RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
CCDC93-208ENST00000474546 YBX3P16989 372 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC93-208ENST00000474546 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC93-208ENST00000474546 KIF2CQ99661 725 aa9.76□□□□□ -0.85
CCDC93-208ENST00000474546 LNPKQ9C0E8 428 aa9.76□□□□□ -0.85
CCDC93-208ENST00000474546 BCL11BQ9C0K0 894 aaPredicted RBP9.76□□□□□ -0.85
CCDC93-208ENST00000474546 SLC12A5Q9H2X9 1139 aa9.76□□□□□ -0.85
CCDC93-208ENST00000474546 SLC52A1Q9NWF4 448 aa9.76□□□□□ -0.85
CCDC93-208ENST00000474546 PTPRCP08575 1304 aa9.76□□□□□ -0.85
CCDC93-208ENST00000474546 XRN1Q8IZH2 1706 aaKnown RBP9.76□□□□□ -0.85
CCDC93-208ENST00000474546 GOLGA6L6A8MZA4 724 aa9.75□□□□□ -0.85
CCDC93-208ENST00000474546 U2SURPO15042 1029 aaKnown RBP9.75□□□□□ -0.85
CCDC93-208ENST00000474546 NFE2L2Q16236 605 aa9.75□□□□□ -0.85
CCDC93-208ENST00000474546 TTC22Q5TAA0 569 aa9.75□□□□□ -0.85
CCDC93-208ENST00000474546 CHMP4AQ9BY43 222 aa9.75□□□□□ -0.85
CCDC93-208ENST00000474546 DCTPP1Q9H773 170 aa9.75□□□□□ -0.85
CCDC93-208ENST00000474546 NRAPQ86VF7 1730 aa9.75□□□□□ -0.85
CCDC93-208ENST00000474546 SOS1Q07889 1333 aaPredicted RBP9.75□□□□□ -0.85
CCDC93-208ENST00000474546 ERBB4Q15303 1308 aa9.75□□□□□ -0.85
CCDC93-208ENST00000474546 PTPRUQ92729 1446 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 RIMS2Q9UQ26 1411 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 DLL1O00548 723 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 GAS2L3Q86XJ1 694 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 IL17RAQ96F46 866 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 SRCIN1Q9C0H9 1055 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 DIAPH3Q9NSV4 1193 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 LMBRD1Q9NUN5 540 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 STK32BQ9NY57 414 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 TRAK1Q9UPV9 953 aa9.74□□□□□ -0.85
CCDC93-208ENST00000474546 ERC2O15083 957 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 PTMAP06454 111 aaKnown RBP9.73□□□□□ -0.85
CCDC93-208ENST00000474546 SSFA2P28290 1259 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 GTF2F1P35269 517 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC93-208ENST00000474546 FAM193AP78312 1265 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 MCTP1Q6DN14 999 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 CAVIN1Q6NZI2 390 aaKnown RBP9.73□□□□□ -0.85
CCDC93-208ENST00000474546 PDCL2Q8N4E4 241 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 MRPL50Q8N5N7 158 aaKnown RBP9.73□□□□□ -0.85
CCDC93-208ENST00000474546 USP26Q9BXU7 913 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 GTPBP4Q9BZE4 634 aaKnown RBP9.73□□□□□ -0.85
CCDC93-208ENST00000474546 TSPY26PQ9H489 355 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 OSBPL3Q9H4L5 887 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 AOX1Q06278 1338 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 SPATA31A5Q5VU36 1347 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 SPATA31A7Q8IWB4 1347 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 PITPNM2Q9BZ72 1349 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 A0A1W2PP64 1363 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 KIAA0232Q92628 1395 aa9.73□□□□□ -0.85
CCDC93-208ENST00000474546 UQCRHLA0A096LP55 91 aa9.72□□□□□ -0.85
CCDC93-208ENST00000474546 CCDC85CA6NKD9 419 aa9.72□□□□□ -0.85
CCDC93-208ENST00000474546 KIF20AO95235 890 aa9.72□□□□□ -0.85
CCDC93-208ENST00000474546 UQCRHP07919 91 aa9.72□□□□□ -0.85
CCDC93-208ENST00000474546 SLC15A2Q16348 729 aa9.72□□□□□ -0.85
CCDC93-208ENST00000474546 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
CCDC93-208ENST00000474546 CCDC94Q9BW85 323 aaPredicted RBP9.72□□□□□ -0.85
CCDC93-208ENST00000474546 WDR33Q9C0J8 1336 aaKnown RBP9.72□□□□□ -0.85
CCDC93-208ENST00000474546 ARHGEF10O15013 1369 aa9.72□□□□□ -0.85
CCDC93-208ENST00000474546 MYO5BQ9ULV0 1848 aa9.71□□□□□ -0.85
CCDC93-208ENST00000474546 PRPF38BQ5VTL8 546 aaKnown RBP9.71□□□□□ -0.86
CCDC93-208ENST00000474546 ANKRD44Q8N8A2 993 aa9.71□□□□□ -0.86
CCDC93-208ENST00000474546 MYRIPQ8NFW9 859 aa9.71□□□□□ -0.86
CCDC93-208ENST00000474546 GAS2L2Q8NHY3 880 aa9.71□□□□□ -0.86
CCDC93-208ENST00000474546 USP25Q9UHP3 1055 aa9.71□□□□□ -0.86
CCDC93-208ENST00000474546 R3HCC1Q9Y3T6 440 aaKnown RBP9.71□□□□□ -0.86
CCDC93-208ENST00000474546 VAMP4O75379 141 aa9.7□□□□□ -0.86
CCDC93-208ENST00000474546 ZNF853P0CG23 659 aa9.7□□□□□ -0.86
CCDC93-208ENST00000474546 SRPK2P78362 688 aaKnown RBP9.7□□□□□ -0.86
CCDC93-208ENST00000474546 SYCP1Q15431 976 aa9.7□□□□□ -0.86
CCDC93-208ENST00000474546 CREBRFQ8IUR6 639 aa9.7□□□□□ -0.86
CCDC93-208ENST00000474546 PLEKHM2Q8IWE5 1019 aa9.7□□□□□ -0.86
CCDC93-208ENST00000474546 C16orf71Q8IYS4 520 aaPredicted RBP9.7□□□□□ -0.86
CCDC93-208ENST00000474546 TMEM87AQ8NBN3 555 aa9.7□□□□□ -0.86
CCDC93-208ENST00000474546 CAVIN2O95810 425 aa9.69□□□□□ -0.86
CCDC93-208ENST00000474546 POLD1P28340 1107 aa9.69□□□□□ -0.86
CCDC93-208ENST00000474546 CUL4AQ13619 759 aa9.69□□□□□ -0.86
CCDC93-208ENST00000474546 DHX8Q14562 1220 aaKnown RBP9.69□□□□□ -0.86
CCDC93-208ENST00000474546 TWISTNBQ3B726 338 aaPredicted RBP9.69□□□□□ -0.86
CCDC93-208ENST00000474546 SPATA31A3Q5VYP0 1347 aa9.69□□□□□ -0.86
CCDC93-208ENST00000474546 EDC4Q6P2E9 1401 aaKnown RBP9.69□□□□□ -0.86
CCDC93-208ENST00000474546 PIBF1Q8WXW3 757 aa9.69□□□□□ -0.86
CCDC93-208ENST00000474546 FYB1O15117 783 aa9.68□□□□□ -0.86
CCDC93-208ENST00000474546 CTCFP49711 727 aaPredicted RBP9.68□□□□□ -0.86
CCDC93-208ENST00000474546 CCT4P50991 539 aaKnown RBP9.68□□□□□ -0.86
CCDC93-208ENST00000474546 CCDC183Q5T5S1 534 aa9.68□□□□□ -0.86
CCDC93-208ENST00000474546 NLGN2Q8NFZ4 835 aa9.68□□□□□ -0.86
CCDC93-208ENST00000474546 FEZ1Q99689 392 aa9.68□□□□□ -0.86
CCDC93-208ENST00000474546 BTG4Q9NY30 223 aa9.68□□□□□ -0.86
CCDC93-208ENST00000474546 FAM13BQ9NYF5 915 aa9.68□□□□□ -0.86
CCDC93-208ENST00000474546 TNNQ9UQP3 1299 aa9.68□□□□□ -0.86
CCDC93-208ENST00000474546 FOXN1O15353 648 aa9.67□□□□□ -0.86
CCDC93-208ENST00000474546 FOXO3O43524 673 aa9.67□□□□□ -0.86
CCDC93-208ENST00000474546 PRPF40AO75400 957 aaKnown RBP9.67□□□□□ -0.86
CCDC93-208ENST00000474546 BRD1O95696 1058 aa9.67□□□□□ -0.86
CCDC93-208ENST00000474546 PRIM1P49642 420 aaKnown RBP9.67□□□□□ -0.86
CCDC93-208ENST00000474546 DNTTIP2Q5QJE6 756 aaKnown RBP9.67□□□□□ -0.86
CCDC93-208ENST00000474546 RBSNQ9H1K0 784 aa9.67□□□□□ -0.86
CCDC93-208ENST00000474546 KIF3AQ9Y496 699 aa9.67□□□□□ -0.86
CCDC93-208ENST00000474546 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.67□□□□□ -0.86
CCDC93-208ENST00000474546 YTHDC2Q9H6S0 1430 aaKnown RBP9.66□□□□□ -0.86
CCDC93-208ENST00000474546 RTL1A6NKG5 1358 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms