.12
SEC13-214ENST00000476597 ZNF330Q9Y3S2 320 aaPredicted RBP14.3□□□□□ -0.12
SEC13-214ENST00000476597 ADCY9O60503 1353 aa14.3□□□□□ -0.12
SEC13-214ENST00000476597 KIF13BQ9NQT8 1826 aa14.29□□□□□ -0.12
SEC13-214ENST00000476597 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
SEC13-214ENST00000476597 BICDL1Q6ZP65 573 aa14.29□□□□□ -0.12
SEC13-214ENST00000476597 PNISRQ8TF01 805 aaKnown RBP14.29□□□□□ -0.12
SEC13-214ENST00000476597 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
SEC13-214ENST00000476597 DZIP3Q86Y13 1208 aaKnown RBP14.28□□□□□ -0.12
SEC13-214ENST00000476597 GPBP1L1Q9HC44 474 aaPredicted RBP14.28□□□□□ -0.12
SEC13-214ENST00000476597 MAPK8IP3Q9UPT6 1336 aa14.28□□□□□ -0.12
SEC13-214ENST00000476597 SIPA1L3O60292 1781 aaPredicted RBP14.27□□□□□ -0.12
SEC13-214ENST00000476597 KIAA1551Q9HCM1 1747 aa14.27□□□□□ -0.12
SEC13-214ENST00000476597 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.12
SEC13-214ENST00000476597 NBPF26B4DH59 902 aa14.27□□□□□ -0.13
SEC13-214ENST00000476597 NBPF10Q6P3W6 841 aaKnown RBP14.27□□□□□ -0.13
SEC13-214ENST00000476597 NBPF15Q8N660 670 aa14.27□□□□□ -0.13
SEC13-214ENST00000476597 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.13
SEC13-214ENST00000476597 VIRMAQ69YN4 1812 aaKnown RBP14.27□□□□□ -0.13
SEC13-214ENST00000476597 EIF4A1P60842 406 aaKnown RBP14.26□□□□□ -0.13
SEC13-214ENST00000476597 CLEC4GQ6UXB4 293 aa14.26□□□□□ -0.13
SEC13-214ENST00000476597 SETDB2Q96T68 719 aa14.26□□□□□ -0.13
SEC13-214ENST00000476597 H0YIN7 160 aa14.25□□□□□ -0.13
SEC13-214ENST00000476597 RIPK4P57078 832 aa14.25□□□□□ -0.13
SEC13-214ENST00000476597 PRR5LQ6MZQ0 368 aa14.25□□□□□ -0.13
SEC13-214ENST00000476597 C2CD5Q86YS7 1000 aa14.25□□□□□ -0.13
SEC13-214ENST00000476597 ZNF526Q8TF50 670 aaPredicted RBP14.25□□□□□ -0.13
SEC13-214ENST00000476597 BRIP1Q9BX63 1249 aa14.25□□□□□ -0.13
SEC13-214ENST00000476597 PDZRN3Q9UPQ7 1066 aa14.25□□□□□ -0.13
SEC13-214ENST00000476597 N4BP2Q86UW6 1770 aaPredicted RBP14.24□□□□□ -0.13
SEC13-214ENST00000476597 RGL2O15211 777 aa14.24□□□□□ -0.13
SEC13-214ENST00000476597 TTLL6Q8N841 843 aa14.24□□□□□ -0.13
SEC13-214ENST00000476597 CARMIL3Q8ND23 1372 aa14.23□□□□□ -0.13
SEC13-214ENST00000476597 PDE6BP35913 854 aa14.23□□□□□ -0.13
SEC13-214ENST00000476597 TMPOP42166 694 aaKnown RBP14.23□□□□□ -0.13
SEC13-214ENST00000476597 C9orf131Q5VYM1 1079 aa14.23□□□□□ -0.13
SEC13-214ENST00000476597 CCDC24Q8N4L8 307 aa14.23□□□□□ -0.13
SEC13-214ENST00000476597 PRKRIP1Q9H875 184 aaPredicted RBP14.22□□□□□ -0.13
SEC13-214ENST00000476597 BABAM1Q9NWV8 329 aa14.22□□□□□ -0.13
SEC13-214ENST00000476597 ZNF652Q9Y2D9 606 aa14.22□□□□□ -0.13
SEC13-214ENST00000476597 CEP350Q5VT06 3117 aa14.21□□□□□ -0.13
SEC13-214ENST00000476597 NRXN2Q9P2S2 1712 aa14.21□□□□□ -0.13
SEC13-214ENST00000476597 CNBD1Q8NA66 436 aa14.21□□□□□ -0.13
SEC13-214ENST00000476597 TSPYL4Q9UJ04 414 aa14.21□□□□□ -0.13
SEC13-214ENST00000476597 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
SEC13-214ENST00000476597 KIF3CO14782 793 aa14.2□□□□□ -0.14
SEC13-214ENST00000476597 LMOD3Q0VAK6 560 aa14.2□□□□□ -0.14
SEC13-214ENST00000476597 HLFQ16534 295 aa14.2□□□□□ -0.14
SEC13-214ENST00000476597 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
SEC13-214ENST00000476597 ZNF622Q969S3 477 aaKnown RBP eCLIP14.2□□□□□ -0.14
SEC13-214ENST00000476597 RUNDC1Q96C34 613 aa14.2□□□□□ -0.14
SEC13-214ENST00000476597 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
SEC13-214ENST00000476597 RRP7AQ9Y3A4 280 aaKnown RBP14.2□□□□□ -0.14
SEC13-214ENST00000476597 ERVV-1B6SEH8 477 aa14.19□□□□□ -0.14
SEC13-214ENST00000476597 ST5P78524 1137 aa14.19□□□□□ -0.14
SEC13-214ENST00000476597 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.141e-6■■■□□ 17.5
SEC13-214ENST00000476597 TPTE2Q6XPS3 522 aa14.19□□□□□ -0.14
SEC13-214ENST00000476597 NBPF5PQ86XG9 351 aaPredicted RBP14.19□□□□□ -0.14
SEC13-214ENST00000476597 RNF181Q9P0P0 153 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms