RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
RTN1-205ENST00000474911 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
RTN1-205ENST00000474911 SYT17Q9BSW7 474 aa17.47■□□□□ 0.39
RTN1-205ENST00000474911 MYH16Q9H6N6 1097 aa17.47■□□□□ 0.39
RTN1-205ENST00000474911 PHF14O94880 888 aa17.47■□□□□ 0.39
RTN1-205ENST00000474911 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
RTN1-205ENST00000474911 RTCBQ9Y3I0 505 aaKnown RBP17.47■□□□□ 0.39
RTN1-205ENST00000474911 TEFQ10587 303 aa17.46■□□□□ 0.39
RTN1-205ENST00000474911 RPS6KA4O75676 772 aa17.45■□□□□ 0.38
RTN1-205ENST00000474911 SLC39A6Q13433 755 aa17.45■□□□□ 0.38
RTN1-205ENST00000474911 VSIG10Q8N0Z9 540 aa17.45■□□□□ 0.38
RTN1-205ENST00000474911 C4AP0C0L4 1744 aa17.45■□□□□ 0.38
RTN1-205ENST00000474911 THUMPD2Q9BTF0 503 aaKnown RBP17.44■□□□□ 0.38
RTN1-205ENST00000474911 IFT57Q9NWB7 429 aa17.44■□□□□ 0.38
RTN1-205ENST00000474911 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
RTN1-205ENST00000474911 GNAI1P63096 354 aa17.43■□□□□ 0.38
RTN1-205ENST00000474911 DCTN1Q14203 1278 aa17.43■□□□□ 0.38
RTN1-205ENST00000474911 TRAPPC3LQ5T215 181 aa17.43■□□□□ 0.38
RTN1-205ENST00000474911 MSL1Q68DK7 614 aa17.43■□□□□ 0.38
RTN1-205ENST00000474911 SMIM5Q71RC9 77 aa17.43■□□□□ 0.38
RTN1-205ENST00000474911 MCM10Q7L590 875 aa17.43■□□□□ 0.38
RTN1-205ENST00000474911 TTC5Q8N0Z6 440 aa17.42■□□□□ 0.38
RTN1-205ENST00000474911 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
RTN1-205ENST00000474911 DCAF8L1A6NGE4 600 aa17.41■□□□□ 0.38
RTN1-205ENST00000474911 ZNF790Q6PG37 636 aa17.41■□□□□ 0.38
RTN1-205ENST00000474911 ZNF853P0CG23 659 aa17.4■□□□□ 0.38
RTN1-205ENST00000474911 INTS5Q6P9B9 1019 aaKnown RBP17.4■□□□□ 0.38
RTN1-205ENST00000474911 DNAJC10Q8IXB1 793 aa17.4■□□□□ 0.38
RTN1-205ENST00000474911 ARHGEF1Q92888 912 aaKnown RBP17.4■□□□□ 0.38
RTN1-205ENST00000474911 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
RTN1-205ENST00000474911 CYP19A1P11511 503 aaPredicted RBP17.39■□□□□ 0.38
RTN1-205ENST00000474911 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.38
RTN1-205ENST00000474911 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
RTN1-205ENST00000474911 RFC4P35249 363 aa17.38■□□□□ 0.37
RTN1-205ENST00000474911 TSR2Q969E8 191 aaKnown RBP17.38■□□□□ 0.37
RTN1-205ENST00000474911 CCDC87Q9NVE4 849 aa17.38■□□□□ 0.37
RTN1-205ENST00000474911 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
RTN1-205ENST00000474911 HEG1Q9ULI3 1381 aa17.38■□□□□ 0.37
RTN1-205ENST00000474911 NLGN1Q8N2Q7 840 aa17.38■□□□□ 0.37
RTN1-205ENST00000474911 ZNF496Q96IT1 587 aaPredicted RBP17.38■□□□□ 0.37
RTN1-205ENST00000474911 FMNL2Q96PY5 1086 aa17.37■□□□□ 0.37
RTN1-205ENST00000474911 TEX13AQ9BXU3 409 aaPredicted RBP17.37■□□□□ 0.37
RTN1-205ENST00000474911 CD2APQ9Y5K6 639 aa17.37■□□□□ 0.37
RTN1-205ENST00000474911 CHL1O00533 1208 aa17.36■□□□□ 0.37
RTN1-205ENST00000474911 CT47B1P0C2W7 299 aaPredicted RBP17.36■□□□□ 0.37
RTN1-205ENST00000474911 GYS1P13807 737 aa17.36■□□□□ 0.37
RTN1-205ENST00000474911 KLHL34Q8N239 644 aa17.36■□□□□ 0.37
RTN1-205ENST00000474911 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
RTN1-205ENST00000474911 BABAM1Q9NWV8 329 aa17.36■□□□□ 0.37
RTN1-205ENST00000474911 SUPT16HQ9Y5B9 1047 aaKnown RBP17.36■□□□□ 0.37
RTN1-205ENST00000474911 SOS1Q07889 1333 aaPredicted RBP17.36■□□□□ 0.37
RTN1-205ENST00000474911 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
RTN1-205ENST00000474911 STARD3NLO95772 234 aa17.35■□□□□ 0.37
RTN1-205ENST00000474911 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
RTN1-205ENST00000474911 USP42Q9H9J4 1324 aaKnown RBP17.35■□□□□ 0.37
RTN1-205ENST00000474911 EXOSC9Q06265 439 aaKnown RBP17.34■□□□□ 0.37
RTN1-205ENST00000474911 TAF7Q15545 349 aaPredicted RBP17.34■□□□□ 0.37
RTN1-205ENST00000474911 NLGN2Q8NFZ4 835 aa17.34■□□□□ 0.37
RTN1-205ENST00000474911 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
RTN1-205ENST00000474911 CHD4Q14839 1912 aa17.33■□□□□ 0.37
RTN1-205ENST00000474911 KDM3BQ7LBC6 1761 aa17.33■□□□□ 0.37
RTN1-205ENST00000474911 MMP10P09238 476 aa17.33■□□□□ 0.36
RTN1-205ENST00000474911 COL15A1P39059 1388 aa17.32■□□□□ 0.36
RTN1-205ENST00000474911 KCNQ3O43525 872 aa17.32■□□□□ 0.36
RTN1-205ENST00000474911 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
RTN1-205ENST00000474911 RNF123Q5XPI4 1314 aa17.31■□□□□ 0.36
RTN1-205ENST00000474911 NEFLP07196 543 aa17.3■□□□□ 0.36
RTN1-205ENST00000474911 SRP68Q9UHB9 627 aaKnown RBP17.3■□□□□ 0.36
RTN1-205ENST00000474911 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
RTN1-205ENST00000474911 ZPR1O75312 459 aa17.3■□□□□ 0.36
RTN1-205ENST00000474911 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
RTN1-205ENST00000474911 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
RTN1-205ENST00000474911 LAMB4A4D0S4 1761 aa17.3■□□□□ 0.36
RTN1-205ENST00000474911 UTRNP46939 3433 aa17.29■□□□□ 0.36
RTN1-205ENST00000474911 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
RTN1-205ENST00000474911 CANXP27824 592 aaKnown RBP17.29■□□□□ 0.36
RTN1-205ENST00000474911 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
RTN1-205ENST00000474911 FKBP8Q14318 412 aa17.29■□□□□ 0.36
RTN1-205ENST00000474911 PARP3Q9Y6F1 533 aa17.29■□□□□ 0.36
RTN1-205ENST00000474911 KIAA1551Q9HCM1 1747 aa17.28■□□□□ 0.36
RTN1-205ENST00000474911 A0A087WZG4 1122 aa17.28■□□□□ 0.36
RTN1-205ENST00000474911 RARSP54136 660 aaKnown RBP17.28■□□□□ 0.36
RTN1-205ENST00000474911 GPR162Q16538 588 aa17.28■□□□□ 0.36
RTN1-205ENST00000474911 USPL1Q5W0Q7 1092 aa17.28■□□□□ 0.36
RTN1-205ENST00000474911 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
RTN1-205ENST00000474911 USP16Q9Y5T5 823 aa17.28■□□□□ 0.36
RTN1-205ENST00000474911 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
RTN1-205ENST00000474911 SCN7AQ01118 1682 aa17.27■□□□□ 0.36
RTN1-205ENST00000474911 TM4SF1P30408 202 aa17.27■□□□□ 0.35
RTN1-205ENST00000474911 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.35
RTN1-205ENST00000474911 TWISTNBQ3B726 338 aaPredicted RBP17.27■□□□□ 0.35
RTN1-205ENST00000474911 C8orf58Q8NAV2 365 aa17.26■□□□□ 0.35
RTN1-205ENST00000474911 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
RTN1-205ENST00000474911 NRXN2Q9P2S2 1712 aa17.25■□□□□ 0.35
RTN1-205ENST00000474911 VAMP4O75379 141 aa17.25■□□□□ 0.35
RTN1-205ENST00000474911 A1BGP04217 495 aa17.25■□□□□ 0.35
RTN1-205ENST00000474911 TGFB2P61812 414 aa17.25■□□□□ 0.35
RTN1-205ENST00000474911 TSPYL6Q8N831 410 aa17.25■□□□□ 0.35
RTN1-205ENST00000474911 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
RTN1-205ENST00000474911 BCL2L12Q9HB09 334 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms