RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TMEM2Q9UHN6 1383 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 RABEP1Q15276 862 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 RPAP2Q8IXW5 612 aaPredicted RBP10.22□□□□□ -0.77
VAPB-205ENST00000476395 PLEKHG3A1L390 1219 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 F6X3S4 739 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 MTHFSDQ2M296 383 aaKnown RBP10.22□□□□□ -0.77
VAPB-205ENST00000476395 TSHZ3Q63HK5 1081 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 PALD1Q9ULE6 856 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 PTPRCP08575 1304 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 KDM3BQ7LBC6 1761 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 TCHHQ07283 1943 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 ARHGEF10O15013 1369 aa10.22□□□□□ -0.77
VAPB-205ENST00000476395 LMOD3Q0VAK6 560 aa10.21□□□□□ -0.77
VAPB-205ENST00000476395 CGNQ9P2M7 1197 aaKnown RBP10.21□□□□□ -0.77
VAPB-205ENST00000476395 GOLGA6L22H0YM25 854 aa10.21□□□□□ -0.77
VAPB-205ENST00000476395 U2AF2P26368 475 aaKnown RBP eCLIP10.21□□□□□ -0.773e-6■□□□□ 9.1
VAPB-205ENST00000476395 LTKP29376 864 aa10.21□□□□□ -0.78
VAPB-205ENST00000476395 TTC12Q9H892 705 aaPredicted RBP10.21□□□□□ -0.78
VAPB-205ENST00000476395 RGPD2P0DJD1 1756 aa10.21□□□□□ -0.78
VAPB-205ENST00000476395 DIP2AQ14689 1571 aa10.21□□□□□ -0.78
VAPB-205ENST00000476395 PTMAP06454 111 aaKnown RBP10.2□□□□□ -0.78
VAPB-205ENST00000476395 PNMA6EA0A0J9YXQ4 647 aa10.2□□□□□ -0.78
VAPB-205ENST00000476395 PDE1AP54750 535 aa10.2□□□□□ -0.78
VAPB-205ENST00000476395 UNC5CLQ8IV45 518 aa10.2□□□□□ -0.78
VAPB-205ENST00000476395 ZNF526Q8TF50 670 aaPredicted RBP10.2□□□□□ -0.78
VAPB-205ENST00000476395 MYRIPQ8NFW9 859 aa10.2□□□□□ -0.78
VAPB-205ENST00000476395 LTN1O94822 1766 aa10.19□□□□□ -0.78
VAPB-205ENST00000476395 SLC4A2P04920 1241 aa10.19□□□□□ -0.78
VAPB-205ENST00000476395 HS1BP3Q53T59 392 aa10.19□□□□□ -0.78
VAPB-205ENST00000476395 IGSF1Q8N6C5 1336 aa10.19□□□□□ -0.78
VAPB-205ENST00000476395 PATL2C9JE40 543 aaKnown RBP10.18□□□□□ -0.78
VAPB-205ENST00000476395 BCL2L12Q9HB09 334 aa10.18□□□□□ -0.78
VAPB-205ENST00000476395 APBB1O00213 710 aa10.18□□□□□ -0.78
VAPB-205ENST00000476395 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
VAPB-205ENST00000476395 MTERF4Q7Z6M4 381 aaKnown RBP10.18□□□□□ -0.78
VAPB-205ENST00000476395 TNRQ92752 1358 aa10.17□□□□□ -0.78
VAPB-205ENST00000476395 PLEKHG1Q9ULL1 1385 aa10.17□□□□□ -0.78
VAPB-205ENST00000476395 CUL4AQ13619 759 aa10.17□□□□□ -0.78
VAPB-205ENST00000476395 GDPD2Q9HCC8 539 aa10.17□□□□□ -0.78
VAPB-205ENST00000476395 KIAA2012Q0VF49 1180 aa10.17□□□□□ -0.78
VAPB-205ENST00000476395 EYA1Q99502 592 aa10.17□□□□□ -0.78
VAPB-205ENST00000476395 ARHGAP23Q9P227 1491 aa10.17□□□□□ -0.78
VAPB-205ENST00000476395 SLIT1O75093 1534 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 CLSTN1O94985 981 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 CCDC39Q9UFE4 941 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 EXOC6BQ9Y2D4 811 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 PXDNLA1KZ92 1463 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 PTMSP20962 102 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 SBNO1A3KN83 1393 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 LRSAM1Q6UWE0 723 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 TMX3Q96JJ7 454 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 ESYT1Q9BSJ8 1104 aa10.16□□□□□ -0.78
VAPB-205ENST00000476395 NUTM2FA1L443 756 aa10.15□□□□□ -0.78
VAPB-205ENST00000476395 BRD1O95696 1058 aa10.15□□□□□ -0.78
VAPB-205ENST00000476395 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.15□□□□□ -0.78
VAPB-205ENST00000476395 PSMD1Q99460 953 aa10.15□□□□□ -0.78
VAPB-205ENST00000476395 PLCD4Q9BRC7 762 aa10.15□□□□□ -0.78
VAPB-205ENST00000476395 LMO7Q8WWI1 1683 aa10.15□□□□□ -0.78
VAPB-205ENST00000476395 RPAP1Q9BWH6 1393 aaPredicted RBP10.15□□□□□ -0.78
VAPB-205ENST00000476395 ERC2O15083 957 aa10.15□□□□□ -0.78
VAPB-205ENST00000476395 TMED8Q6PL24 325 aaPredicted RBP10.15□□□□□ -0.78
VAPB-205ENST00000476395 STAP2Q9UGK3 403 aa10.15□□□□□ -0.78
VAPB-205ENST00000476395 USP25Q9UHP3 1055 aa10.15□□□□□ -0.78
VAPB-205ENST00000476395 SIPA1L3O60292 1781 aaPredicted RBP10.15□□□□□ -0.78
VAPB-205ENST00000476395 CHMLP26374 656 aa10.15□□□□□ -0.79
VAPB-205ENST00000476395 NAA30Q147X3 362 aaPredicted RBP10.15□□□□□ -0.79
VAPB-205ENST00000476395 DTNBO60941 627 aa10.14□□□□□ -0.79
VAPB-205ENST00000476395 NOLC1Q14978 699 aaKnown RBP eCLIP10.14□□□□□ -0.79
VAPB-205ENST00000476395 IL17REQ8NFR9 667 aa10.14□□□□□ -0.79
VAPB-205ENST00000476395 FLT4P35916 1363 aa10.14□□□□□ -0.79
VAPB-205ENST00000476395 NUCB2P80303 420 aa10.14□□□□□ -0.79
VAPB-205ENST00000476395 NOL8Q76FK4 1167 aaKnown RBP10.14□□□□□ -0.79
VAPB-205ENST00000476395 GTPBP4Q9BZE4 634 aaKnown RBP10.14□□□□□ -0.79
VAPB-205ENST00000476395 USP44Q9H0E7 712 aa10.14□□□□□ -0.79
VAPB-205ENST00000476395 KIF20AO95235 890 aa10.14□□□□□ -0.79
VAPB-205ENST00000476395 CWC22Q9HCG8 908 aaKnown RBP10.14□□□□□ -0.79
VAPB-205ENST00000476395 PHRF1Q9P1Y6 1649 aaKnown RBP10.14□□□□□ -0.79
VAPB-205ENST00000476395 NFAT5O94916 1531 aa10.14□□□□□ -0.79
VAPB-205ENST00000476395 FER1L4A9Z1Z3 1794 aa10.13□□□□□ -0.79
VAPB-205ENST00000476395 HDGFP51858 240 aaKnown RBP10.13□□□□□ -0.79
VAPB-205ENST00000476395 ATP8B2P98198 1209 aa10.13□□□□□ -0.79
VAPB-205ENST00000476395 PDCL2Q8N4E4 241 aa10.13□□□□□ -0.79
VAPB-205ENST00000476395 KIF3AQ9Y496 699 aa10.13□□□□□ -0.79
VAPB-205ENST00000476395 FLIIQ13045 1269 aa10.13□□□□□ -0.79
VAPB-205ENST00000476395 COL9A3Q14050 684 aaPredicted RBP10.13□□□□□ -0.79
VAPB-205ENST00000476395 ZNF771Q7L3S4 317 aaPredicted RBP10.13□□□□□ -0.79
VAPB-205ENST00000476395 PI4K2BQ8TCG2 481 aa10.13□□□□□ -0.79
VAPB-205ENST00000476395 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
VAPB-205ENST00000476395 LETM1O95202 739 aaPredicted RBP10.12□□□□□ -0.79
VAPB-205ENST00000476395 RIOK3O14730 519 aaKnown RBP10.12□□□□□ -0.79
VAPB-205ENST00000476395 CCT4P50991 539 aaKnown RBP10.12□□□□□ -0.79
VAPB-205ENST00000476395 CERS3Q8IU89 383 aa10.12□□□□□ -0.79
VAPB-205ENST00000476395 TSPYL4Q9UJ04 414 aa10.12□□□□□ -0.79
VAPB-205ENST00000476395 CEMIPQ8WUJ3 1361 aa10.12□□□□□ -0.79
VAPB-205ENST00000476395 MX1P20591 662 aa10.11□□□□□ -0.79
VAPB-205ENST00000476395 POLA2Q14181 598 aa10.11□□□□□ -0.79
VAPB-205ENST00000476395 MCM5P33992 734 aa10.11□□□□□ -0.79
VAPB-205ENST00000476395 SLC4A10Q6U841 1118 aa10.11□□□□□ -0.79
VAPB-205ENST00000476395 PPP4R3CPQ6ZMV5 832 aa10.11□□□□□ -0.79
VAPB-205ENST00000476395 TRERF1Q96PN7 1200 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms