RNA–Protein interactions for RNA: ENST00000473652.1

TFAP2A-209, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 3

Gene TFAP2A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-209ENST00000473652 C4AP0C0L4 1744 aa23.19■■□□□ 1.3
TFAP2A-209ENST00000473652 ZNF316A6NFI3 1004 aaPredicted RBP23.19■■□□□ 1.3
TFAP2A-209ENST00000473652 TAF7Q15545 349 aaPredicted RBP23.19■■□□□ 1.3
TFAP2A-209ENST00000473652 NLGN2Q8NFZ4 835 aa23.19■■□□□ 1.3
TFAP2A-209ENST00000473652 PARP3Q9Y6F1 533 aa23.19■■□□□ 1.3
TFAP2A-209ENST00000473652 COL15A1P39059 1388 aa23.18■■□□□ 1.3
TFAP2A-209ENST00000473652 A0A087WZG4 1122 aa23.18■■□□□ 1.3
TFAP2A-209ENST00000473652 LMOD3Q0VAK6 560 aa23.18■■□□□ 1.3
TFAP2A-209ENST00000473652 ZBTB1Q9Y2K1 713 aa23.18■■□□□ 1.3
TFAP2A-209ENST00000473652 CANXP27824 592 aaKnown RBP23.17■■□□□ 1.3
TFAP2A-209ENST00000473652 YY1P25490 414 aa23.16■■□□□ 1.3
TFAP2A-209ENST00000473652 SRP68Q9UHB9 627 aaKnown RBP23.16■■□□□ 1.3
TFAP2A-209ENST00000473652 SNRPA1P09661 255 aaKnown RBP23.15■■□□□ 1.3
TFAP2A-209ENST00000473652 DLG5Q8TDM6 1919 aa23.15■■□□□ 1.3
TFAP2A-209ENST00000473652 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
TFAP2A-209ENST00000473652 ZNF330Q9Y3S2 320 aaPredicted RBP23.14■■□□□ 1.29
TFAP2A-209ENST00000473652 KCNQ3O43525 872 aa23.13■■□□□ 1.29
TFAP2A-209ENST00000473652 GRIN3BO60391 1043 aa23.13■■□□□ 1.29
TFAP2A-209ENST00000473652 RIPK4P57078 832 aa23.13■■□□□ 1.29
TFAP2A-209ENST00000473652 USPL1Q5W0Q7 1092 aa23.13■■□□□ 1.29
TFAP2A-209ENST00000473652 FKBP8Q14318 412 aa23.12■■□□□ 1.29
TFAP2A-209ENST00000473652 IL6STP40189 918 aaPredicted RBP23.11■■□□□ 1.29
TFAP2A-209ENST00000473652 RUNDC1Q96C34 613 aa23.11■■□□□ 1.29
TFAP2A-209ENST00000473652 TMPOP42166 694 aaKnown RBP23.1■■□□□ 1.29
TFAP2A-209ENST00000473652 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
TFAP2A-209ENST00000473652 CCDC146Q8IYE0 955 aa23.09■■□□□ 1.29
TFAP2A-209ENST00000473652 THUMPD2Q9BTF0 503 aaKnown RBP23.09■■□□□ 1.29
TFAP2A-209ENST00000473652 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.29
TFAP2A-209ENST00000473652 TGFB2P61812 414 aa23.08■■□□□ 1.29
TFAP2A-209ENST00000473652 MIS18AQ9NYP9 233 aa23.08■■□□□ 1.29
TFAP2A-209ENST00000473652 ANP32CO43423 234 aa23.07■■□□□ 1.28
TFAP2A-209ENST00000473652 A1BGP04217 495 aa23.07■■□□□ 1.28
TFAP2A-209ENST00000473652 ADAMTS8Q9UP79 889 aa23.07■■□□□ 1.28
TFAP2A-209ENST00000473652 NEUROD2Q15784 382 aa23.06■■□□□ 1.28
TFAP2A-209ENST00000473652 TSPYL4Q9UJ04 414 aa23.06■■□□□ 1.28
TFAP2A-209ENST00000473652 USP16Q9Y5T5 823 aa23.06■■□□□ 1.28
TFAP2A-209ENST00000473652 CHD4Q14839 1912 aa23.06■■□□□ 1.28
TFAP2A-209ENST00000473652 DDR1Q08345 913 aa23.05■■□□□ 1.28
TFAP2A-209ENST00000473652 RRP7AQ9Y3A4 280 aaKnown RBP23.05■■□□□ 1.28
TFAP2A-209ENST00000473652 KDM3BQ7LBC6 1761 aa23.04■■□□□ 1.28
TFAP2A-209ENST00000473652 KIF13BQ9NQT8 1826 aa23.04■■□□□ 1.28
TFAP2A-209ENST00000473652 BABAM1Q9NWV8 329 aa23.04■■□□□ 1.28
TFAP2A-209ENST00000473652 POLRMTO00411 1230 aaKnown RBP23.03■■□□□ 1.28
TFAP2A-209ENST00000473652 YBX3P16989 372 aaKnown RBP eCLIP23.03■■□□□ 1.28
TFAP2A-209ENST00000473652 TM4SF1P30408 202 aa23.03■■□□□ 1.28
TFAP2A-209ENST00000473652 NFIXQ14938 502 aa23.03■■□□□ 1.28
TFAP2A-209ENST00000473652 DZIP3Q86Y13 1208 aaKnown RBP23.03■■□□□ 1.28
TFAP2A-209ENST00000473652 TBC1D2BQ9UPU7 963 aa23.03■■□□□ 1.28
TFAP2A-209ENST00000473652 PXDNLA1KZ92 1463 aa23.03■■□□□ 1.28
TFAP2A-209ENST00000473652 PRAMEF22A3QJZ6 481 aa23.02■■□□□ 1.28
TFAP2A-209ENST00000473652 EIF4A1P60842 406 aaKnown RBP23.02■■□□□ 1.28
TFAP2A-209ENST00000473652 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
TFAP2A-209ENST00000473652 LAMB4A4D0S4 1761 aa23.01■■□□□ 1.27
TFAP2A-209ENST00000473652 SCN7AQ01118 1682 aa23.01■■□□□ 1.27
TFAP2A-209ENST00000473652 GIGYF1O75420 1035 aaPredicted RBP23■■□□□ 1.27
TFAP2A-209ENST00000473652 BICDL1Q6ZP65 573 aa23■■□□□ 1.27
TFAP2A-209ENST00000473652 BCL2L12Q9HB09 334 aa23■■□□□ 1.27
TFAP2A-209ENST00000473652 WWC3Q9ULE0 1092 aa23■■□□□ 1.27
TFAP2A-209ENST00000473652 A0A0G2JLW4 131 aa22.99■■□□□ 1.27
TFAP2A-209ENST00000473652 NPHP1O15259 732 aa22.99■■□□□ 1.27
TFAP2A-209ENST00000473652 SERPINB2P05120 415 aa22.99■■□□□ 1.27
TFAP2A-209ENST00000473652 DPEP1P16444 411 aa22.98■■□□□ 1.27
TFAP2A-209ENST00000473652 PIP4K2AP48426 406 aaPredicted RBP22.98■■□□□ 1.27
TFAP2A-209ENST00000473652 CARMIL3Q8ND23 1372 aa22.98■■□□□ 1.27
TFAP2A-209ENST00000473652 CAMTA2O94983 1202 aa22.97■■□□□ 1.27
TFAP2A-209ENST00000473652 CALD1Q05682 793 aaKnown RBP22.97■■□□□ 1.27
TFAP2A-209ENST00000473652 SETDB2Q96T68 719 aa22.97■■□□□ 1.27
TFAP2A-209ENST00000473652 BCS1LQ9Y276 419 aa22.97■■□□□ 1.27
TFAP2A-209ENST00000473652 TBC1D9BQ66K14 1250 aa22.96■■□□□ 1.27
TFAP2A-209ENST00000473652 CLEC4GQ6UXB4 293 aa22.96■■□□□ 1.27
TFAP2A-209ENST00000473652 PIM2Q9P1W9 311 aa22.96■■□□□ 1.27
TFAP2A-209ENST00000473652 LAS1LQ9Y4W2 734 aaKnown RBP22.96■■□□□ 1.27
TFAP2A-209ENST00000473652 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
TFAP2A-209ENST00000473652 NBPF26B4DH59 902 aa22.95■■□□□ 1.26
TFAP2A-209ENST00000473652 RGL2O15211 777 aa22.95■■□□□ 1.26
TFAP2A-209ENST00000473652 ERBB4Q15303 1308 aa22.95■■□□□ 1.26
TFAP2A-209ENST00000473652 NBPF10Q6P3W6 841 aaKnown RBP22.95■■□□□ 1.26
TFAP2A-209ENST00000473652 NBPF15Q8N660 670 aa22.95■■□□□ 1.26
TFAP2A-209ENST00000473652 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
TFAP2A-209ENST00000473652 TRIM35Q9UPQ4 493 aa22.94■■□□□ 1.26
TFAP2A-209ENST00000473652 BCORQ6W2J9 1755 aa22.94■■□□□ 1.26
TFAP2A-209ENST00000473652 APAF1O14727 1248 aa22.93■■□□□ 1.26
TFAP2A-209ENST00000473652 KIF6Q6ZMV9 814 aa22.93■■□□□ 1.26
TFAP2A-209ENST00000473652 KIAA1551Q9HCM1 1747 aa22.93■■□□□ 1.26
TFAP2A-209ENST00000473652 AFDNP55196 1824 aaKnown RBP22.92■■□□□ 1.26
TFAP2A-209ENST00000473652 NRXN2Q9P2S2 1712 aa22.92■■□□□ 1.26
TFAP2A-209ENST00000473652 DALRD3Q5D0E6 543 aaKnown RBP22.92■■□□□ 1.26
TFAP2A-209ENST00000473652 CNBD1Q8NA66 436 aa22.92■■□□□ 1.26
TFAP2A-209ENST00000473652 PDZRN3Q9UPQ7 1066 aa22.92■■□□□ 1.26
TFAP2A-209ENST00000473652 CHL1O00533 1208 aa22.91■■□□□ 1.26
TFAP2A-209ENST00000473652 ST5P78524 1137 aa22.91■■□□□ 1.26
TFAP2A-209ENST00000473652 NGEFQ8N5V2 710 aa22.91■■□□□ 1.26
TFAP2A-209ENST00000473652 MYL6BP14649 208 aa22.9■■□□□ 1.26
TFAP2A-209ENST00000473652 EIF2S2P20042 333 aaKnown RBP22.9■■□□□ 1.26
TFAP2A-209ENST00000473652 CHRNA5P30532 468 aa22.9■■□□□ 1.26
TFAP2A-209ENST00000473652 H0YIN7 160 aa22.89■■□□□ 1.25
TFAP2A-209ENST00000473652 PDE6BP35913 854 aa22.89■■□□□ 1.25
TFAP2A-209ENST00000473652 NBPF5PQ86XG9 351 aaPredicted RBP22.89■■□□□ 1.25
TFAP2A-209ENST00000473652 ZNF784Q8NCA9 323 aaPredicted RBP22.89■■□□□ 1.25
TFAP2A-209ENST00000473652 CFAP44Q96MT7 982 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms