RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 DNAJC10Q8IXB1 793 aa12.92□□□□□ -0.34
COL8A1-206ENST00000474648 PROM2Q8N271 834 aa12.92□□□□□ -0.34
COL8A1-206ENST00000474648 KDM3BQ7LBC6 1761 aa12.92□□□□□ -0.34
COL8A1-206ENST00000474648 ITPK1Q13572 414 aa12.91□□□□□ -0.34
COL8A1-206ENST00000474648 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
COL8A1-206ENST00000474648 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
COL8A1-206ENST00000474648 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
COL8A1-206ENST00000474648 SBF2Q86WG5 1849 aa12.9□□□□□ -0.34
COL8A1-206ENST00000474648 CYP19A1P11511 503 aaPredicted RBP12.9□□□□□ -0.34
COL8A1-206ENST00000474648 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
COL8A1-206ENST00000474648 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
COL8A1-206ENST00000474648 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
COL8A1-206ENST00000474648 KCNQ4P56696 695 aa12.9□□□□□ -0.34
COL8A1-206ENST00000474648 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
COL8A1-206ENST00000474648 ZNF428Q96B54 188 aa12.9□□□□□ -0.34
COL8A1-206ENST00000474648 TEX13AQ9BXU3 409 aaPredicted RBP12.9□□□□□ -0.34
COL8A1-206ENST00000474648 LRRC4BQ9NT99 713 aa12.9□□□□□ -0.34
COL8A1-206ENST00000474648 KAT6BQ8WYB5 2073 aa12.89□□□□□ -0.35
COL8A1-206ENST00000474648 TCERG1O14776 1098 aaKnown RBP12.89□□□□□ -0.35
COL8A1-206ENST00000474648 PDIA6Q15084 440 aa12.89□□□□□ -0.35
COL8A1-206ENST00000474648 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-206ENST00000474648 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
COL8A1-206ENST00000474648 RCAN3Q9UKA8 241 aa12.89□□□□□ -0.35
COL8A1-206ENST00000474648 EP400Q96L91 3159 aa12.89□□□□□ -0.35
COL8A1-206ENST00000474648 BCAR3O75815 825 aa12.88□□□□□ -0.35
COL8A1-206ENST00000474648 A1BGP04217 495 aa12.88□□□□□ -0.35
COL8A1-206ENST00000474648 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
COL8A1-206ENST00000474648 ALDH1L2Q3SY69 923 aa12.88□□□□□ -0.35
COL8A1-206ENST00000474648 HDGFL1Q5TGJ6 251 aa12.88□□□□□ -0.35
COL8A1-206ENST00000474648 CCDC30Q5VVM6 783 aa12.88□□□□□ -0.35
COL8A1-206ENST00000474648 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
COL8A1-206ENST00000474648 CAMKK2Q96RR4 588 aa12.88□□□□□ -0.35
COL8A1-206ENST00000474648 CCNL1Q9UK58 526 aaPredicted RBP12.88□□□□□ -0.35
COL8A1-206ENST00000474648 NBPF26B4DH59 902 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 STARD3NLO95772 234 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 FKBP8Q14318 412 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 PROSER3Q2NL68 480 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 NBPF10Q6P3W6 841 aaKnown RBP12.87□□□□□ -0.35
COL8A1-206ENST00000474648 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
COL8A1-206ENST00000474648 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 NBPF15Q8N660 670 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 LINC00116Q8NCU8 138 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 BTAF1O14981 1849 aa12.87□□□□□ -0.35
COL8A1-206ENST00000474648 UBR2Q8IWV8 1755 aa12.86□□□□□ -0.35
COL8A1-206ENST00000474648 CENPBP07199 599 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-206ENST00000474648 BRPF1P55201 1214 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-206ENST00000474648 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-206ENST00000474648 DEFB132Q7Z7B7 95 aa12.86□□□□□ -0.35
COL8A1-206ENST00000474648 UPF1Q92900 1129 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL8A1-206ENST00000474648 CHMP4AQ9BY43 222 aa12.86□□□□□ -0.35
COL8A1-206ENST00000474648 CHPF2Q9P2E5 772 aa12.86□□□□□ -0.35
COL8A1-206ENST00000474648 ANXA1P04083 346 aa12.85□□□□□ -0.35
COL8A1-206ENST00000474648 CRKLP46109 303 aaKnown RBP12.85□□□□□ -0.35
COL8A1-206ENST00000474648 PIP4K2AP48426 406 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-206ENST00000474648 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
COL8A1-206ENST00000474648 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
COL8A1-206ENST00000474648 G2E3Q7L622 706 aa12.85□□□□□ -0.35
COL8A1-206ENST00000474648 BCL2L13Q9BXK5 485 aa12.85□□□□□ -0.35
COL8A1-206ENST00000474648 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL8A1-206ENST00000474648 ERBB4Q15303 1308 aa12.85□□□□□ -0.35
COL8A1-206ENST00000474648 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
COL8A1-206ENST00000474648 SMC4Q9NTJ3 1288 aa12.84□□□□□ -0.35
COL8A1-206ENST00000474648 DBF4Q9UBU7 674 aaPredicted RBP12.84□□□□□ -0.35
COL8A1-206ENST00000474648 BAG6P46379 1132 aa12.83□□□□□ -0.36
COL8A1-206ENST00000474648 STK31Q9BXU1 1019 aa12.83□□□□□ -0.36
COL8A1-206ENST00000474648 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
COL8A1-206ENST00000474648 CCDC87Q9NVE4 849 aa12.83□□□□□ -0.36
COL8A1-206ENST00000474648 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
COL8A1-206ENST00000474648 CNTNAP4Q9C0A0 1308 aa12.83□□□□□ -0.36
COL8A1-206ENST00000474648 MYL6BP14649 208 aa12.82□□□□□ -0.36
COL8A1-206ENST00000474648 CANXP27824 592 aaKnown RBP12.82□□□□□ -0.36
COL8A1-206ENST00000474648 EIF5P55010 431 aaKnown RBP12.82□□□□□ -0.36
COL8A1-206ENST00000474648 HYPKQ9NX55 129 aa12.82□□□□□ -0.36
COL8A1-206ENST00000474648 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
COL8A1-206ENST00000474648 RNF123Q5XPI4 1314 aa12.82□□□□□ -0.36
COL8A1-206ENST00000474648 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
COL8A1-206ENST00000474648 C5P01031 1676 aa12.81□□□□□ -0.36
COL8A1-206ENST00000474648 ZNF831Q5JPB2 1677 aa12.81□□□□□ -0.36
COL8A1-206ENST00000474648 RPS6KA4O75676 772 aa12.81□□□□□ -0.36
COL8A1-206ENST00000474648 IL6STP40189 918 aaPredicted RBP12.81□□□□□ -0.36
COL8A1-206ENST00000474648 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
COL8A1-206ENST00000474648 AMIGO3Q86WK7 504 aa12.81□□□□□ -0.36
COL8A1-206ENST00000474648 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
COL8A1-206ENST00000474648 LY75O60449 1722 aa12.81□□□□□ -0.36
COL8A1-206ENST00000474648 TJP1Q07157 1748 aa12.81□□□□□ -0.36
COL8A1-206ENST00000474648 PLIN1O60240 522 aa12.8□□□□□ -0.36
COL8A1-206ENST00000474648 FLIIQ13045 1269 aa12.8□□□□□ -0.36
COL8A1-206ENST00000474648 POTEHQ6S545 545 aa12.8□□□□□ -0.36
COL8A1-206ENST00000474648 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
COL8A1-206ENST00000474648 XAGE3Q8WTP9 111 aa12.8□□□□□ -0.36
COL8A1-206ENST00000474648 ARHGAP45Q92619 1136 aa12.8□□□□□ -0.36
COL8A1-206ENST00000474648 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-206ENST00000474648 HMGB2P26583 209 aaKnown RBP12.79□□□□□ -0.36
COL8A1-206ENST00000474648 ZNF827Q17R98 1081 aa12.79□□□□□ -0.36
COL8A1-206ENST00000474648 TTLL7Q6ZT98 887 aa12.79□□□□□ -0.36
COL8A1-206ENST00000474648 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms