RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 GPR162Q16538 588 aa12.61□□□□□ -0.39
PDPN-204ENST00000475043 TRAPPC3LQ5T215 181 aa12.61□□□□□ -0.39
PDPN-204ENST00000475043 NLGN2Q8NFZ4 835 aa12.61□□□□□ -0.39
PDPN-204ENST00000475043 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
PDPN-204ENST00000475043 GNAT3A8MTJ3 354 aa12.6□□□□□ -0.39
PDPN-204ENST00000475043 RC3H1Q5TC82 1133 aaKnown RBP12.6□□□□□ -0.39
PDPN-204ENST00000475043 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
PDPN-204ENST00000475043 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
PDPN-204ENST00000475043 CICQ96RK0 1608 aaPredicted RBP12.59□□□□□ -0.39
PDPN-204ENST00000475043 RFC4P35249 363 aa12.59□□□□□ -0.39
PDPN-204ENST00000475043 CRKLP46109 303 aaKnown RBP12.59□□□□□ -0.39
PDPN-204ENST00000475043 TEFQ10587 303 aa12.59□□□□□ -0.39
PDPN-204ENST00000475043 MIER1Q8N108 512 aa12.59□□□□□ -0.39
PDPN-204ENST00000475043 PHACTR3Q96KR7 559 aa12.59□□□□□ -0.39
PDPN-204ENST00000475043 RSPH6AQ9H0K4 717 aa12.59□□□□□ -0.39
PDPN-204ENST00000475043 C4AP0C0L4 1744 aa12.59□□□□□ -0.39
PDPN-204ENST00000475043 RPS6KA4O75676 772 aa12.58□□□□□ -0.4
PDPN-204ENST00000475043 TTC5Q8N0Z6 440 aa12.58□□□□□ -0.4
PDPN-204ENST00000475043 ARHGEF1Q92888 912 aaKnown RBP12.58□□□□□ -0.4
PDPN-204ENST00000475043 PHF12Q96QT6 1004 aa12.58□□□□□ -0.4
PDPN-204ENST00000475043 CHD4Q14839 1912 aa12.57□□□□□ -0.4
PDPN-204ENST00000475043 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
PDPN-204ENST00000475043 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
PDPN-204ENST00000475043 DDX10Q13206 875 aaKnown RBP12.57□□□□□ -0.4
PDPN-204ENST00000475043 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
PDPN-204ENST00000475043 IL17REQ8NFR9 667 aa12.57□□□□□ -0.4
PDPN-204ENST00000475043 CD2APQ9Y5K6 639 aa12.57□□□□□ -0.4
PDPN-204ENST00000475043 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
PDPN-204ENST00000475043 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
PDPN-204ENST00000475043 FCHSD2O94868 740 aa12.56□□□□□ -0.4
PDPN-204ENST00000475043 MMP10P09238 476 aa12.56□□□□□ -0.4
PDPN-204ENST00000475043 NLGN1Q8N2Q7 840 aa12.56□□□□□ -0.4
PDPN-204ENST00000475043 NEFMP07197 916 aa12.55□□□□□ -0.4
PDPN-204ENST00000475043 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
PDPN-204ENST00000475043 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
PDPN-204ENST00000475043 CCDC87Q9NVE4 849 aa12.55□□□□□ -0.4
PDPN-204ENST00000475043 GYS1P13807 737 aa12.54□□□□□ -0.4
PDPN-204ENST00000475043 INTS5Q6P9B9 1019 aaKnown RBP12.54□□□□□ -0.4
PDPN-204ENST00000475043 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
PDPN-204ENST00000475043 CYP19A1P11511 503 aaPredicted RBP12.53□□□□□ -0.4
PDPN-204ENST00000475043 MCM10Q7L590 875 aa12.53□□□□□ -0.4
PDPN-204ENST00000475043 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
PDPN-204ENST00000475043 ZNF496Q96IT1 587 aaPredicted RBP12.53□□□□□ -0.4
PDPN-204ENST00000475043 SRP68Q9UHB9 627 aaKnown RBP12.53□□□□□ -0.4
PDPN-204ENST00000475043 WWC3Q9ULE0 1092 aa12.53□□□□□ -0.4
PDPN-204ENST00000475043 CEMIPQ8WUJ3 1361 aa12.53□□□□□ -0.4
PDPN-204ENST00000475043 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.4
PDPN-204ENST00000475043 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
PDPN-204ENST00000475043 ZPR1O75312 459 aa12.52□□□□□ -0.41
PDPN-204ENST00000475043 YBX3P16989 372 aaKnown RBP eCLIP12.52□□□□□ -0.41
PDPN-204ENST00000475043 RALBP1Q15311 655 aa12.52□□□□□ -0.41
PDPN-204ENST00000475043 ZBTB1Q9Y2K1 713 aa12.52□□□□□ -0.41
PDPN-204ENST00000475043 PARP3Q9Y6F1 533 aa12.52□□□□□ -0.41
PDPN-204ENST00000475043 USP42Q9H9J4 1324 aaKnown RBP12.52□□□□□ -0.41
PDPN-204ENST00000475043 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
PDPN-204ENST00000475043 UTRNP46939 3433 aa12.51□□□□□ -0.41
PDPN-204ENST00000475043 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
PDPN-204ENST00000475043 STARD3NLO95772 234 aa12.51□□□□□ -0.41
PDPN-204ENST00000475043 CANXP27824 592 aaKnown RBP12.51□□□□□ -0.41
PDPN-204ENST00000475043 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
PDPN-204ENST00000475043 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
PDPN-204ENST00000475043 SOS1Q07889 1333 aaPredicted RBP12.51□□□□□ -0.41
PDPN-204ENST00000475043 COL15A1P39059 1388 aa12.51□□□□□ -0.41
PDPN-204ENST00000475043 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
PDPN-204ENST00000475043 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
PDPN-204ENST00000475043 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
PDPN-204ENST00000475043 FMNL2Q96PY5 1086 aa12.5□□□□□ -0.41
PDPN-204ENST00000475043 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
PDPN-204ENST00000475043 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
PDPN-204ENST00000475043 ZNF330Q9Y3S2 320 aaPredicted RBP12.5□□□□□ -0.41
PDPN-204ENST00000475043 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
PDPN-204ENST00000475043 KCNQ3O43525 872 aa12.49□□□□□ -0.41
PDPN-204ENST00000475043 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
PDPN-204ENST00000475043 LHX8Q68G74 356 aa12.49□□□□□ -0.41
PDPN-204ENST00000475043 PNNQ9H307 717 aaKnown RBP12.49□□□□□ -0.41
PDPN-204ENST00000475043 GOLGB1Q14789 3259 aaKnown RBP12.49□□□□□ -0.41
PDPN-204ENST00000475043 NPM2Q86SE8 214 aaKnown RBP12.48□□□□□ -0.41
PDPN-204ENST00000475043 NARFQ9UHQ1 456 aa12.48□□□□□ -0.41
PDPN-204ENST00000475043 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
PDPN-204ENST00000475043 C10orf71Q711Q0 1435 aa12.47□□□□□ -0.41
PDPN-204ENST00000475043 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
PDPN-204ENST00000475043 A0A0G2JLW4 131 aa12.47□□□□□ -0.41
PDPN-204ENST00000475043 TGFB2P61812 414 aa12.47□□□□□ -0.41
PDPN-204ENST00000475043 ZNF784Q8NCA9 323 aaPredicted RBP12.47□□□□□ -0.41
PDPN-204ENST00000475043 PLEKHF1Q96S99 279 aa12.47□□□□□ -0.41
PDPN-204ENST00000475043 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
PDPN-204ENST00000475043 ZEB1P37275 1124 aaPredicted RBP12.46□□□□□ -0.41
PDPN-204ENST00000475043 DDR1Q08345 913 aa12.46□□□□□ -0.41
PDPN-204ENST00000475043 TAF7Q15545 349 aaPredicted RBP12.46□□□□□ -0.41
PDPN-204ENST00000475043 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
PDPN-204ENST00000475043 AFDNP55196 1824 aaKnown RBP12.46□□□□□ -0.42
PDPN-204ENST00000475043 A0A087WZG4 1122 aa12.45□□□□□ -0.42
PDPN-204ENST00000475043 POLRMTO00411 1230 aaKnown RBP12.45□□□□□ -0.42
PDPN-204ENST00000475043 A1BGP04217 495 aa12.45□□□□□ -0.42
PDPN-204ENST00000475043 TM4SF1P30408 202 aa12.45□□□□□ -0.42
PDPN-204ENST00000475043 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
PDPN-204ENST00000475043 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
PDPN-204ENST00000475043 BCS1LQ9Y276 419 aa12.45□□□□□ -0.42
PDPN-204ENST00000475043 KDM3BQ7LBC6 1761 aa12.44□□□□□ -0.42
PDPN-204ENST00000475043 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms