RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ZNF330Q9Y3S2 320 aaPredicted RBP8.04□□□□□ -1.12
ATPAF1-204ENST00000474020 CCDC7Q96M83 1385 aa8.04□□□□□ -1.12
ATPAF1-204ENST00000474020 MAST1Q9Y2H9 1570 aa8.04□□□□□ -1.12
ATPAF1-204ENST00000474020 MYO5CQ9NQX4 1742 aa8.03□□□□□ -1.12
ATPAF1-204ENST00000474020 SAMD9LQ8IVG5 1584 aa8.03□□□□□ -1.12
ATPAF1-204ENST00000474020 ROCK2O75116 1388 aaKnown RBP8.03□□□□□ -1.12
ATPAF1-204ENST00000474020 H3BM21 787 aa8.03□□□□□ -1.12
ATPAF1-204ENST00000474020 LILRA1O75019 489 aa8.03□□□□□ -1.12
ATPAF1-204ENST00000474020 INSM1Q01101 510 aaPredicted RBP8.03□□□□□ -1.12
ATPAF1-204ENST00000474020 CCDC125Q86Z20 511 aa8.03□□□□□ -1.12
ATPAF1-204ENST00000474020 DNMT3LQ9UJW3 386 aa8.03□□□□□ -1.12
ATPAF1-204ENST00000474020 MBD5Q9P267 1494 aa8.02□□□□□ -1.13
ATPAF1-204ENST00000474020 TTLL8A6PVC2 850 aa8.02□□□□□ -1.13
ATPAF1-204ENST00000474020 ZNF326Q5BKZ1 582 aaKnown RBP8.02□□□□□ -1.13
ATPAF1-204ENST00000474020 CLASP1Q7Z460 1538 aa8.02□□□□□ -1.13
ATPAF1-204ENST00000474020 SYCP2Q9BX26 1530 aa8.02□□□□□ -1.13
ATPAF1-204ENST00000474020 WASHC2AQ641Q2 1341 aa8.02□□□□□ -1.13
ATPAF1-204ENST00000474020 PLXNC1O60486 1568 aa8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 GIGYF1O75420 1035 aaPredicted RBP8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 ADH1AP07327 375 aa8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 VEGFBP49765 207 aa8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 AGBL1Q96MI9 1066 aa8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 DUOX2Q9NRD8 1548 aa8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 CCDC144AA2RUR9 1427 aa8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 PLCH2O75038 1416 aa8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 UHRF1BP1Q6BDS2 1440 aa8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 ERBINQ96RT1 1412 aa8.01□□□□□ -1.13
ATPAF1-204ENST00000474020 USP47Q96K76 1375 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 ARAP3Q8WWN8 1544 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 FAM135AQ9P2D6 1515 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 ADD1P35611 737 aaKnown RBP8□□□□□ -1.13
ATPAF1-204ENST00000474020 RELBQ01201 579 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8□□□□□ -1.13
ATPAF1-204ENST00000474020 RNF20Q5VTR2 975 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 PRM3Q9NNZ6 103 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 TBC1D2BQ9UPU7 963 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 TTC37Q6PGP7 1564 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 CDC42BPBQ9Y5S2 1711 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 RALGAPBQ86X10 1494 aa8□□□□□ -1.13
ATPAF1-204ENST00000474020 NBPF8Q3BBV2 869 aa7.99□□□□□ -1.13
ATPAF1-204ENST00000474020 CARD11Q9BXL7 1154 aa7.99□□□□□ -1.13
ATPAF1-204ENST00000474020 SUPT16HQ9Y5B9 1047 aaKnown RBP7.99□□□□□ -1.13
ATPAF1-204ENST00000474020 ZCCHC11Q5TAX3 1644 aaKnown RBP7.99□□□□□ -1.13
ATPAF1-204ENST00000474020 UNC13BO14795 1591 aa7.98□□□□□ -1.13
ATPAF1-204ENST00000474020 PTGIRP43119 386 aa7.98□□□□□ -1.13
ATPAF1-204ENST00000474020 KDF1Q8NAX2 398 aaPredicted RBP7.98□□□□□ -1.13
ATPAF1-204ENST00000474020 CYLDQ9NQC7 956 aa7.98□□□□□ -1.13
ATPAF1-204ENST00000474020 KIF7Q2M1P5 1343 aa7.98□□□□□ -1.13
ATPAF1-204ENST00000474020 KANK1Q14678 1352 aa7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 PPFIA3O75145 1194 aa7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 VSIG8P0DPA2 414 aa7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 CTSOP43234 321 aaPredicted RBP7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 HNRNPUQ00839 825 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 INSM2Q96T92 566 aaPredicted RBP7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 ZNF395Q9H8N7 513 aaPredicted RBP7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 POLR1AO95602 1720 aaPredicted RBP7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 SPAG9O60271 1321 aaKnown RBP7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 ERBB4Q15303 1308 aa7.97□□□□□ -1.13
ATPAF1-204ENST00000474020 RTEL1-TNFRSF6BF6WH68 1400 aa7.96□□□□□ -1.13
ATPAF1-204ENST00000474020 SPATA31E1Q6ZUB1 1445 aa7.96□□□□□ -1.13
ATPAF1-204ENST00000474020 FIGNL2A6NMB9 653 aa7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 GMPRP36959 345 aa7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 ERVK-9P63128 1117 aa7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 DCAF11Q8TEB1 546 aa7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 POLR3GLQ9BT43 218 aa7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 MRS2Q9HD23 443 aa7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 POLMQ9NP87 494 aaPredicted RBP7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 ABCC1P33527 1531 aa7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 KTN1Q86UP2 1357 aaKnown RBP7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 EIF2AK4Q9P2K8 1649 aaKnown RBP7.96□□□□□ -1.14
ATPAF1-204ENST00000474020 WDR7Q9Y4E6 1490 aa7.95□□□□□ -1.14
ATPAF1-204ENST00000474020 PTSQ03393 145 aa7.95□□□□□ -1.14
ATPAF1-204ENST00000474020 IRF5Q13568 498 aa7.95□□□□□ -1.14
ATPAF1-204ENST00000474020 CC2D2BQ6DHV5 1058 aa7.95□□□□□ -1.14
ATPAF1-204ENST00000474020 PRKRIP1Q9H875 184 aaPredicted RBP7.95□□□□□ -1.14
ATPAF1-204ENST00000474020 ERCC6L2Q5T890 1561 aa7.95□□□□□ -1.14
ATPAF1-204ENST00000474020 IQGAP3Q86VI3 1631 aa7.95□□□□□ -1.14
ATPAF1-204ENST00000474020 MCM6Q14566 821 aa7.94□□□□□ -1.14
ATPAF1-204ENST00000474020 RNF217Q8TC41 542 aa7.94□□□□□ -1.14
ATPAF1-204ENST00000474020 KDM5CP41229 1560 aa7.93□□□□□ -1.14
ATPAF1-204ENST00000474020 ATP5J2-PTCD1G3V325 749 aa7.93□□□□□ -1.14
ATPAF1-204ENST00000474020 FOXD4L5Q5VV16 416 aaPredicted RBP7.93□□□□□ -1.14
ATPAF1-204ENST00000474020 CEP126Q9P2H0 1117 aa7.93□□□□□ -1.14
ATPAF1-204ENST00000474020 PCDHB11Q9Y5F2 797 aa7.93□□□□□ -1.14
ATPAF1-204ENST00000474020 ATP10AO60312 1499 aa7.93□□□□□ -1.14
ATPAF1-204ENST00000474020 MAGI2Q86UL8 1455 aa7.93□□□□□ -1.14
ATPAF1-204ENST00000474020 ERICH6BQ5W0A0 696 aa7.92□□□□□ -1.14
ATPAF1-204ENST00000474020 GDPD2Q9HCC8 539 aa7.92□□□□□ -1.14
ATPAF1-204ENST00000474020 SLC35F4A4IF30 521 aa7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 FAM181BA6NEQ2 426 aa7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 SCTRP47872 440 aa7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 RNF144AP50876 292 aaPredicted RBP7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 RALBP1Q15311 655 aa7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 CYP2U1Q7Z449 544 aa7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 PRAG1Q86YV5 1406 aa7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 FANCAO15360 1455 aa7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 LMTK3Q96Q04 1460 aa7.91□□□□□ -1.14
ATPAF1-204ENST00000474020 LAMC1P11047 1609 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms