RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
SMG5-203ENST00000473643 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
SMG5-203ENST00000473643 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
SMG5-203ENST00000473643 COL24A1Q17RW2 1714 aa11.85□□□□□ -0.51
SMG5-203ENST00000473643 TUBGCP6Q96RT7 1819 aa11.84□□□□□ -0.51
SMG5-203ENST00000473643 GNAI1P63096 354 aa11.84□□□□□ -0.51
SMG5-203ENST00000473643 TEFQ10587 303 aa11.84□□□□□ -0.51
SMG5-203ENST00000473643 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
SMG5-203ENST00000473643 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
SMG5-203ENST00000473643 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
SMG5-203ENST00000473643 CD2APQ9Y5K6 639 aa11.84□□□□□ -0.51
SMG5-203ENST00000473643 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
SMG5-203ENST00000473643 MRC1P22897 1456 aa11.83□□□□□ -0.52
SMG5-203ENST00000473643 CRKLP46109 303 aaKnown RBP11.83□□□□□ -0.52
SMG5-203ENST00000473643 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
SMG5-203ENST00000473643 NLGN1Q8N2Q7 840 aa11.83□□□□□ -0.52
SMG5-203ENST00000473643 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
SMG5-203ENST00000473643 CYP19A1P11511 503 aaPredicted RBP11.82□□□□□ -0.52
SMG5-203ENST00000473643 NLGN2Q8NFZ4 835 aa11.82□□□□□ -0.52
SMG5-203ENST00000473643 MYH16Q9H6N6 1097 aa11.82□□□□□ -0.52
SMG5-203ENST00000473643 UBR3Q6ZT12 1888 aa11.81□□□□□ -0.52
SMG5-203ENST00000473643 GYS1P13807 737 aa11.81□□□□□ -0.52
SMG5-203ENST00000473643 RFC4P35249 363 aa11.81□□□□□ -0.52
SMG5-203ENST00000473643 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
SMG5-203ENST00000473643 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
SMG5-203ENST00000473643 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
SMG5-203ENST00000473643 DLG5Q8TDM6 1919 aa11.81□□□□□ -0.52
SMG5-203ENST00000473643 SCN11AQ9UI33 1791 aa11.81□□□□□ -0.52
SMG5-203ENST00000473643 BTBD11A6QL63 1104 aa11.8□□□□□ -0.52
SMG5-203ENST00000473643 TTC5Q8N0Z6 440 aa11.8□□□□□ -0.52
SMG5-203ENST00000473643 ZNF496Q96IT1 587 aaPredicted RBP11.8□□□□□ -0.52
SMG5-203ENST00000473643 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
SMG5-203ENST00000473643 CCDC87Q9NVE4 849 aa11.8□□□□□ -0.52
SMG5-203ENST00000473643 MMP10P09238 476 aa11.79□□□□□ -0.52
SMG5-203ENST00000473643 YY1P25490 414 aa11.79□□□□□ -0.52
SMG5-203ENST00000473643 GPR162Q16538 588 aa11.79□□□□□ -0.52
SMG5-203ENST00000473643 MIS18AQ9NYP9 233 aa11.79□□□□□ -0.52
SMG5-203ENST00000473643 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
SMG5-203ENST00000473643 KCPQ6ZWJ8 1503 aa11.79□□□□□ -0.52
SMG5-203ENST00000473643 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
SMG5-203ENST00000473643 STARD3NLO95772 234 aa11.78□□□□□ -0.52
SMG5-203ENST00000473643 TSR2Q969E8 191 aaKnown RBP11.78□□□□□ -0.52
SMG5-203ENST00000473643 TEX13AQ9BXU3 409 aaPredicted RBP11.78□□□□□ -0.52
SMG5-203ENST00000473643 LAS1LQ9Y4W2 734 aaKnown RBP11.78□□□□□ -0.52
SMG5-203ENST00000473643 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
SMG5-203ENST00000473643 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
SMG5-203ENST00000473643 MYH14Q7Z406 1995 aaKnown RBP11.78□□□□□ -0.52
SMG5-203ENST00000473643 KCNQ3O43525 872 aa11.77□□□□□ -0.53
SMG5-203ENST00000473643 EIF4A1P60842 406 aaKnown RBP11.77□□□□□ -0.53
SMG5-203ENST00000473643 FKBP8Q14318 412 aa11.77□□□□□ -0.53
SMG5-203ENST00000473643 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.53
SMG5-203ENST00000473643 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.53
SMG5-203ENST00000473643 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.53
SMG5-203ENST00000473643 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
SMG5-203ENST00000473643 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.53
SMG5-203ENST00000473643 CICQ96RK0 1608 aaPredicted RBP11.76□□□□□ -0.53
SMG5-203ENST00000473643 GRIN3BO60391 1043 aa11.76□□□□□ -0.53
SMG5-203ENST00000473643 CT47B1P0C2W7 299 aaPredicted RBP11.76□□□□□ -0.53
SMG5-203ENST00000473643 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMG5-203ENST00000473643 TM4SF1P30408 202 aa11.76□□□□□ -0.53
SMG5-203ENST00000473643 EIF5P55010 431 aaKnown RBP11.76□□□□□ -0.53
SMG5-203ENST00000473643 EXOSC9Q06265 439 aaKnown RBP11.76□□□□□ -0.53
SMG5-203ENST00000473643 ZPR1O75312 459 aa11.75□□□□□ -0.53
SMG5-203ENST00000473643 HOXB7P09629 217 aa11.75□□□□□ -0.53
SMG5-203ENST00000473643 TGFB2P61812 414 aa11.75□□□□□ -0.53
SMG5-203ENST00000473643 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
SMG5-203ENST00000473643 NARFQ9UHQ1 456 aa11.75□□□□□ -0.53
SMG5-203ENST00000473643 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
SMG5-203ENST00000473643 TJP1Q07157 1748 aa11.74□□□□□ -0.53
SMG5-203ENST00000473643 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
SMG5-203ENST00000473643 VAMP4O75379 141 aa11.74□□□□□ -0.53
SMG5-203ENST00000473643 CANXP27824 592 aaKnown RBP11.74□□□□□ -0.53
SMG5-203ENST00000473643 USPL1Q5W0Q7 1092 aa11.74□□□□□ -0.53
SMG5-203ENST00000473643 ZNF428Q96B54 188 aa11.74□□□□□ -0.53
SMG5-203ENST00000473643 BCL2L12Q9HB09 334 aa11.74□□□□□ -0.53
SMG5-203ENST00000473643 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
SMG5-203ENST00000473643 A1BGP04217 495 aa11.73□□□□□ -0.53
SMG5-203ENST00000473643 SNRPA1P09661 255 aaKnown RBP11.73□□□□□ -0.53
SMG5-203ENST00000473643 IL6STP40189 918 aaPredicted RBP11.73□□□□□ -0.53
SMG5-203ENST00000473643 DDR1Q08345 913 aa11.73□□□□□ -0.53
SMG5-203ENST00000473643 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
SMG5-203ENST00000473643 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
SMG5-203ENST00000473643 USP16Q9Y5T5 823 aa11.73□□□□□ -0.53
SMG5-203ENST00000473643 COL15A1P39059 1388 aa11.72□□□□□ -0.53
SMG5-203ENST00000473643 A0A087WZG4 1122 aa11.72□□□□□ -0.53
SMG5-203ENST00000473643 POLRMTO00411 1230 aaKnown RBP11.72□□□□□ -0.53
SMG5-203ENST00000473643 KRT24Q2M2I5 525 aa11.72□□□□□ -0.53
SMG5-203ENST00000473643 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
SMG5-203ENST00000473643 CHMP4AQ9BY43 222 aa11.72□□□□□ -0.53
SMG5-203ENST00000473643 PRAMEF22A3QJZ6 481 aa11.71□□□□□ -0.53
SMG5-203ENST00000473643 NFIXQ14938 502 aa11.71□□□□□ -0.53
SMG5-203ENST00000473643 KDM3BQ7LBC6 1761 aa11.71□□□□□ -0.54
SMG5-203ENST00000473643 UBR2Q8IWV8 1755 aa11.71□□□□□ -0.54
SMG5-203ENST00000473643 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
SMG5-203ENST00000473643 A0A0G2JLW4 131 aa11.7□□□□□ -0.54
SMG5-203ENST00000473643 ELL2O00472 640 aaPredicted RBP11.7□□□□□ -0.54
SMG5-203ENST00000473643 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
SMG5-203ENST00000473643 KCNA3P22001 575 aa11.7□□□□□ -0.54
SMG5-203ENST00000473643 ZNF784Q8NCA9 323 aaPredicted RBP11.7□□□□□ -0.54
SMG5-203ENST00000473643 DPEP1P16444 411 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms