RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 SLFN5Q08AF3 891 aa12.41□□□□□ -0.42
DDX39B-217ENST00000474961 NKX1-1Q15270 411 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-217ENST00000474961 BRWD3Q6RI45 1802 aa12.41□□□□□ -0.42
DDX39B-217ENST00000474961 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
DDX39B-217ENST00000474961 ITGB4P16144 1822 aa12.4□□□□□ -0.42
DDX39B-217ENST00000474961 E9PSI1 815 aa12.4□□□□□ -0.42
DDX39B-217ENST00000474961 DCAF5Q96JK2 942 aa12.4□□□□□ -0.42
DDX39B-217ENST00000474961 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.43
DDX39B-217ENST00000474961 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
DDX39B-217ENST00000474961 SEPT12Q8IYM1 358 aa12.39□□□□□ -0.43
DDX39B-217ENST00000474961 TRMT2AQ8IZ69 625 aaKnown RBP12.39□□□□□ -0.43
DDX39B-217ENST00000474961 MARCH10Q8NA82 808 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-217ENST00000474961 LAS1LQ9Y4W2 734 aaKnown RBP12.39□□□□□ -0.43
DDX39B-217ENST00000474961 ZNF853P0CG23 659 aa12.38□□□□□ -0.43
DDX39B-217ENST00000474961 RXRBP28702 533 aa12.38□□□□□ -0.43
DDX39B-217ENST00000474961 GNAI1P63096 354 aa12.38□□□□□ -0.43
DDX39B-217ENST00000474961 TEFQ10587 303 aa12.38□□□□□ -0.43
DDX39B-217ENST00000474961 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-217ENST00000474961 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
DDX39B-217ENST00000474961 IFT57Q9NWB7 429 aa12.38□□□□□ -0.43
DDX39B-217ENST00000474961 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
DDX39B-217ENST00000474961 IRX5P78411 483 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-217ENST00000474961 DUSP27Q5VZP5 1158 aa12.37□□□□□ -0.43
DDX39B-217ENST00000474961 MYH16Q9H6N6 1097 aa12.37□□□□□ -0.43
DDX39B-217ENST00000474961 KDM3BQ7LBC6 1761 aa12.36□□□□□ -0.43
DDX39B-217ENST00000474961 MRC1P22897 1456 aa12.36□□□□□ -0.43
DDX39B-217ENST00000474961 ERVV-2B6SEH9 535 aa12.36□□□□□ -0.43
DDX39B-217ENST00000474961 CHL1O00533 1208 aa12.36□□□□□ -0.43
DDX39B-217ENST00000474961 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-217ENST00000474961 CABP4P57796 275 aa12.36□□□□□ -0.43
DDX39B-217ENST00000474961 TSR2Q969E8 191 aaKnown RBP12.36□□□□□ -0.43
DDX39B-217ENST00000474961 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
DDX39B-217ENST00000474961 MBIPQ9NS73 344 aa12.36□□□□□ -0.43
DDX39B-217ENST00000474961 MIS18AQ9NYP9 233 aa12.36□□□□□ -0.43
DDX39B-217ENST00000474961 FANCIQ9NVI1 1328 aa12.36□□□□□ -0.43
DDX39B-217ENST00000474961 SBF2Q86WG5 1849 aa12.35□□□□□ -0.43
DDX39B-217ENST00000474961 NFATC2IPQ8NCF5 419 aa12.35□□□□□ -0.43
DDX39B-217ENST00000474961 BABAM1Q9NWV8 329 aa12.35□□□□□ -0.43
DDX39B-217ENST00000474961 TSPYL4Q9UJ04 414 aa12.35□□□□□ -0.43
DDX39B-217ENST00000474961 BTBD11A6QL63 1104 aa12.33□□□□□ -0.44
DDX39B-217ENST00000474961 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
DDX39B-217ENST00000474961 RGS12O14924 1447 aa12.32□□□□□ -0.44
DDX39B-217ENST00000474961 G3V3G9 751 aa12.32□□□□□ -0.44
DDX39B-217ENST00000474961 KCNQ3O43525 872 aa12.32□□□□□ -0.44
DDX39B-217ENST00000474961 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
DDX39B-217ENST00000474961 EXOSC9Q06265 439 aaKnown RBP12.32□□□□□ -0.44
DDX39B-217ENST00000474961 FAM182BQ5T319 152 aa12.32□□□□□ -0.44
DDX39B-217ENST00000474961 KRT27Q7Z3Y8 459 aa12.32□□□□□ -0.44
DDX39B-217ENST00000474961 ACSBG1Q96GR2 724 aa12.32□□□□□ -0.44
DDX39B-217ENST00000474961 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
DDX39B-217ENST00000474961 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
DDX39B-217ENST00000474961 PAPPAQ13219 1627 aa12.32□□□□□ -0.44
DDX39B-217ENST00000474961 SLC39A6Q13433 755 aa12.31□□□□□ -0.44
DDX39B-217ENST00000474961 LHX8Q68G74 356 aa12.31□□□□□ -0.44
DDX39B-217ENST00000474961 PIGBQ92521 554 aa12.31□□□□□ -0.44
DDX39B-217ENST00000474961 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-217ENST00000474961 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-217ENST00000474961 BCL9O00512 1426 aa12.3□□□□□ -0.44
DDX39B-217ENST00000474961 NHSQ6T4R5 1651 aa12.3□□□□□ -0.44
DDX39B-217ENST00000474961 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
DDX39B-217ENST00000474961 C8orf58Q8NAV2 365 aa12.3□□□□□ -0.44
DDX39B-217ENST00000474961 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
DDX39B-217ENST00000474961 KCNQ2O43526 872 aa12.29□□□□□ -0.44
DDX39B-217ENST00000474961 EIF4A1P60842 406 aaKnown RBP12.29□□□□□ -0.44
DDX39B-217ENST00000474961 KRT24Q2M2I5 525 aa12.29□□□□□ -0.44
DDX39B-217ENST00000474961 TSPYL6Q8N831 410 aa12.29□□□□□ -0.44
DDX39B-217ENST00000474961 BTAF1O14981 1849 aa12.29□□□□□ -0.44
DDX39B-217ENST00000474961 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
DDX39B-217ENST00000474961 ELL2O00472 640 aaPredicted RBP12.28□□□□□ -0.44
DDX39B-217ENST00000474961 FAM196AQ6ZSG2 479 aa12.28□□□□□ -0.44
DDX39B-217ENST00000474961 TTC5Q8N0Z6 440 aa12.28□□□□□ -0.44
DDX39B-217ENST00000474961 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
DDX39B-217ENST00000474961 ATG3Q9NT62 314 aa12.28□□□□□ -0.44
DDX39B-217ENST00000474961 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
DDX39B-217ENST00000474961 VAMP4O75379 141 aa12.27□□□□□ -0.45
DDX39B-217ENST00000474961 TWISTNBQ3B726 338 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-217ENST00000474961 MAMSTRQ6ZN01 415 aa12.27□□□□□ -0.45
DDX39B-217ENST00000474961 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-217ENST00000474961 KCPQ6ZWJ8 1503 aa12.27□□□□□ -0.45
DDX39B-217ENST00000474961 C5P01031 1676 aa12.26□□□□□ -0.45
DDX39B-217ENST00000474961 CT47B1P0C2W7 299 aaPredicted RBP12.26□□□□□ -0.45
DDX39B-217ENST00000474961 PTF1AQ7RTS3 328 aa12.26□□□□□ -0.45
DDX39B-217ENST00000474961 PDCD7Q8N8D1 485 aaKnown RBP12.26□□□□□ -0.45
DDX39B-217ENST00000474961 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
DDX39B-217ENST00000474961 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
DDX39B-217ENST00000474961 RCAN3Q9UKA8 241 aa12.26□□□□□ -0.45
DDX39B-217ENST00000474961 CACNA1FO60840 1977 aa12.26□□□□□ -0.45
DDX39B-217ENST00000474961 HEG1Q9ULI3 1381 aa12.26□□□□□ -0.45
DDX39B-217ENST00000474961 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
DDX39B-217ENST00000474961 LAMB4A4D0S4 1761 aa12.24□□□□□ -0.45
DDX39B-217ENST00000474961 PTCD1O75127 700 aaKnown RBP12.24□□□□□ -0.45
DDX39B-217ENST00000474961 GIGYF1O75420 1035 aaPredicted RBP12.24□□□□□ -0.45
DDX39B-217ENST00000474961 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
DDX39B-217ENST00000474961 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
DDX39B-217ENST00000474961 PRAMEF22A3QJZ6 481 aa12.23□□□□□ -0.45
DDX39B-217ENST00000474961 TRIM37O94972 964 aa12.23□□□□□ -0.45
DDX39B-217ENST00000474961 HOXB7P09629 217 aa12.23□□□□□ -0.45
DDX39B-217ENST00000474961 SNRPA1P09661 255 aaKnown RBP12.23□□□□□ -0.45
DDX39B-217ENST00000474961 RARSP54136 660 aaKnown RBP12.23□□□□□ -0.45
DDX39B-217ENST00000474961 ZNF428Q96B54 188 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms