RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 LARGE2Q8N3Y3 721 aa8.8□□□□□ -1
PDE6C-202ENST00000475427 MAFBQ9Y5Q3 323 aaPredicted RBP8.8□□□□□ -1
PDE6C-202ENST00000475427 PALM3A6NDB9 673 aaPredicted RBP8.79□□□□□ -1
PDE6C-202ENST00000475427 FOXK2Q01167 660 aa8.79□□□□□ -1
PDE6C-202ENST00000475427 MAP3K10Q02779 954 aa8.79□□□□□ -1
PDE6C-202ENST00000475427 ACDQ96AP0 544 aa8.79□□□□□ -1
PDE6C-202ENST00000475427 ZDHHC3Q9NYG2 299 aa8.79□□□□□ -1
PDE6C-202ENST00000475427 PARP3Q9Y6F1 533 aa8.79□□□□□ -1
PDE6C-202ENST00000475427 BNIP3LO60238 219 aa8.78□□□□□ -1
PDE6C-202ENST00000475427 TATP17735 454 aaPredicted RBP8.78□□□□□ -1
PDE6C-202ENST00000475427 ARSJQ5FYB0 599 aaPredicted RBP8.78□□□□□ -1
PDE6C-202ENST00000475427 FIGNL1Q6PIW4 674 aa8.78□□□□□ -1
PDE6C-202ENST00000475427 NLRP8Q86W28 1048 aa8.78□□□□□ -1
PDE6C-202ENST00000475427 SLC9A9Q8IVB4 645 aa8.78□□□□□ -1
PDE6C-202ENST00000475427 ZDHHC1Q8WTX9 485 aa8.78□□□□□ -1
PDE6C-202ENST00000475427 ABHD17AQ96GS6 310 aa8.78□□□□□ -1
PDE6C-202ENST00000475427 PPP1R12CQ9BZL4 782 aa8.78□□□□□ -1
PDE6C-202ENST00000475427 ZCCHC2Q9C0B9 1178 aaKnown RBP8.78□□□□□ -1
PDE6C-202ENST00000475427 NDFIP2Q9NV92 336 aa8.78□□□□□ -1
PDE6C-202ENST00000475427 ATXN7L1Q9ULK2 861 aaPredicted RBP8.78□□□□□ -1
PDE6C-202ENST00000475427 A0A1W2PNR3 127 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 BCRP11274 1271 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 NOS2P35228 1153 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 MAP2K3P46734 347 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 KCNMA1Q12791 1236 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 TEAD4Q15561 434 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 TBCELQ5QJ74 424 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 SIX5Q8N196 739 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 L3MBTL2Q969R5 705 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
PDE6C-202ENST00000475427 ZIC5Q96T25 663 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 ENAMQ9NRM1 1142 aa8.77□□□□□ -1.01
PDE6C-202ENST00000475427 M0R2N6 131 aa8.76□□□□□ -1.01
PDE6C-202ENST00000475427 DKK1O94907 266 aa8.76□□□□□ -1.01
PDE6C-202ENST00000475427 RASA1P20936 1047 aa8.76□□□□□ -1.01
PDE6C-202ENST00000475427 TXLNAP40222 546 aa8.76□□□□□ -1.01
PDE6C-202ENST00000475427 MARSP56192 900 aaKnown RBP8.76□□□□□ -1.01
PDE6C-202ENST00000475427 KLRG1Q96E93 195 aa8.76□□□□□ -1.01
PDE6C-202ENST00000475427 PCDHGC4Q9Y5F7 938 aa8.76□□□□□ -1.01
PDE6C-202ENST00000475427 SFI1A8K8P3 1242 aa8.75□□□□□ -1.01
PDE6C-202ENST00000475427 FGFR3P22607 806 aa8.75□□□□□ -1.01
PDE6C-202ENST00000475427 OXCT2Q9BYC2 517 aaPredicted RBP8.75□□□□□ -1.01
PDE6C-202ENST00000475427 ZNF777Q9ULD5 760 aaPredicted RBP8.75□□□□□ -1.01
PDE6C-202ENST00000475427 RBM19Q9Y4C8 960 aaKnown RBP8.75□□□□□ -1.01
PDE6C-202ENST00000475427 C2CD2LO14523 706 aa8.74□□□□□ -1.01
PDE6C-202ENST00000475427 ATXN7O15265 892 aaPredicted RBP8.74□□□□□ -1.01
PDE6C-202ENST00000475427 GSK3AP49840 483 aa8.74□□□□□ -1.01
PDE6C-202ENST00000475427 CTBSQ01459 385 aa8.74□□□□□ -1.01
PDE6C-202ENST00000475427 BICDL1Q6ZP65 573 aa8.74□□□□□ -1.01
PDE6C-202ENST00000475427 TSPAN10Q9H1Z9 355 aaPredicted RBP8.74□□□□□ -1.01
PDE6C-202ENST00000475427 ZNF232Q9UNY5 417 aa8.74□□□□□ -1.01
PDE6C-202ENST00000475427 SERTM1A2A2V5 107 aa8.73□□□□□ -1.01
PDE6C-202ENST00000475427 RNF225M0QZC1 329 aaPredicted RBP8.73□□□□□ -1.01
PDE6C-202ENST00000475427 BMP4P12644 408 aa8.73□□□□□ -1.01
PDE6C-202ENST00000475427 LMOD1P29536 600 aaPredicted RBP8.73□□□□□ -1.01
PDE6C-202ENST00000475427 KANK4Q5T7N3 995 aaPredicted RBP8.73□□□□□ -1.01
PDE6C-202ENST00000475427 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
PDE6C-202ENST00000475427 TSEN2Q8NCE0 465 aaKnown RBP8.73□□□□□ -1.01
PDE6C-202ENST00000475427 LRRC4BQ9NT99 713 aa8.73□□□□□ -1.01
PDE6C-202ENST00000475427 GJA3Q9Y6H8 435 aa8.73□□□□□ -1.01
PDE6C-202ENST00000475427 EML1O00423 815 aa8.72□□□□□ -1.01
PDE6C-202ENST00000475427 OIP5O43482 229 aa8.72□□□□□ -1.01
PDE6C-202ENST00000475427 PSMA6P60900 246 aaKnown RBP8.72□□□□□ -1.01
PDE6C-202ENST00000475427 TNP2Q05952 138 aa8.72□□□□□ -1.01
PDE6C-202ENST00000475427 SH3PXD2AQ5TCZ1 1133 aa8.72□□□□□ -1.01
PDE6C-202ENST00000475427 NEDD1Q8NHV4 660 aa8.72□□□□□ -1.01
PDE6C-202ENST00000475427 SCARF2Q96GP6 870 aaPredicted RBP8.72□□□□□ -1.01
PDE6C-202ENST00000475427 DCDC2BA2VCK2 349 aa8.71□□□□□ -1.02
PDE6C-202ENST00000475427 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.02
PDE6C-202ENST00000475427 SEC13P55735 322 aa8.71□□□□□ -1.02
PDE6C-202ENST00000475427 C7orf43Q8WVR3 580 aa8.71□□□□□ -1.02
PDE6C-202ENST00000475427 VRTNQ9H8Y1 702 aa8.71□□□□□ -1.02
PDE6C-202ENST00000475427 GDF2Q9UK05 429 aaPredicted RBP8.71□□□□□ -1.02
PDE6C-202ENST00000475427 KHNYNO15037 678 aaKnown RBP8.7□□□□□ -1.02
PDE6C-202ENST00000475427 RASSF7Q02833 373 aa8.7□□□□□ -1.02
PDE6C-202ENST00000475427 PTK7Q13308 1070 aa8.7□□□□□ -1.02
PDE6C-202ENST00000475427 CRTC2Q53ET0 693 aaPredicted RBP8.7□□□□□ -1.02
PDE6C-202ENST00000475427 HCN2Q9UL51 889 aa8.7□□□□□ -1.02
PDE6C-202ENST00000475427 CHMP3Q9Y3E7 222 aa8.7□□□□□ -1.02
PDE6C-202ENST00000475427 FAM157BP0CG42 384 aa8.69□□□□□ -1.02
PDE6C-202ENST00000475427 IRS1P35568 1242 aa8.69□□□□□ -1.02
PDE6C-202ENST00000475427 SAMD5Q5TGI4 173 aa8.69□□□□□ -1.02
PDE6C-202ENST00000475427 POTEAQ6S8J7 498 aa8.69□□□□□ -1.02
PDE6C-202ENST00000475427 C1orf229Q6ZS94 237 aaPredicted RBP8.69□□□□□ -1.02
PDE6C-202ENST00000475427 GOLGA6L1Q8N7Z2 621 aa8.69□□□□□ -1.02
PDE6C-202ENST00000475427 GALNT6Q8NCL4 622 aa8.69□□□□□ -1.02
PDE6C-202ENST00000475427 HCN4Q9Y3Q4 1203 aa8.69□□□□□ -1.02
PDE6C-202ENST00000475427 ATAD2Q6PL18 1390 aa8.69□□□□□ -1.02
PDE6C-202ENST00000475427 FAM196BA6NMK8 535 aa8.68□□□□□ -1.02
PDE6C-202ENST00000475427 C21orf2O43822 256 aa8.68□□□□□ -1.02
PDE6C-202ENST00000475427 PPP1R12BO60237 982 aaPredicted RBP8.68□□□□□ -1.02
PDE6C-202ENST00000475427 CD33P20138 364 aa8.68□□□□□ -1.02
PDE6C-202ENST00000475427 HIRAP54198 1017 aaPredicted RBP8.68□□□□□ -1.02
PDE6C-202ENST00000475427 DPYDQ12882 1025 aa8.68□□□□□ -1.02
PDE6C-202ENST00000475427 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
PDE6C-202ENST00000475427 FAM182BQ5T319 152 aa8.68□□□□□ -1.02
PDE6C-202ENST00000475427 LRRC69Q6ZNQ3 347 aa8.68□□□□□ -1.02
PDE6C-202ENST00000475427 TMEM151AQ8N4L1 468 aa8.68□□□□□ -1.02
PDE6C-202ENST00000475427 NEUROD4Q9HD90 331 aa8.68□□□□□ -1.02
PDE6C-202ENST00000475427 GPC6Q9Y625 555 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms