RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 AKAP4Q5JQC9 854 aa11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 MRC1P22897 1456 aa11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 C4AP0C0L4 1744 aa11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
TNFRSF9-202ENST00000474475 RPS6KA4O75676 772 aa11.88□□□□□ -0.51
TNFRSF9-202ENST00000474475 MMP10P09238 476 aa11.88□□□□□ -0.51
TNFRSF9-202ENST00000474475 CNGB1Q14028 1251 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF9-202ENST00000474475 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
TNFRSF9-202ENST00000474475 LGR6Q9HBX8 967 aa11.88□□□□□ -0.51
TNFRSF9-202ENST00000474475 KIAA1551Q9HCM1 1747 aa11.87□□□□□ -0.51
TNFRSF9-202ENST00000474475 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
TNFRSF9-202ENST00000474475 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
TNFRSF9-202ENST00000474475 KIF13BQ9NQT8 1826 aa11.86□□□□□ -0.51
TNFRSF9-202ENST00000474475 RNMTO43148 476 aaKnown RBP11.86□□□□□ -0.51
TNFRSF9-202ENST00000474475 GYS1P13807 737 aa11.86□□□□□ -0.51
TNFRSF9-202ENST00000474475 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
TNFRSF9-202ENST00000474475 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
TNFRSF9-202ENST00000474475 NLGN1Q8N2Q7 840 aa11.86□□□□□ -0.51
TNFRSF9-202ENST00000474475 WWC3Q9ULE0 1092 aa11.86□□□□□ -0.51
TNFRSF9-202ENST00000474475 RFC4P35249 363 aa11.85□□□□□ -0.51
TNFRSF9-202ENST00000474475 KCPQ6ZWJ8 1503 aa11.85□□□□□ -0.51
TNFRSF9-202ENST00000474475 PXDNLA1KZ92 1463 aa11.84□□□□□ -0.51
TNFRSF9-202ENST00000474475 UTRNP46939 3433 aa11.84□□□□□ -0.51
TNFRSF9-202ENST00000474475 SLC39A6Q13433 755 aa11.84□□□□□ -0.51
TNFRSF9-202ENST00000474475 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
TNFRSF9-202ENST00000474475 DNAJC10Q8IXB1 793 aa11.84□□□□□ -0.51
TNFRSF9-202ENST00000474475 C10orf71Q711Q0 1435 aa11.84□□□□□ -0.51
TNFRSF9-202ENST00000474475 N4BP2Q86UW6 1770 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF9-202ENST00000474475 UBR2Q8IWV8 1755 aa11.83□□□□□ -0.52
TNFRSF9-202ENST00000474475 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-202ENST00000474475 SRP68Q9UHB9 627 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-202ENST00000474475 USP42Q9H9J4 1324 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-202ENST00000474475 CCDC87Q9NVE4 849 aa11.82□□□□□ -0.52
TNFRSF9-202ENST00000474475 ADCY9O60503 1353 aa11.81□□□□□ -0.52
TNFRSF9-202ENST00000474475 ATP10DQ9P241 1426 aa11.81□□□□□ -0.52
TNFRSF9-202ENST00000474475 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
TNFRSF9-202ENST00000474475 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF9-202ENST00000474475 TGFB2P61812 414 aa11.81□□□□□ -0.52
TNFRSF9-202ENST00000474475 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF9-202ENST00000474475 PARP3Q9Y6F1 533 aa11.81□□□□□ -0.52
TNFRSF9-202ENST00000474475 SIPA1L3O60292 1781 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF9-202ENST00000474475 SOS1Q07889 1333 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF9-202ENST00000474475 DDR1Q08345 913 aa11.8□□□□□ -0.52
TNFRSF9-202ENST00000474475 IL17REQ8NFR9 667 aa11.8□□□□□ -0.52
TNFRSF9-202ENST00000474475 PHACTR3Q96KR7 559 aa11.8□□□□□ -0.52
TNFRSF9-202ENST00000474475 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
TNFRSF9-202ENST00000474475 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
TNFRSF9-202ENST00000474475 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF9-202ENST00000474475 DPEP1P16444 411 aa11.79□□□□□ -0.52
TNFRSF9-202ENST00000474475 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
TNFRSF9-202ENST00000474475 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
TNFRSF9-202ENST00000474475 GAS2L2Q8NHY3 880 aa11.79□□□□□ -0.52
TNFRSF9-202ENST00000474475 RSPH6AQ9H0K4 717 aa11.79□□□□□ -0.52
TNFRSF9-202ENST00000474475 ZBTB1Q9Y2K1 713 aa11.79□□□□□ -0.52
TNFRSF9-202ENST00000474475 TM4SF1P30408 202 aa11.78□□□□□ -0.52
TNFRSF9-202ENST00000474475 PRKAR2BP31323 418 aa11.78□□□□□ -0.52
TNFRSF9-202ENST00000474475 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
TNFRSF9-202ENST00000474475 CFAP53Q96M91 514 aa11.78□□□□□ -0.52
TNFRSF9-202ENST00000474475 BCS1LQ9Y276 419 aa11.78□□□□□ -0.52
TNFRSF9-202ENST00000474475 COL15A1P39059 1388 aa11.78□□□□□ -0.52
TNFRSF9-202ENST00000474475 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.53
TNFRSF9-202ENST00000474475 ZPR1O75312 459 aa11.77□□□□□ -0.53
TNFRSF9-202ENST00000474475 KCNA3P22001 575 aa11.77□□□□□ -0.53
TNFRSF9-202ENST00000474475 TEFQ10587 303 aa11.77□□□□□ -0.53
TNFRSF9-202ENST00000474475 TTC5Q8N0Z6 440 aa11.77□□□□□ -0.53
TNFRSF9-202ENST00000474475 ZNF496Q96IT1 587 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF9-202ENST00000474475 NARFQ9UHQ1 456 aa11.77□□□□□ -0.53
TNFRSF9-202ENST00000474475 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
TNFRSF9-202ENST00000474475 ZNF790Q6PG37 636 aa11.76□□□□□ -0.53
TNFRSF9-202ENST00000474475 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF9-202ENST00000474475 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
TNFRSF9-202ENST00000474475 HEG1Q9ULI3 1381 aa11.76□□□□□ -0.53
TNFRSF9-202ENST00000474475 NRXN2Q9P2S2 1712 aa11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 AFDNP55196 1824 aaKnown RBP11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 ARFGEF1Q9Y6D6 1849 aa11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 FCHSD2O94868 740 aa11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 U2AF1L5P0DN76 240 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 CANXP27824 592 aaKnown RBP11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 U2AF1Q01081 240 aaKnown RBP eCLIP11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 NFIXQ14938 502 aa11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 GPBP1L1Q9HC44 474 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 NUDCQ9Y266 331 aa11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 GOLGB1Q14789 3259 aaKnown RBP11.75□□□□□ -0.53
TNFRSF9-202ENST00000474475 KCNQ3O43525 872 aa11.74□□□□□ -0.53
TNFRSF9-202ENST00000474475 STARD3NLO95772 234 aa11.74□□□□□ -0.53
TNFRSF9-202ENST00000474475 CHRM1P11229 460 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF9-202ENST00000474475 CHRNA5P30532 468 aa11.74□□□□□ -0.53
TNFRSF9-202ENST00000474475 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
TNFRSF9-202ENST00000474475 PIM2Q9P1W9 311 aa11.74□□□□□ -0.53
TNFRSF9-202ENST00000474475 CD44P16070 742 aaKnown RBP11.73□□□□□ -0.53
TNFRSF9-202ENST00000474475 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
TNFRSF9-202ENST00000474475 ARHGAP27Q6ZUM4 889 aa11.73□□□□□ -0.53
TNFRSF9-202ENST00000474475 BTBD11A6QL63 1104 aa11.72□□□□□ -0.53
TNFRSF9-202ENST00000474475 SERPINB2P05120 415 aa11.72□□□□□ -0.53
TNFRSF9-202ENST00000474475 MCM10Q7L590 875 aa11.72□□□□□ -0.53
TNFRSF9-202ENST00000474475 FMNL2Q96PY5 1086 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms