RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 SPRYD7Q5W111 196 aa9.49□□□□□ -0.89
GPNMB-209ENST00000474157 TRIM50Q86XT4 487 aa9.49□□□□□ -0.89
GPNMB-209ENST00000474157 CCDC125Q86Z20 511 aa9.49□□□□□ -0.89
GPNMB-209ENST00000474157 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
GPNMB-209ENST00000474157 STK32AQ8WU08 396 aa9.49□□□□□ -0.89
GPNMB-209ENST00000474157 TMEM88BA6NKF7 163 aa9.48□□□□□ -0.89
GPNMB-209ENST00000474157 ERVH48-1M5A8F1 160 aa9.48□□□□□ -0.89
GPNMB-209ENST00000474157 SIAH2O43255 324 aa9.48□□□□□ -0.89
GPNMB-209ENST00000474157 PTMSP20962 102 aa9.48□□□□□ -0.89
GPNMB-209ENST00000474157 CLDN10P78369 228 aa9.48□□□□□ -0.89
GPNMB-209ENST00000474157 ZNF594Q96JF6 807 aaPredicted RBP9.48□□□□□ -0.89
GPNMB-209ENST00000474157 MRGPRX2Q96LB1 330 aa9.48□□□□□ -0.89
GPNMB-209ENST00000474157 KIAA0556O60303 1618 aa9.48□□□□□ -0.89
GPNMB-209ENST00000474157 FHOD3Q2V2M9 1422 aa9.48□□□□□ -0.89
GPNMB-209ENST00000474157 ARHGEF40Q8TER5 1519 aa9.47□□□□□ -0.89
GPNMB-209ENST00000474157 ATP1A2P50993 1020 aa9.47□□□□□ -0.89
GPNMB-209ENST00000474157 GTF2IP78347 998 aa9.47□□□□□ -0.89
GPNMB-209ENST00000474157 ZNF697Q5TEC3 545 aa9.47□□□□□ -0.89
GPNMB-209ENST00000474157 TMEM164Q5U3C3 297 aa9.47□□□□□ -0.89
GPNMB-209ENST00000474157 TAF3Q5VWG9 929 aa9.47□□□□□ -0.89
GPNMB-209ENST00000474157 AEBP1Q8IUX7 1158 aa9.47□□□□□ -0.89
GPNMB-209ENST00000474157 DNAAF2Q9NVR5 837 aaKnown RBP9.47□□□□□ -0.89
GPNMB-209ENST00000474157 TPM2P07951 284 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 GTF2E1P29083 439 aaPredicted RBP9.46□□□□□ -0.9
GPNMB-209ENST00000474157 GRM5P41594 1212 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 USP4Q13107 963 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 SMAP1Q8IYB5 467 aaPredicted RBP9.46□□□□□ -0.9
GPNMB-209ENST00000474157 MPNDQ8N594 471 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 KCTD17Q8N5Z5 321 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 SIRT1Q96EB6 747 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 KIAA1024Q9UPX6 916 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 ABCA8O94911 1581 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 FRMPD1Q5SYB0 1578 aa9.46□□□□□ -0.9
GPNMB-209ENST00000474157 CLGNO14967 610 aa9.45□□□□□ -0.9
GPNMB-209ENST00000474157 ADH1CP00326 375 aa9.45□□□□□ -0.9
GPNMB-209ENST00000474157 PIP4K2BP78356 416 aa9.45□□□□□ -0.9
GPNMB-209ENST00000474157 DPYDQ12882 1025 aa9.45□□□□□ -0.9
GPNMB-209ENST00000474157 UTP14CQ5TAP6 766 aaKnown RBP9.45□□□□□ -0.9
GPNMB-209ENST00000474157 PRKD2Q9BZL6 878 aa9.45□□□□□ -0.9
GPNMB-209ENST00000474157 ZNF335Q9H4Z2 1342 aaPredicted RBP9.45□□□□□ -0.9
GPNMB-209ENST00000474157 ATP10BO94823 1461 aa9.45□□□□□ -0.9
GPNMB-209ENST00000474157 GOLGA3Q08378 1498 aa9.45□□□□□ -0.9
GPNMB-209ENST00000474157 MED1Q15648 1581 aaPredicted RBP9.45□□□□□ -0.9
GPNMB-209ENST00000474157 TTC37Q6PGP7 1564 aa9.45□□□□□ -0.9
GPNMB-209ENST00000474157 ZBTB7CA1YPR0 619 aa9.44□□□□□ -0.9
GPNMB-209ENST00000474157 TOM1O60784 492 aa9.44□□□□□ -0.9
GPNMB-209ENST00000474157 MYCP01106 439 aaPredicted RBP9.44□□□□□ -0.9
GPNMB-209ENST00000474157 PTMAP06454 111 aaKnown RBP9.44□□□□□ -0.9
GPNMB-209ENST00000474157 SCTRP47872 440 aa9.44□□□□□ -0.9
GPNMB-209ENST00000474157 PSME1Q06323 249 aa9.44□□□□□ -0.9
GPNMB-209ENST00000474157 MTERF4Q7Z6M4 381 aaKnown RBP9.44□□□□□ -0.9
GPNMB-209ENST00000474157 ZNF598Q86UK7 904 aaKnown RBP9.44□□□□□ -0.9
GPNMB-209ENST00000474157 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
GPNMB-209ENST00000474157 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
GPNMB-209ENST00000474157 TMPRSS4Q9NRS4 437 aa9.44□□□□□ -0.9
GPNMB-209ENST00000474157 STRCQ7RTU9 1775 aa9.44□□□□□ -0.9
GPNMB-209ENST00000474157 ABCA9Q8IUA7 1624 aa9.43□□□□□ -0.9
GPNMB-209ENST00000474157 MAGI2Q86UL8 1455 aa9.43□□□□□ -0.9
GPNMB-209ENST00000474157 ZBTB7BO15156 539 aaPredicted RBP9.43□□□□□ -0.9
GPNMB-209ENST00000474157 DHX9Q08211 1270 aaKnown RBP9.43□□□□□ -0.9
GPNMB-209ENST00000474157 FOXC1Q12948 553 aa9.43□□□□□ -0.9
GPNMB-209ENST00000474157 CCDC116Q8IYX3 515 aa9.43□□□□□ -0.9
GPNMB-209ENST00000474157 TPCN2Q8NHX9 752 aa9.43□□□□□ -0.9
GPNMB-209ENST00000474157 PCDHGA11Q9Y5H2 935 aa9.43□□□□□ -0.9
GPNMB-209ENST00000474157 PREX1Q8TCU6 1659 aa9.42□□□□□ -0.9
GPNMB-209ENST00000474157 RAPGEF2Q9Y4G8 1499 aa9.42□□□□□ -0.9
GPNMB-209ENST00000474157 NR5A1Q13285 461 aa9.42□□□□□ -0.9
GPNMB-209ENST00000474157 AXDND1Q5T1B0 1012 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-209ENST00000474157 CCDC102BQ68D86 513 aa9.42□□□□□ -0.9
GPNMB-209ENST00000474157 SIX5Q8N196 739 aa9.42□□□□□ -0.9
GPNMB-209ENST00000474157 CYLDQ9NQC7 956 aa9.42□□□□□ -0.9
GPNMB-209ENST00000474157 PPP4R2Q9NY27 417 aa9.42□□□□□ -0.9
GPNMB-209ENST00000474157 ZFYVE16Q7Z3T8 1539 aa9.41□□□□□ -0.9
GPNMB-209ENST00000474157 DKK1O94907 266 aa9.41□□□□□ -0.9
GPNMB-209ENST00000474157 ALDH1A1P00352 501 aa9.41□□□□□ -0.9
GPNMB-209ENST00000474157 NR3C2P08235 984 aa9.41□□□□□ -0.9
GPNMB-209ENST00000474157 ERVK-9P63128 1117 aa9.41□□□□□ -0.9
GPNMB-209ENST00000474157 PPP1R26Q5T8A7 1209 aaPredicted RBP9.41□□□□□ -0.9
GPNMB-209ENST00000474157 CC2D2BQ6DHV5 1058 aa9.41□□□□□ -0.9
GPNMB-209ENST00000474157 ZNF784Q8NCA9 323 aaPredicted RBP9.41□□□□□ -0.9
GPNMB-209ENST00000474157 ESF1Q9H501 851 aaKnown RBP9.41□□□□□ -0.9
GPNMB-209ENST00000474157 PKD2L1Q9P0L9 805 aa9.41□□□□□ -0.9
GPNMB-209ENST00000474157 V9GY48 417 aaPredicted RBP9.41□□□□□ -0.9
GPNMB-209ENST00000474157 EFCAB5A4FU69 1503 aa9.41□□□□□ -0.9
GPNMB-209ENST00000474157 ARHGEF12Q9NZN5 1544 aa9.41□□□□□ -0.9
GPNMB-209ENST00000474157 NCOA1Q15788 1441 aa9.4□□□□□ -0.9
GPNMB-209ENST00000474157 BRD1O95696 1058 aa9.4□□□□□ -0.9
GPNMB-209ENST00000474157 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
GPNMB-209ENST00000474157 PLEKHD1A6NEE1 506 aa9.39□□□□□ -0.91
GPNMB-209ENST00000474157 SEC13P55735 322 aa9.39□□□□□ -0.91
GPNMB-209ENST00000474157 TICAM2Q86XR7 235 aa9.39□□□□□ -0.91
GPNMB-209ENST00000474157 PNNQ9H307 717 aaKnown RBP9.39□□□□□ -0.91
GPNMB-209ENST00000474157 CHMP4BQ9H444 224 aaKnown RBP9.39□□□□□ -0.91
GPNMB-209ENST00000474157 ATP10AO60312 1499 aa9.39□□□□□ -0.91
GPNMB-209ENST00000474157 TRAPPC8Q9Y2L5 1435 aa9.39□□□□□ -0.91
GPNMB-209ENST00000474157 SFI1A8K8P3 1242 aa9.38□□□□□ -0.91
GPNMB-209ENST00000474157 MCCP23508 829 aa9.38□□□□□ -0.91
GPNMB-209ENST00000474157 TERF1P54274 439 aa9.38□□□□□ -0.91
GPNMB-209ENST00000474157 TRIM44Q96DX7 344 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms