RNA–Protein interactions for RNA: ENST00000474496.5

TRAF3IP3-210, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 4

Gene TRAF3IP3, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-210ENST00000474496 RREB1Q92766 1687 aa13.72□□□□□ -0.21
TRAF3IP3-210ENST00000474496 PHF14O94880 888 aa13.72□□□□□ -0.21
TRAF3IP3-210ENST00000474496 TWISTNBQ3B726 338 aaPredicted RBP13.72□□□□□ -0.21
TRAF3IP3-210ENST00000474496 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
TRAF3IP3-210ENST00000474496 C8orf58Q8NAV2 365 aa13.72□□□□□ -0.21
TRAF3IP3-210ENST00000474496 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
TRAF3IP3-210ENST00000474496 CCDC87Q9NVE4 849 aa13.72□□□□□ -0.21
TRAF3IP3-210ENST00000474496 NUP188Q5SRE5 1749 aa13.72□□□□□ -0.21
TRAF3IP3-210ENST00000474496 TJP1Q07157 1748 aa13.71□□□□□ -0.21
TRAF3IP3-210ENST00000474496 CYP19A1P11511 503 aaPredicted RBP13.71□□□□□ -0.21
TRAF3IP3-210ENST00000474496 CRKLP46109 303 aaKnown RBP13.71□□□□□ -0.21
TRAF3IP3-210ENST00000474496 RTCBQ9Y3I0 505 aaKnown RBP13.71□□□□□ -0.21
TRAF3IP3-210ENST00000474496 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
TRAF3IP3-210ENST00000474496 C4BP0C0L5 1744 aa13.7□□□□□ -0.22
TRAF3IP3-210ENST00000474496 HOXB7P09629 217 aa13.7□□□□□ -0.22
TRAF3IP3-210ENST00000474496 SLC15A2Q16348 729 aa13.7□□□□□ -0.22
TRAF3IP3-210ENST00000474496 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 CNTNAP4Q9C0A0 1308 aa13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 A1BGP04217 495 aa13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 MYL6BP14649 208 aa13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 PIP4K2AP48426 406 aaPredicted RBP13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 ZNF827Q17R98 1081 aa13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 TSPYL6Q8N831 410 aa13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 STK31Q9BXU1 1019 aa13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 ZBTB1Q9Y2K1 713 aa13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
TRAF3IP3-210ENST00000474496 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
TRAF3IP3-210ENST00000474496 COL5A3P25940 1745 aaPredicted RBP13.68□□□□□ -0.22
TRAF3IP3-210ENST00000474496 PSDA5PKW4 1024 aaPredicted RBP13.68□□□□□ -0.22
TRAF3IP3-210ENST00000474496 R3HDM1Q15032 1099 aaKnown RBP13.68□□□□□ -0.22
TRAF3IP3-210ENST00000474496 TRAPPC3LQ5T215 181 aa13.68□□□□□ -0.22
TRAF3IP3-210ENST00000474496 RC3H1Q5TC82 1133 aaKnown RBP13.68□□□□□ -0.22
TRAF3IP3-210ENST00000474496 CCDC30Q5VVM6 783 aa13.68□□□□□ -0.22
TRAF3IP3-210ENST00000474496 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
TRAF3IP3-210ENST00000474496 SOS1Q07889 1333 aaPredicted RBP13.67□□□□□ -0.22
TRAF3IP3-210ENST00000474496 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-210ENST00000474496 RFC4P35249 363 aa13.67□□□□□ -0.22
TRAF3IP3-210ENST00000474496 INTS5Q6P9B9 1019 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-210ENST00000474496 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
TRAF3IP3-210ENST00000474496 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
TRAF3IP3-210ENST00000474496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.66□□□□□ -0.22
TRAF3IP3-210ENST00000474496 RPS6KA4O75676 772 aa13.66□□□□□ -0.22
TRAF3IP3-210ENST00000474496 SSFA2P28290 1259 aa13.66□□□□□ -0.22
TRAF3IP3-210ENST00000474496 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
TRAF3IP3-210ENST00000474496 CHPF2Q9P2E5 772 aa13.66□□□□□ -0.22
TRAF3IP3-210ENST00000474496 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
TRAF3IP3-210ENST00000474496 ERBB4Q15303 1308 aa13.65□□□□□ -0.22
TRAF3IP3-210ENST00000474496 CICQ96RK0 1608 aaPredicted RBP13.65□□□□□ -0.22
TRAF3IP3-210ENST00000474496 A0A087WZG4 1122 aa13.65□□□□□ -0.22
TRAF3IP3-210ENST00000474496 ZPR1O75312 459 aa13.65□□□□□ -0.22
TRAF3IP3-210ENST00000474496 ANXA1P04083 346 aa13.65□□□□□ -0.22
TRAF3IP3-210ENST00000474496 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
TRAF3IP3-210ENST00000474496 AIMP1Q12904 312 aaKnown RBP13.65□□□□□ -0.22
TRAF3IP3-210ENST00000474496 KIF6Q6ZMV9 814 aa13.65□□□□□ -0.22
TRAF3IP3-210ENST00000474496 COL15A1P39059 1388 aa13.64□□□□□ -0.23
TRAF3IP3-210ENST00000474496 VAMP4O75379 141 aa13.64□□□□□ -0.23
TRAF3IP3-210ENST00000474496 ADRA2BP18089 450 aa13.64□□□□□ -0.23
TRAF3IP3-210ENST00000474496 TRMT2AQ8IZ69 625 aaKnown RBP13.64□□□□□ -0.23
TRAF3IP3-210ENST00000474496 DDX21Q9NR30 783 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAF3IP3-210ENST00000474496 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
TRAF3IP3-210ENST00000474496 ARHGEF1Q92888 912 aaKnown RBP13.63□□□□□ -0.23
TRAF3IP3-210ENST00000474496 TBC1D2BQ9UPU7 963 aa13.63□□□□□ -0.23
TRAF3IP3-210ENST00000474496 PNPLA7Q6ZV29 1317 aa13.63□□□□□ -0.23
TRAF3IP3-210ENST00000474496 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 EIF5P55010 431 aaKnown RBP13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 PROSER3Q2NL68 480 aa13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 DZIP3Q86Y13 1208 aaKnown RBP13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 COL23A1Q86Y22 540 aaPredicted RBP13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
TRAF3IP3-210ENST00000474496 DDX58O95786 925 aaKnown RBP13.61□□□□□ -0.23
TRAF3IP3-210ENST00000474496 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
TRAF3IP3-210ENST00000474496 AMIGO3Q86WK7 504 aa13.61□□□□□ -0.23
TRAF3IP3-210ENST00000474496 XAGE3Q8WTP9 111 aa13.61□□□□□ -0.23
TRAF3IP3-210ENST00000474496 BCL2L13Q9BXK5 485 aa13.61□□□□□ -0.23
TRAF3IP3-210ENST00000474496 UBR3Q6ZT12 1888 aa13.61□□□□□ -0.23
TRAF3IP3-210ENST00000474496 MYH14Q7Z406 1995 aaKnown RBP13.6□□□□□ -0.23
TRAF3IP3-210ENST00000474496 ZBTB7AO95365 584 aa13.6□□□□□ -0.23
TRAF3IP3-210ENST00000474496 USPL1Q5W0Q7 1092 aa13.6□□□□□ -0.23
TRAF3IP3-210ENST00000474496 RIC3Q7Z5B4 369 aa13.6□□□□□ -0.23
TRAF3IP3-210ENST00000474496 ZNF428Q96B54 188 aa13.6□□□□□ -0.23
TRAF3IP3-210ENST00000474496 ZBTB3Q9H5J0 574 aa13.6□□□□□ -0.23
TRAF3IP3-210ENST00000474496 SRP68Q9UHB9 627 aaKnown RBP13.6□□□□□ -0.23
TRAF3IP3-210ENST00000474496 ZNF652Q9Y2D9 606 aa13.6□□□□□ -0.23
TRAF3IP3-210ENST00000474496 TUBGCP6Q96RT7 1819 aa13.6□□□□□ -0.23
TRAF3IP3-210ENST00000474496 FKBP5Q13451 457 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP3-210ENST00000474496 PDIA6Q15084 440 aa13.59□□□□□ -0.23
TRAF3IP3-210ENST00000474496 ALDH1L2Q3SY69 923 aa13.59□□□□□ -0.23
TRAF3IP3-210ENST00000474496 MSL1Q68DK7 614 aa13.59□□□□□ -0.23
TRAF3IP3-210ENST00000474496 TTLL7Q6ZT98 887 aa13.59□□□□□ -0.23
TRAF3IP3-210ENST00000474496 NARFQ9UHQ1 456 aa13.59□□□□□ -0.23
TRAF3IP3-210ENST00000474496 NPHP1O15259 732 aa13.58□□□□□ -0.24
TRAF3IP3-210ENST00000474496 SSH1Q8WYL5 1049 aa13.58□□□□□ -0.24
TRAF3IP3-210ENST00000474496 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP3-210ENST00000474496 PHAXQ9H814 394 aaKnown RBP13.58□□□□□ -0.24
TRAF3IP3-210ENST00000474496 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
TRAF3IP3-210ENST00000474496 QSER1Q2KHR3 1735 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms