RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 RASSF10A6NK89 507 aa14.15□□□□□ -0.14
CCHCR1-212ENST00000475684 ITGBL1O95965 494 aaPredicted RBP14.15□□□□□ -0.14
CCHCR1-212ENST00000475684 IFNL2Q8IZJ0 200 aa14.15□□□□□ -0.14
CCHCR1-212ENST00000475684 BEGAINQ9BUH8 593 aa14.15□□□□□ -0.14
CCHCR1-212ENST00000475684 CCDC88AQ3V6T2 1871 aa14.14□□□□□ -0.15
CCHCR1-212ENST00000475684 PHKG2P15735 406 aa14.14□□□□□ -0.15
CCHCR1-212ENST00000475684 COL5A3P25940 1745 aaPredicted RBP14.13□□□□□ -0.15
CCHCR1-212ENST00000475684 IQCA1LA6NCM1 817 aa14.13□□□□□ -0.15
CCHCR1-212ENST00000475684 C2CD5Q86YS7 1000 aa14.13□□□□□ -0.15
CCHCR1-212ENST00000475684 CLEC11AQ9Y240 323 aa14.13□□□□□ -0.15
CCHCR1-212ENST00000475684 ZNF831Q5JPB2 1677 aa14.13□□□□□ -0.15
CCHCR1-212ENST00000475684 H0YIN7 160 aa14.12□□□□□ -0.15
CCHCR1-212ENST00000475684 MCOLN1Q9GZU1 580 aa14.12□□□□□ -0.15
CCHCR1-212ENST00000475684 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCHCR1-212ENST00000475684 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
CCHCR1-212ENST00000475684 ABT1Q9ULW3 272 aaKnown RBP14.12□□□□□ -0.15
CCHCR1-212ENST00000475684 FLT4P35916 1363 aa14.11□□□□□ -0.15
CCHCR1-212ENST00000475684 ZPR1O75312 459 aa14.11□□□□□ -0.15
CCHCR1-212ENST00000475684 CRKLP46109 303 aaKnown RBP14.11□□□□□ -0.15
CCHCR1-212ENST00000475684 EAPPQ56P03 285 aaPredicted RBP14.11□□□□□ -0.15
CCHCR1-212ENST00000475684 GGNBP2Q9H3C7 697 aa14.11□□□□□ -0.15
CCHCR1-212ENST00000475684 TAF1DQ9H5J8 278 aaPredicted RBP14.11□□□□□ -0.15
CCHCR1-212ENST00000475684 C21orf2O43822 256 aa14.1□□□□□ -0.15
CCHCR1-212ENST00000475684 USPL1Q5W0Q7 1092 aa14.1□□□□□ -0.15
CCHCR1-212ENST00000475684 PUS7Q96PZ0 661 aaKnown RBP14.1□□□□□ -0.15
CCHCR1-212ENST00000475684 ERVV-2B6SEH9 535 aa14.09□□□□□ -0.15
CCHCR1-212ENST00000475684 FYB1O15117 783 aa14.09□□□□□ -0.15
CCHCR1-212ENST00000475684 PTCD1O75127 700 aaKnown RBP14.09□□□□□ -0.15
CCHCR1-212ENST00000475684 TSKSQ9UJT2 592 aa14.09□□□□□ -0.15
CCHCR1-212ENST00000475684 SERPINB2P05120 415 aa14.08□□□□□ -0.16
CCHCR1-212ENST00000475684 GRM1Q13255 1194 aa14.08□□□□□ -0.16
CCHCR1-212ENST00000475684 PAXIP1Q6ZW49 1069 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-212ENST00000475684 DLEC1Q9Y238 1755 aa14.08□□□□□ -0.16
CCHCR1-212ENST00000475684 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
CCHCR1-212ENST00000475684 NFIXQ14938 502 aa14.07□□□□□ -0.16
CCHCR1-212ENST00000475684 CNTROBQ8N137 903 aa14.07□□□□□ -0.16
CCHCR1-212ENST00000475684 ZNF622Q969S3 477 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCHCR1-212ENST00000475684 GPR101Q96P66 508 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-212ENST00000475684 MYH14Q7Z406 1995 aaKnown RBP14.07□□□□□ -0.16
CCHCR1-212ENST00000475684 TONSLQ96HA7 1378 aa14.07□□□□□ -0.16
CCHCR1-212ENST00000475684 ECE1P42892 770 aa14.06□□□□□ -0.16
CCHCR1-212ENST00000475684 DGKZQ13574 1117 aa14.06□□□□□ -0.16
CCHCR1-212ENST00000475684 MAP1SQ66K74 1059 aaPredicted RBP14.06□□□□□ -0.16
CCHCR1-212ENST00000475684 L3MBTL3Q96JM7 780 aaPredicted RBP14.06□□□□□ -0.16
CCHCR1-212ENST00000475684 CAPNS2Q96L46 248 aa14.06□□□□□ -0.16
CCHCR1-212ENST00000475684 TAOK3Q9H2K8 898 aa14.06□□□□□ -0.16
CCHCR1-212ENST00000475684 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
CCHCR1-212ENST00000475684 DICER1Q9UPY3 1922 aaKnown RBP14.05□□□□□ -0.16
CCHCR1-212ENST00000475684 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
CCHCR1-212ENST00000475684 CABP4P57796 275 aa14.05□□□□□ -0.16
CCHCR1-212ENST00000475684 PRPF38BQ5VTL8 546 aaKnown RBP14.05□□□□□ -0.16
CCHCR1-212ENST00000475684 INTS5Q6P9B9 1019 aaKnown RBP14.05□□□□□ -0.16
CCHCR1-212ENST00000475684 CARD11Q9BXL7 1154 aa14.05□□□□□ -0.16
CCHCR1-212ENST00000475684 LTBP3Q9NS15 1303 aa14.05□□□□□ -0.16
CCHCR1-212ENST00000475684 CYP4F22Q6NT55 531 aa14.04□□□□□ -0.16
CCHCR1-212ENST00000475684 EYA1Q99502 592 aa14.04□□□□□ -0.16
CCHCR1-212ENST00000475684 HACL1Q9UJ83 578 aa14.04□□□□□ -0.16
CCHCR1-212ENST00000475684 EMILIN1Q9Y6C2 1016 aa14.04□□□□□ -0.16
CCHCR1-212ENST00000475684 SCN4AP35499 1836 aa14.04□□□□□ -0.16
CCHCR1-212ENST00000475684 AFDNP55196 1824 aaKnown RBP14.04□□□□□ -0.16
CCHCR1-212ENST00000475684 HSP90AB1P08238 724 aaKnown RBP14.03□□□□□ -0.16
CCHCR1-212ENST00000475684 EPHX2P34913 555 aa14.03□□□□□ -0.16
CCHCR1-212ENST00000475684 PNMA8AQ86V59 439 aaPredicted RBP14.03□□□□□ -0.16
CCHCR1-212ENST00000475684 NRXN2Q9P2S2 1712 aa14.02□□□□□ -0.16
CCHCR1-212ENST00000475684 THSD7BQ9C0I4 1608 aa14.02□□□□□ -0.16
CCHCR1-212ENST00000475684 CARMIL3Q8ND23 1372 aa14.02□□□□□ -0.17
CCHCR1-212ENST00000475684 DDX21Q9NR30 783 aaKnown RBP eCLIP14.02□□□□□ -0.17
CCHCR1-212ENST00000475684 NARFQ9UHQ1 456 aa14.02□□□□□ -0.17
CCHCR1-212ENST00000475684 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
CCHCR1-212ENST00000475684 FER1L6Q2WGJ9 1857 aa14.01□□□□□ -0.17
CCHCR1-212ENST00000475684 ADAMTS7Q9UKP4 1686 aa14.01□□□□□ -0.17
CCHCR1-212ENST00000475684 AOC2O75106 756 aa14.01□□□□□ -0.17
CCHCR1-212ENST00000475684 PDE6BP35913 854 aa14.01□□□□□ -0.17
CCHCR1-212ENST00000475684 SOX10P56693 466 aa14.01□□□□□ -0.17
CCHCR1-212ENST00000475684 PDZRN3Q9UPQ7 1066 aa14.01□□□□□ -0.17
CCHCR1-212ENST00000475684 CA12O43570 354 aa14□□□□□ -0.17
CCHCR1-212ENST00000475684 MAP2K2P36507 400 aa14□□□□□ -0.17
CCHCR1-212ENST00000475684 ADAMTSL1Q8N6G6 1762 aa13.99□□□□□ -0.17
CCHCR1-212ENST00000475684 LTBP1Q14766 1721 aa13.99□□□□□ -0.17
CCHCR1-212ENST00000475684 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
CCHCR1-212ENST00000475684 ZBTB22O15209 634 aa13.99□□□□□ -0.17
CCHCR1-212ENST00000475684 BICDL1Q6ZP65 573 aa13.99□□□□□ -0.17
CCHCR1-212ENST00000475684 BRIP1Q9BX63 1249 aa13.99□□□□□ -0.17
CCHCR1-212ENST00000475684 BCL2L12Q9HB09 334 aa13.99□□□□□ -0.17
CCHCR1-212ENST00000475684 TJP1Q07157 1748 aa13.98□□□□□ -0.17
CCHCR1-212ENST00000475684 ZNF541Q9H0D2 1346 aa13.98□□□□□ -0.17
CCHCR1-212ENST00000475684 SOGA3Q5TF21 947 aa13.98□□□□□ -0.17
CCHCR1-212ENST00000475684 NFATC2IPQ8NCF5 419 aa13.98□□□□□ -0.17
CCHCR1-212ENST00000475684 SIN3AQ96ST3 1273 aa13.98□□□□□ -0.17
CCHCR1-212ENST00000475684 RNF123Q5XPI4 1314 aa13.97□□□□□ -0.17
CCHCR1-212ENST00000475684 WASHC2AQ641Q2 1341 aa13.97□□□□□ -0.17
CCHCR1-212ENST00000475684 ST20-MTHFSA0A0A6YYL1 179 aa13.97□□□□□ -0.17
CCHCR1-212ENST00000475684 MTHFSP49914 203 aa13.97□□□□□ -0.17
CCHCR1-212ENST00000475684 FMR1Q06787 632 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCHCR1-212ENST00000475684 NEUROD1Q13562 356 aa13.97□□□□□ -0.17
CCHCR1-212ENST00000475684 DNAJC10Q8IXB1 793 aa13.97□□□□□ -0.17
CCHCR1-212ENST00000475684 CCDC24Q8N4L8 307 aa13.97□□□□□ -0.17
CCHCR1-212ENST00000475684 CNKSR1Q969H4 720 aa13.97□□□□□ -0.17
CCHCR1-212ENST00000475684 PLEKHO1Q53GL0 409 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-212ENST00000475684 COL15A1P39059 1388 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms