RNA–Protein interactions for RNA: ENST00000473689.5

IMP4-213, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-213ENST00000473689 GIGYF1O75420 1035 aaPredicted RBP27.65■■■□□ 2.02
IMP4-213ENST00000473689 FCHSD2O94868 740 aa27.65■■■□□ 2.02
IMP4-213ENST00000473689 ATP10DQ9P241 1426 aa27.65■■■□□ 2.02
IMP4-213ENST00000473689 U2AF1L5P0DN76 240 aaPredicted RBP27.64■■■□□ 2.02
IMP4-213ENST00000473689 U2AF1Q01081 240 aaKnown RBP eCLIP27.64■■■□□ 2.02
IMP4-213ENST00000473689 BCS1LQ9Y276 419 aa27.64■■■□□ 2.02
IMP4-213ENST00000473689 STARD3NLO95772 234 aa27.63■■■□□ 2.01
IMP4-213ENST00000473689 BCL2L12Q9HB09 334 aa27.63■■■□□ 2.01
IMP4-213ENST00000473689 KIAA1551Q9HCM1 1747 aa27.63■■■□□ 2.01
IMP4-213ENST00000473689 COL15A1P39059 1388 aa27.62■■■□□ 2.01
IMP4-213ENST00000473689 HEG1Q9ULI3 1381 aa27.62■■■□□ 2.01
IMP4-213ENST00000473689 EIF5P55010 431 aaKnown RBP27.62■■■□□ 2.01
IMP4-213ENST00000473689 TEX13AQ9BXU3 409 aaPredicted RBP27.62■■■□□ 2.01
IMP4-213ENST00000473689 CANXP27824 592 aaKnown RBP27.61■■■□□ 2.01
IMP4-213ENST00000473689 NFIXQ14938 502 aa27.6■■■□□ 2.01
IMP4-213ENST00000473689 UBR2Q8IWV8 1755 aa27.58■■■□□ 2.01
IMP4-213ENST00000473689 KCNQ3O43525 872 aa27.58■■■□□ 2.01
IMP4-213ENST00000473689 FMNL2Q96PY5 1086 aa27.58■■■□□ 2.01
IMP4-213ENST00000473689 PIM2Q9P1W9 311 aa27.58■■■□□ 2.01
IMP4-213ENST00000473689 BTBD11A6QL63 1104 aa27.57■■■□□ 2
IMP4-213ENST00000473689 GPBP1L1Q9HC44 474 aaPredicted RBP27.57■■■□□ 2
IMP4-213ENST00000473689 A0A087WZG4 1122 aa27.55■■■□□ 2
IMP4-213ENST00000473689 ARHGAP27Q6ZUM4 889 aa27.55■■■□□ 2
IMP4-213ENST00000473689 N4BP2Q86UW6 1770 aaPredicted RBP27.55■■■□□ 2
IMP4-213ENST00000473689 VIRMAQ69YN4 1812 aaKnown RBP27.55■■■□□ 2
IMP4-213ENST00000473689 HTATSF1O43719 755 aaKnown RBP27.54■■■□□ 2
IMP4-213ENST00000473689 CHRNA5P30532 468 aa27.54■■■□□ 2
IMP4-213ENST00000473689 MCM10Q7L590 875 aa27.54■■■□□ 2
IMP4-213ENST00000473689 SERPINB2P05120 415 aa27.53■■■□□ 2
IMP4-213ENST00000473689 IL6STP40189 918 aaPredicted RBP27.53■■■□□ 2
IMP4-213ENST00000473689 RTF1Q92541 710 aaKnown RBP27.53■■■□□ 2
IMP4-213ENST00000473689 A1BGP04217 495 aa27.52■■■□□ 2
IMP4-213ENST00000473689 DALRD3Q5D0E6 543 aaKnown RBP27.52■■■□□ 2
IMP4-213ENST00000473689 SIPA1L3O60292 1781 aaPredicted RBP27.51■■□□□ 1.99
IMP4-213ENST00000473689 SENP3-EIF4A1A0A087X0R7 540 aa27.51■■□□□ 1.99
IMP4-213ENST00000473689 ZNF526Q8TF50 670 aaPredicted RBP27.51■■□□□ 1.99
IMP4-213ENST00000473689 USP16Q9Y5T5 823 aa27.51■■□□□ 1.99
IMP4-213ENST00000473689 DCTN1Q14203 1278 aa27.5■■□□□ 1.99
IMP4-213ENST00000473689 TBC1D2BQ9UPU7 963 aa27.49■■□□□ 1.99
IMP4-213ENST00000473689 TBC1D9BQ66K14 1250 aa27.47■■□□□ 1.99
IMP4-213ENST00000473689 PLEKHF1Q96S99 279 aa27.47■■□□□ 1.99
IMP4-213ENST00000473689 PRAMEF22A3QJZ6 481 aa27.46■■□□□ 1.99
IMP4-213ENST00000473689 SNRPA1P09661 255 aaKnown RBP27.46■■□□□ 1.99
IMP4-213ENST00000473689 BICDL1Q6ZP65 573 aa27.46■■□□□ 1.99
IMP4-213ENST00000473689 TAF7Q15545 349 aaPredicted RBP27.45■■□□□ 1.98
IMP4-213ENST00000473689 ZNF330Q9Y3S2 320 aaPredicted RBP27.45■■□□□ 1.98
IMP4-213ENST00000473689 BRCA1P38398 1863 aaKnown RBP27.44■■□□□ 1.98
IMP4-213ENST00000473689 KIF3CO14782 793 aa27.44■■□□□ 1.98
IMP4-213ENST00000473689 CAMTA2O94983 1202 aa27.44■■□□□ 1.98
IMP4-213ENST00000473689 NRXN2Q9P2S2 1712 aa27.43■■□□□ 1.98
IMP4-213ENST00000473689 C9orf131Q5VYM1 1079 aa27.42■■□□□ 1.98
IMP4-213ENST00000473689 CARMIL3Q8ND23 1372 aa27.41■■□□□ 1.98
IMP4-213ENST00000473689 PIP4K2AP48426 406 aaPredicted RBP27.4■■□□□ 1.98
IMP4-213ENST00000473689 NPM2Q86SE8 214 aaKnown RBP27.4■■□□□ 1.98
IMP4-213ENST00000473689 DZIP3Q86Y13 1208 aaKnown RBP27.4■■□□□ 1.98
IMP4-213ENST00000473689 MIS18AQ9NYP9 233 aa27.4■■□□□ 1.98
IMP4-213ENST00000473689 NEFMP07197 916 aa27.39■■□□□ 1.98
IMP4-213ENST00000473689 C2CD5Q86YS7 1000 aa27.39■■□□□ 1.98
IMP4-213ENST00000473689 NBPF26B4DH59 902 aa27.38■■□□□ 1.97
IMP4-213ENST00000473689 H0YIN7 160 aa27.38■■□□□ 1.97
IMP4-213ENST00000473689 RALBP1Q15311 655 aa27.38■■□□□ 1.97
IMP4-213ENST00000473689 PRR5LQ6MZQ0 368 aa27.38■■□□□ 1.97
IMP4-213ENST00000473689 NBPF10Q6P3W6 841 aaKnown RBP27.38■■□□□ 1.97
IMP4-213ENST00000473689 NBPF15Q8N660 670 aa27.38■■□□□ 1.97
IMP4-213ENST00000473689 TTLL6Q8N841 843 aa27.38■■□□□ 1.97
IMP4-213ENST00000473689 BRIP1Q9BX63 1249 aa27.38■■□□□ 1.97
IMP4-213ENST00000473689 NFE2L2Q16236 605 aa27.37■■□□□ 1.97
IMP4-213ENST00000473689 SETDB2Q96T68 719 aa27.37■■□□□ 1.97
IMP4-213ENST00000473689 AFDNP55196 1824 aaKnown RBP27.37■■□□□ 1.97
IMP4-213ENST00000473689 ARFGEF1Q9Y6D6 1849 aa27.37■■□□□ 1.97
IMP4-213ENST00000473689 CLEC4GQ6UXB4 293 aa27.36■■□□□ 1.97
IMP4-213ENST00000473689 PNISRQ8TF01 805 aaKnown RBP27.36■■□□□ 1.97
IMP4-213ENST00000473689 PNNQ9H307 717 aaKnown RBP27.36■■□□□ 1.97
IMP4-213ENST00000473689 PDZRN3Q9UPQ7 1066 aa27.35■■□□□ 1.97
IMP4-213ENST00000473689 PDE6BP35913 854 aa27.34■■□□□ 1.97
IMP4-213ENST00000473689 CCDC24Q8N4L8 307 aa27.34■■□□□ 1.97
IMP4-213ENST00000473689 RNF181Q9P0P0 153 aa27.34■■□□□ 1.97
IMP4-213ENST00000473689 SCN7AQ01118 1682 aa27.33■■□□□ 1.97
IMP4-213ENST00000473689 RGL2O15211 777 aa27.32■■□□□ 1.96
IMP4-213ENST00000473689 DDX10Q13206 875 aaKnown RBP27.32■■□□□ 1.96
IMP4-213ENST00000473689 THUMPD2Q9BTF0 503 aaKnown RBP27.32■■□□□ 1.96
IMP4-213ENST00000473689 NMRK2Q9NPI5 230 aa27.32■■□□□ 1.96
IMP4-213ENST00000473689 EIF4A1P60842 406 aaKnown RBP27.31■■□□□ 1.96
IMP4-213ENST00000473689 HSPA6P17066 643 aa27.3■■□□□ 1.96
IMP4-213ENST00000473689 PRELPP51888 382 aa27.3■■□□□ 1.96
IMP4-213ENST00000473689 RASSF7Q02833 373 aa27.3■■□□□ 1.96
IMP4-213ENST00000473689 CNBD1Q8NA66 436 aa27.3■■□□□ 1.96
IMP4-213ENST00000473689 TOMM70O94826 608 aa27.29■■□□□ 1.96
IMP4-213ENST00000473689 MAPK8IP3Q9UPT6 1336 aa27.29■■□□□ 1.96
IMP4-213ENST00000473689 ZNF622Q969S3 477 aaKnown RBP eCLIP27.28■■□□□ 1.96
IMP4-213ENST00000473689 ZNF652Q9Y2D9 606 aa27.28■■□□□ 1.96
IMP4-213ENST00000473689 LMNB1P20700 586 aa27.27■■□□□ 1.96
IMP4-213ENST00000473689 NFKBIEO00221 500 aa27.26■■□□□ 1.95
IMP4-213ENST00000473689 SRGNP10124 158 aa27.26■■□□□ 1.95
IMP4-213ENST00000473689 ST5P78524 1137 aa27.26■■□□□ 1.95
IMP4-213ENST00000473689 NBPF5PQ86XG9 351 aaPredicted RBP27.25■■□□□ 1.95
IMP4-213ENST00000473689 KDM2BQ8NHM5 1336 aa27.24■■□□□ 1.95
IMP4-213ENST00000473689 ZC3H4Q9UPT8 1303 aaKnown RBP27.24■■□□□ 1.95
IMP4-213ENST00000473689 HLFQ16534 295 aa27.24■■□□□ 1.95
IMP4-213ENST00000473689 STYK1Q6J9G0 422 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms