RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 SNRKQ9NRH2 765 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 DYRK3O43781 588 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 COBLO75128 1261 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 IL2RAP01589 272 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 PCBP4P57723 403 aaKnown RBP2.31□□□□□ -2.04
HDAC9-222ENST00000474742 NR1H3Q13133 447 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 RSPO4Q2I0M5 234 aaPredicted RBP2.31□□□□□ -2.04
HDAC9-222ENST00000474742 NBPF1Q3BBV0 1214 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 TMEM259Q4ZIN3 620 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 LCE3BQ5TA77 95 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 BICDL1Q6ZP65 573 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 NLRP8Q86W28 1048 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 MTMR14Q8NCE2 650 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 XAGE2Q96GT9 111 aa2.31□□□□□ -2.04
HDAC9-222ENST00000474742 PCMTD1Q96MG8 357 aaPredicted RBP2.31□□□□□ -2.04
HDAC9-222ENST00000474742 ELOA3CA0A087WX78 387 aaPredicted RBP2.3□□□□□ -2.04
HDAC9-222ENST00000474742 A0A1W2PNR3 127 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 ELOA3DA6NLF2 546 aaPredicted RBP2.3□□□□□ -2.04
HDAC9-222ENST00000474742 FAM229AH3BQW9 127 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 APBB1O00213 710 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 TRAK2O60296 914 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 THBS1P07996 1170 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 MAPTP10636 758 aaKnown RBP2.3□□□□□ -2.04
HDAC9-222ENST00000474742 USP4Q13107 963 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 NEUROD1Q13562 356 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 ELOA3BQ3SY89 546 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 PRSS36Q5K4E3 855 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 FCHSD1Q86WN1 690 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 ELOA3Q8NG57 546 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 C1orf216Q8TAB5 229 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 TRIM11Q96F44 468 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 NIFKQ9BYG3 293 aaKnown RBP2.3□□□□□ -2.04
HDAC9-222ENST00000474742 TPSG1Q9NRR2 321 aa2.3□□□□□ -2.04
HDAC9-222ENST00000474742 PAX4O43316 350 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 HOXB4P17483 251 aaPredicted RBP2.29□□□□□ -2.04
HDAC9-222ENST00000474742 ITGB7P26010 798 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 LRP8Q14114 963 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 SLFNL1Q499Z3 407 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 OXLD1Q5BKU9 147 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 NKAPLQ5M9Q1 402 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 TRAPPC3LQ5T215 181 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 PPARGC1BQ86YN6 1023 aaKnown RBP2.29□□□□□ -2.04
HDAC9-222ENST00000474742 SIRT1Q96EB6 747 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 CDCA7Q9BWT1 371 aaPredicted RBP2.29□□□□□ -2.04
HDAC9-222ENST00000474742 FHDC1Q9C0D6 1143 aaPredicted RBP2.29□□□□□ -2.04
HDAC9-222ENST00000474742 CRISPLD1Q9H336 500 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 AVENQ9NQS1 362 aaPredicted RBP2.29□□□□□ -2.04
HDAC9-222ENST00000474742 NDFIP2Q9NV92 336 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 MARK1Q9P0L2 795 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 USP21Q9UK80 565 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 DOLKQ9UPQ8 538 aa2.29□□□□□ -2.04
HDAC9-222ENST00000474742 M0R082 166 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 RAC1P63000 192 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 TNP2Q05952 138 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 TBC1D8BQ0IIM8 1120 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 IRF5Q13568 498 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 UBAP2LQ14157 1087 aaKnown RBP2.28□□□□□ -2.04
HDAC9-222ENST00000474742 GRIK4Q16099 956 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 FAM182BQ5T319 152 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 ZNF468Q5VIY5 522 aaPredicted RBP2.28□□□□□ -2.04
HDAC9-222ENST00000474742 SYT9Q86SS6 491 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 ZNF417Q8TAU3 575 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 TP53INP1Q96A56 240 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 ZNF587Q96SQ5 575 aaPredicted RBP2.28□□□□□ -2.04
HDAC9-222ENST00000474742 IGFLR1Q9H665 355 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 GOLGA2P5Q9HBQ8 144 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 ETNK1Q9HBU6 452 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 PRM3Q9NNZ6 103 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 CABP1Q9NZU7 370 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 SERTAD1Q9UHV2 236 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 NDUFB9Q9Y6M9 179 aa2.28□□□□□ -2.04
HDAC9-222ENST00000474742 C9orf172C9J069 976 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 HYAL3O43820 417 aaPredicted RBP2.27□□□□□ -2.05
HDAC9-222ENST00000474742 STAU1O95793 577 aaKnown RBP2.27□□□□□ -2.05
HDAC9-222ENST00000474742 FAM157BP0CG42 384 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 TXKP42681 527 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 GDF10P55107 478 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 EIF4G2P78344 907 aaKnown RBP eCLIP2.27□□□□□ -2.05
HDAC9-222ENST00000474742 MCM6Q14566 821 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 TMEM132AQ24JP5 1023 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 FOXD4L6Q3SYB3 417 aaPredicted RBP2.27□□□□□ -2.05
HDAC9-222ENST00000474742 FOXD4L3Q6VB84 417 aaPredicted RBP2.27□□□□□ -2.05
HDAC9-222ENST00000474742 BANK1Q8NDB2 785 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 POM121Q96HA1 1249 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 CCDC85AQ96PX6 553 aaPredicted RBP2.27□□□□□ -2.05
HDAC9-222ENST00000474742 CEP126Q9P2H0 1117 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 KLF15Q9UIH9 416 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 TBC1D2BQ9UPU7 963 aa2.27□□□□□ -2.05
HDAC9-222ENST00000474742 SOCS7O14512 581 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 LILRB5O75023 590 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 INHAP05111 366 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 H2AFB1P0C5Y9 115 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 H2AFB2P0C5Z0 115 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 ELNP15502 786 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 YBX3P16989 372 aaKnown RBP eCLIP2.26□□□□□ -2.05
HDAC9-222ENST00000474742 ATP4AP20648 1035 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 SMTNP53814 917 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 NRG1Q02297 640 aaPredicted RBP2.26□□□□□ -2.05
HDAC9-222ENST00000474742 PSME1Q06323 249 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 LAMC2Q13753 1193 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms