RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 EIF2S2P20042 333 aaKnown RBP17.52■□□□□ 0.4
LDLRAP1-204ENST00000474283 KCNQ4P56696 695 aa17.52■□□□□ 0.4
LDLRAP1-204ENST00000474283 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
LDLRAP1-204ENST00000474283 CCNL1Q9UK58 526 aaPredicted RBP17.52■□□□□ 0.4
LDLRAP1-204ENST00000474283 SRCAPQ6ZRS2 3230 aa17.52■□□□□ 0.39
LDLRAP1-204ENST00000474283 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
LDLRAP1-204ENST00000474283 C4BP0C0L5 1744 aa17.51■□□□□ 0.39
LDLRAP1-204ENST00000474283 ALDH1L2Q3SY69 923 aa17.51■□□□□ 0.39
LDLRAP1-204ENST00000474283 NUP188Q5SRE5 1749 aa17.51■□□□□ 0.39
LDLRAP1-204ENST00000474283 DNAJC10Q8IXB1 793 aa17.51■□□□□ 0.39
LDLRAP1-204ENST00000474283 VSIG10Q8N0Z9 540 aa17.51■□□□□ 0.39
LDLRAP1-204ENST00000474283 SLC4A9Q96Q91 983 aa17.51■□□□□ 0.39
LDLRAP1-204ENST00000474283 PLSCR1O15162 318 aa17.5■□□□□ 0.39
LDLRAP1-204ENST00000474283 BAG6P46379 1132 aa17.5■□□□□ 0.39
LDLRAP1-204ENST00000474283 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
LDLRAP1-204ENST00000474283 TUBGCP6Q96RT7 1819 aa17.49■□□□□ 0.39
LDLRAP1-204ENST00000474283 VAMP4O75379 141 aa17.49■□□□□ 0.39
LDLRAP1-204ENST00000474283 HOXB7P09629 217 aa17.49■□□□□ 0.39
LDLRAP1-204ENST00000474283 EN1Q05925 392 aaPredicted RBP17.49■□□□□ 0.39
LDLRAP1-204ENST00000474283 ITPK1Q13572 414 aa17.49■□□□□ 0.39
LDLRAP1-204ENST00000474283 HDGFL1Q5TGJ6 251 aa17.49■□□□□ 0.39
LDLRAP1-204ENST00000474283 CCDC125Q86Z20 511 aa17.49■□□□□ 0.39
LDLRAP1-204ENST00000474283 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
LDLRAP1-204ENST00000474283 USP16Q9Y5T5 823 aa17.49■□□□□ 0.39
LDLRAP1-204ENST00000474283 UBR3Q6ZT12 1888 aa17.48■□□□□ 0.39
LDLRAP1-204ENST00000474283 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
LDLRAP1-204ENST00000474283 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
LDLRAP1-204ENST00000474283 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
LDLRAP1-204ENST00000474283 STARD3NLO95772 234 aa17.47■□□□□ 0.39
LDLRAP1-204ENST00000474283 RARSP54136 660 aaKnown RBP17.47■□□□□ 0.39
LDLRAP1-204ENST00000474283 EZH2Q15910 746 aaKnown RBP17.47■□□□□ 0.39
LDLRAP1-204ENST00000474283 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
LDLRAP1-204ENST00000474283 DEFB132Q7Z7B7 95 aa17.47■□□□□ 0.39
LDLRAP1-204ENST00000474283 CCDC30Q5VVM6 783 aa17.46■□□□□ 0.39
LDLRAP1-204ENST00000474283 LINC00116Q8NCU8 138 aa17.46■□□□□ 0.39
LDLRAP1-204ENST00000474283 LRRC4BQ9NT99 713 aa17.46■□□□□ 0.39
LDLRAP1-204ENST00000474283 SMC4Q9NTJ3 1288 aa17.46■□□□□ 0.39
LDLRAP1-204ENST00000474283 CYP19A1P11511 503 aaPredicted RBP17.45■□□□□ 0.38
LDLRAP1-204ENST00000474283 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
LDLRAP1-204ENST00000474283 PROM2Q8N271 834 aa17.45■□□□□ 0.38
LDLRAP1-204ENST00000474283 BCL2L13Q9BXK5 485 aa17.45■□□□□ 0.38
LDLRAP1-204ENST00000474283 STK31Q9BXU1 1019 aa17.45■□□□□ 0.38
LDLRAP1-204ENST00000474283 A1BGP04217 495 aa17.44■□□□□ 0.38
LDLRAP1-204ENST00000474283 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
LDLRAP1-204ENST00000474283 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
LDLRAP1-204ENST00000474283 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
LDLRAP1-204ENST00000474283 CAMKK2Q96RR4 588 aa17.44■□□□□ 0.38
LDLRAP1-204ENST00000474283 CHPF2Q9P2E5 772 aa17.44■□□□□ 0.38
LDLRAP1-204ENST00000474283 ANXA1P04083 346 aa17.43■□□□□ 0.38
LDLRAP1-204ENST00000474283 MYL6BP14649 208 aa17.43■□□□□ 0.38
LDLRAP1-204ENST00000474283 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
LDLRAP1-204ENST00000474283 FTSJ3Q8IY81 847 aaKnown RBP17.43■□□□□ 0.38
LDLRAP1-204ENST00000474283 CCDC87Q9NVE4 849 aa17.43■□□□□ 0.38
LDLRAP1-204ENST00000474283 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
LDLRAP1-204ENST00000474283 C4AP0C0L4 1744 aa17.43■□□□□ 0.38
LDLRAP1-204ENST00000474283 NUP98P52948 1817 aa17.42■□□□□ 0.38
LDLRAP1-204ENST00000474283 BRPF1P55201 1214 aaPredicted RBP17.42■□□□□ 0.38
LDLRAP1-204ENST00000474283 SSH1Q8WYL5 1049 aa17.42■□□□□ 0.38
LDLRAP1-204ENST00000474283 DBF4Q9UBU7 674 aaPredicted RBP17.42■□□□□ 0.38
LDLRAP1-204ENST00000474283 ARFGEF2Q9Y6D5 1785 aa17.42■□□□□ 0.38
LDLRAP1-204ENST00000474283 QSER1Q2KHR3 1735 aa17.41■□□□□ 0.38
LDLRAP1-204ENST00000474283 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
LDLRAP1-204ENST00000474283 AK7Q96M32 723 aa17.41■□□□□ 0.38
LDLRAP1-204ENST00000474283 ZBTB1Q9Y2K1 713 aa17.41■□□□□ 0.38
LDLRAP1-204ENST00000474283 AFDNP55196 1824 aaKnown RBP17.41■□□□□ 0.38
LDLRAP1-204ENST00000474283 ERBB4Q15303 1308 aa17.41■□□□□ 0.38
LDLRAP1-204ENST00000474283 CNTNAP4Q9C0A0 1308 aa17.41■□□□□ 0.38
LDLRAP1-204ENST00000474283 BCAR3O75815 825 aa17.4■□□□□ 0.38
LDLRAP1-204ENST00000474283 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
LDLRAP1-204ENST00000474283 PROSER3Q2NL68 480 aa17.4■□□□□ 0.38
LDLRAP1-204ENST00000474283 INTS5Q6P9B9 1019 aaKnown RBP17.4■□□□□ 0.38
LDLRAP1-204ENST00000474283 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
LDLRAP1-204ENST00000474283 DDX21Q9NR30 783 aaKnown RBP eCLIP17.4■□□□□ 0.38
LDLRAP1-204ENST00000474283 BCORQ6W2J9 1755 aa17.39■□□□□ 0.37
LDLRAP1-204ENST00000474283 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
LDLRAP1-204ENST00000474283 GNPATO15228 680 aa17.39■□□□□ 0.37
LDLRAP1-204ENST00000474283 NBPF14Q5TI25 921 aa17.39■□□□□ 0.37
LDLRAP1-204ENST00000474283 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
LDLRAP1-204ENST00000474283 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
LDLRAP1-204ENST00000474283 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
LDLRAP1-204ENST00000474283 ARHGAP45Q92619 1136 aa17.39■□□□□ 0.37
LDLRAP1-204ENST00000474283 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
LDLRAP1-204ENST00000474283 PDIA6Q15084 440 aa17.38■□□□□ 0.37
LDLRAP1-204ENST00000474283 RC3H1Q5TC82 1133 aaKnown RBP17.38■□□□□ 0.37
LDLRAP1-204ENST00000474283 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
LDLRAP1-204ENST00000474283 ARXQ96QS3 562 aa17.38■□□□□ 0.37
LDLRAP1-204ENST00000474283 HYPKQ9NX55 129 aa17.38■□□□□ 0.37
LDLRAP1-204ENST00000474283 AIMP1Q12904 312 aaKnown RBP17.37■□□□□ 0.37
LDLRAP1-204ENST00000474283 G2E3Q7L622 706 aa17.37■□□□□ 0.37
LDLRAP1-204ENST00000474283 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
LDLRAP1-204ENST00000474283 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
LDLRAP1-204ENST00000474283 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
LDLRAP1-204ENST00000474283 SMIM5Q71RC9 77 aa17.36■□□□□ 0.37
LDLRAP1-204ENST00000474283 DZIP1LQ8IYY4 767 aaKnown RBP17.36■□□□□ 0.37
LDLRAP1-204ENST00000474283 RTCBQ9Y3I0 505 aaKnown RBP17.36■□□□□ 0.37
LDLRAP1-204ENST00000474283 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
LDLRAP1-204ENST00000474283 N4BP2Q86UW6 1770 aaPredicted RBP17.35■□□□□ 0.37
LDLRAP1-204ENST00000474283 PLIN1O60240 522 aa17.35■□□□□ 0.37
LDLRAP1-204ENST00000474283 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
LDLRAP1-204ENST00000474283 PHF14O94880 888 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms