RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 USP16Q9Y5T5 823 aa16.95■□□□□ 0.3
PSMB4-204ENST00000476467 SSH1Q8WYL5 1049 aa16.95■□□□□ 0.3
PSMB4-204ENST00000476467 CCNL1Q9UK58 526 aaPredicted RBP16.95■□□□□ 0.3
PSMB4-204ENST00000476467 CACNA1FO60840 1977 aa16.95■□□□□ 0.3
PSMB4-204ENST00000476467 STARD3NLO95772 234 aa16.94■□□□□ 0.3
PSMB4-204ENST00000476467 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
PSMB4-204ENST00000476467 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
PSMB4-204ENST00000476467 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
PSMB4-204ENST00000476467 ERBB4Q15303 1308 aa16.94■□□□□ 0.3
PSMB4-204ENST00000476467 TAF1LQ8IZX4 1826 aa16.94■□□□□ 0.3
PSMB4-204ENST00000476467 ITPK1Q13572 414 aa16.93■□□□□ 0.3
PSMB4-204ENST00000476467 RREB1Q92766 1687 aa16.93■□□□□ 0.3
PSMB4-204ENST00000476467 CYP19A1P11511 503 aaPredicted RBP16.93■□□□□ 0.3
PSMB4-204ENST00000476467 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
PSMB4-204ENST00000476467 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
PSMB4-204ENST00000476467 BCL2L13Q9BXK5 485 aa16.93■□□□□ 0.3
PSMB4-204ENST00000476467 TCERG1O14776 1098 aaKnown RBP16.92■□□□□ 0.3
PSMB4-204ENST00000476467 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
PSMB4-204ENST00000476467 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
PSMB4-204ENST00000476467 DBF4Q9UBU7 674 aaPredicted RBP16.92■□□□□ 0.3
PSMB4-204ENST00000476467 BRPF1P55201 1214 aaPredicted RBP16.92■□□□□ 0.3
PSMB4-204ENST00000476467 CCDC125Q86Z20 511 aa16.92■□□□□ 0.3
PSMB4-204ENST00000476467 MRPL50Q8N5N7 158 aaKnown RBP16.92■□□□□ 0.3
PSMB4-204ENST00000476467 RBM19Q9Y4C8 960 aaKnown RBP16.92■□□□□ 0.3
PSMB4-204ENST00000476467 BCAR3O75815 825 aa16.91■□□□□ 0.3
PSMB4-204ENST00000476467 DDX21Q9NR30 783 aaKnown RBP eCLIP16.91■□□□□ 0.3
PSMB4-204ENST00000476467 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
PSMB4-204ENST00000476467 TXNRD1Q16881 649 aa16.9■□□□□ 0.3
PSMB4-204ENST00000476467 LINC00116Q8NCU8 138 aa16.9■□□□□ 0.3
PSMB4-204ENST00000476467 CNTNAP4Q9C0A0 1308 aa16.9■□□□□ 0.3
PSMB4-204ENST00000476467 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
PSMB4-204ENST00000476467 BAG6P46379 1132 aa16.9■□□□□ 0.3
PSMB4-204ENST00000476467 KCNQ4P56696 695 aa16.9■□□□□ 0.3
PSMB4-204ENST00000476467 C4BP0C0L5 1744 aa16.89■□□□□ 0.3
PSMB4-204ENST00000476467 A1BGP04217 495 aa16.89■□□□□ 0.29
PSMB4-204ENST00000476467 HMGB2P26583 209 aaKnown RBP16.89■□□□□ 0.29
PSMB4-204ENST00000476467 CRKLP46109 303 aaKnown RBP16.89■□□□□ 0.29
PSMB4-204ENST00000476467 PDIA6Q15084 440 aa16.89■□□□□ 0.29
PSMB4-204ENST00000476467 LRRC4BQ9NT99 713 aa16.89■□□□□ 0.29
PSMB4-204ENST00000476467 CCDC87Q9NVE4 849 aa16.89■□□□□ 0.29
PSMB4-204ENST00000476467 MYH14Q7Z406 1995 aaKnown RBP16.89■□□□□ 0.29
PSMB4-204ENST00000476467 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
PSMB4-204ENST00000476467 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
PSMB4-204ENST00000476467 NBPF26B4DH59 902 aa16.88■□□□□ 0.29
PSMB4-204ENST00000476467 ANXA1P04083 346 aa16.88■□□□□ 0.29
PSMB4-204ENST00000476467 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
PSMB4-204ENST00000476467 NBPF10Q6P3W6 841 aaKnown RBP16.88■□□□□ 0.29
PSMB4-204ENST00000476467 PROM2Q8N271 834 aa16.88■□□□□ 0.29
PSMB4-204ENST00000476467 NBPF15Q8N660 670 aa16.88■□□□□ 0.29
PSMB4-204ENST00000476467 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
PSMB4-204ENST00000476467 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
PSMB4-204ENST00000476467 CAMKK2Q96RR4 588 aa16.87■□□□□ 0.29
PSMB4-204ENST00000476467 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
PSMB4-204ENST00000476467 MYL6BP14649 208 aa16.87■□□□□ 0.29
PSMB4-204ENST00000476467 LRP10Q7Z4F1 713 aa16.87■□□□□ 0.29
PSMB4-204ENST00000476467 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
PSMB4-204ENST00000476467 RRP1P56182 461 aaKnown RBP16.86■□□□□ 0.29
PSMB4-204ENST00000476467 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
PSMB4-204ENST00000476467 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.86■□□□□ 0.29
PSMB4-204ENST00000476467 FLIIQ13045 1269 aa16.85■□□□□ 0.29
PSMB4-204ENST00000476467 G2E3Q7L622 706 aa16.85■□□□□ 0.29
PSMB4-204ENST00000476467 PTPRCP08575 1304 aa16.85■□□□□ 0.29
PSMB4-204ENST00000476467 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
PSMB4-204ENST00000476467 IL6STP40189 918 aaPredicted RBP16.85■□□□□ 0.29
PSMB4-204ENST00000476467 EZH2Q15910 746 aaKnown RBP16.85■□□□□ 0.29
PSMB4-204ENST00000476467 FRAT1Q92837 279 aaPredicted RBP16.85■□□□□ 0.29
PSMB4-204ENST00000476467 PHAXQ9H814 394 aaKnown RBP16.85■□□□□ 0.29
PSMB4-204ENST00000476467 NOB1Q9ULX3 412 aaKnown RBP16.85■□□□□ 0.29
PSMB4-204ENST00000476467 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
PSMB4-204ENST00000476467 ILDR2Q71H61 639 aa16.84■□□□□ 0.29
PSMB4-204ENST00000476467 UPF1Q92900 1129 aaKnown RBP eCLIP16.84■□□□□ 0.29
PSMB4-204ENST00000476467 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
PSMB4-204ENST00000476467 ZKSCAN2Q63HK3 967 aa16.84■□□□□ 0.29
PSMB4-204ENST00000476467 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
PSMB4-204ENST00000476467 ARHGAP45Q92619 1136 aa16.84■□□□□ 0.29
PSMB4-204ENST00000476467 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
PSMB4-204ENST00000476467 AK7Q96M32 723 aa16.83■□□□□ 0.28
PSMB4-204ENST00000476467 EIF5P55010 431 aaKnown RBP16.82■□□□□ 0.28
PSMB4-204ENST00000476467 FKBP5Q13451 457 aaPredicted RBP16.82■□□□□ 0.28
PSMB4-204ENST00000476467 UBR3Q6ZT12 1888 aa16.82■□□□□ 0.28
PSMB4-204ENST00000476467 GNPATO15228 680 aa16.82■□□□□ 0.28
PSMB4-204ENST00000476467 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
PSMB4-204ENST00000476467 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
PSMB4-204ENST00000476467 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
PSMB4-204ENST00000476467 API5Q9BZZ5 524 aaKnown RBP16.82■□□□□ 0.28
PSMB4-204ENST00000476467 ZNF330Q9Y3S2 320 aaPredicted RBP16.82■□□□□ 0.28
PSMB4-204ENST00000476467 COL15A1P39059 1388 aa16.81■□□□□ 0.28
PSMB4-204ENST00000476467 PLIN1O60240 522 aa16.81■□□□□ 0.28
PSMB4-204ENST00000476467 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
PSMB4-204ENST00000476467 TRIM27P14373 513 aa16.81■□□□□ 0.28
PSMB4-204ENST00000476467 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
PSMB4-204ENST00000476467 NPM2Q86SE8 214 aaKnown RBP16.81■□□□□ 0.28
PSMB4-204ENST00000476467 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
PSMB4-204ENST00000476467 RTCBQ9Y3I0 505 aaKnown RBP16.8■□□□□ 0.28
PSMB4-204ENST00000476467 ARFGEF2Q9Y6D5 1785 aa16.79■□□□□ 0.28
PSMB4-204ENST00000476467 MS4A1P11836 297 aa16.79■□□□□ 0.28
PSMB4-204ENST00000476467 TTLL7Q6ZT98 887 aa16.79■□□□□ 0.28
PSMB4-204ENST00000476467 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
PSMB4-204ENST00000476467 ADCY9O60503 1353 aa16.79■□□□□ 0.28
PSMB4-204ENST00000476467 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms