RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 RFX1P22670 979 aa8.83□□□□□ -1
CNOT4-209ENST00000473470 EFHC2Q5JST6 749 aa8.83□□□□□ -1
CNOT4-209ENST00000473470 GAS2L2Q8NHY3 880 aa8.83□□□□□ -1
CNOT4-209ENST00000473470 NUCKS1Q9H1E3 243 aaKnown RBP8.83□□□□□ -1
CNOT4-209ENST00000473470 SFI1A8K8P3 1242 aa8.82□□□□□ -1
CNOT4-209ENST00000473470 TEAD4Q15561 434 aa8.82□□□□□ -1
CNOT4-209ENST00000473470 ZNF295-AS1Q8N0V1 137 aa8.82□□□□□ -1
CNOT4-209ENST00000473470 TSEN2Q8NCE0 465 aaKnown RBP8.82□□□□□ -1
CNOT4-209ENST00000473470 TRERF1Q96PN7 1200 aa8.82□□□□□ -1
CNOT4-209ENST00000473470 CRISPLD1Q9H336 500 aa8.82□□□□□ -1
CNOT4-209ENST00000473470 GPAMQ9HCL2 828 aa8.82□□□□□ -1
CNOT4-209ENST00000473470 ATG7O95352 703 aa8.81□□□□□ -1
CNOT4-209ENST00000473470 HIRAP54198 1017 aaPredicted RBP8.81□□□□□ -1
CNOT4-209ENST00000473470 INSM1Q01101 510 aaPredicted RBP8.81□□□□□ -1
CNOT4-209ENST00000473470 TNS4Q8IZW8 715 aa8.81□□□□□ -1
CNOT4-209ENST00000473470 FAM200AQ8TCP9 573 aa8.81□□□□□ -1
CNOT4-209ENST00000473470 NOVA2Q9UNW9 492 aaKnown RBP8.81□□□□□ -1
CNOT4-209ENST00000473470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.8□□□□□ -1
CNOT4-209ENST00000473470 SERTM1A2A2V5 107 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 ATP4AP20648 1035 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 MSX1P28360 303 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 GMPRP36959 345 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 SWI5Q1ZZU3 235 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 FIGNL1Q6PIW4 674 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 STAG2Q8N3U4 1231 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 ARXQ96QS3 562 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 TSPAN10Q9H1Z9 355 aaPredicted RBP8.8□□□□□ -1
CNOT4-209ENST00000473470 PHF24Q9UPV7 400 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 USP3Q9Y6I4 520 aa8.8□□□□□ -1
CNOT4-209ENST00000473470 PPP1R15AO75807 674 aaPredicted RBP8.79□□□□□ -1
CNOT4-209ENST00000473470 POTEAQ6S8J7 498 aa8.79□□□□□ -1
CNOT4-209ENST00000473470 VWA5B2Q8N398 1253 aa8.79□□□□□ -1
CNOT4-209ENST00000473470 ZNF232Q9UNY5 417 aa8.79□□□□□ -1
CNOT4-209ENST00000473470 ACIN1Q9UKV3 1341 aaKnown RBP8.79□□□□□ -1
CNOT4-209ENST00000473470 PPP1R12BO60237 982 aaPredicted RBP8.78□□□□□ -1
CNOT4-209ENST00000473470 IGFBP4P22692 258 aa8.78□□□□□ -1
CNOT4-209ENST00000473470 HIF1AQ16665 826 aa8.78□□□□□ -1
CNOT4-209ENST00000473470 LCE2CQ5TA81 110 aa8.78□□□□□ -1
CNOT4-209ENST00000473470 NLRP8Q86W28 1048 aa8.78□□□□□ -1
CNOT4-209ENST00000473470 L3MBTL2Q969R5 705 aa8.78□□□□□ -1
CNOT4-209ENST00000473470 AIDAQ96BJ3 306 aa8.78□□□□□ -1
CNOT4-209ENST00000473470 CUEDC1Q9NWM3 386 aaPredicted RBP8.78□□□□□ -1
CNOT4-209ENST00000473470 EML1O00423 815 aa8.77□□□□□ -1.01
CNOT4-209ENST00000473470 NOS2P35228 1153 aa8.77□□□□□ -1.01
CNOT4-209ENST00000473470 ZDHHC1Q8WTX9 485 aa8.77□□□□□ -1.01
CNOT4-209ENST00000473470 HINFPQ9BQA5 517 aa8.77□□□□□ -1.01
CNOT4-209ENST00000473470 RUBCNLQ9H714 662 aa8.77□□□□□ -1.01
CNOT4-209ENST00000473470 FOXO3O43524 673 aa8.76□□□□□ -1.01
CNOT4-209ENST00000473470 COL25A1Q9BXS0 654 aaPredicted RBP8.76□□□□□ -1.01
CNOT4-209ENST00000473470 C1orf115Q9H7X2 142 aa8.76□□□□□ -1.01
CNOT4-209ENST00000473470 ZMIZ1Q9ULJ6 1067 aa8.76□□□□□ -1.01
CNOT4-209ENST00000473470 NSFL1CQ9UNZ2 370 aaKnown RBP8.76□□□□□ -1.01
CNOT4-209ENST00000473470 GJA3Q9Y6H8 435 aa8.76□□□□□ -1.01
CNOT4-209ENST00000473470 SRPK2P78362 688 aaKnown RBP8.75□□□□□ -1.01
CNOT4-209ENST00000473470 DBN1Q16643 649 aa8.75□□□□□ -1.01
CNOT4-209ENST00000473470 ARSJQ5FYB0 599 aaPredicted RBP8.75□□□□□ -1.01
CNOT4-209ENST00000473470 TBCELQ5QJ74 424 aa8.75□□□□□ -1.01
CNOT4-209ENST00000473470 C1orf53Q5VUE5 145 aa8.75□□□□□ -1.01
CNOT4-209ENST00000473470 BICDL1Q6ZP65 573 aa8.75□□□□□ -1.01
CNOT4-209ENST00000473470 SCG3Q8WXD2 468 aaKnown RBP8.75□□□□□ -1.01
CNOT4-209ENST00000473470 GTPBP3Q969Y2 492 aaKnown RBP8.75□□□□□ -1.01
CNOT4-209ENST00000473470 ATXN7L1Q9ULK2 861 aaPredicted RBP8.75□□□□□ -1.01
CNOT4-209ENST00000473470 CDCA8Q53HL2 280 aa8.74□□□□□ -1.01
CNOT4-209ENST00000473470 SAMD5Q5TGI4 173 aa8.74□□□□□ -1.01
CNOT4-209ENST00000473470 RHPN1Q8TCX5 695 aa8.74□□□□□ -1.01
CNOT4-209ENST00000473470 CFHR5Q9BXR6 569 aa8.74□□□□□ -1.01
CNOT4-209ENST00000473470 MBIPQ9NS73 344 aa8.74□□□□□ -1.01
CNOT4-209ENST00000473470 VTI1AQ96AJ9 217 aa8.73□□□□□ -1.01
CNOT4-209ENST00000473470 C2orf49Q9BVC5 232 aaPredicted RBP8.73□□□□□ -1.01
CNOT4-209ENST00000473470 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
CNOT4-209ENST00000473470 A0A1W2PNR3 127 aa8.72□□□□□ -1.01
CNOT4-209ENST00000473470 C21orf2O43822 256 aa8.72□□□□□ -1.01
CNOT4-209ENST00000473470 FAM157BP0CG42 384 aa8.72□□□□□ -1.01
CNOT4-209ENST00000473470 TXLNAP40222 546 aa8.72□□□□□ -1.01
CNOT4-209ENST00000473470 STK32AQ8WU08 396 aa8.72□□□□□ -1.01
CNOT4-209ENST00000473470 PHACTR1Q9C0D0 580 aa8.72□□□□□ -1.01
CNOT4-209ENST00000473470 PARP3Q9Y6F1 533 aa8.72□□□□□ -1.01
CNOT4-209ENST00000473470 FAM181BA6NEQ2 426 aa8.71□□□□□ -1.02
CNOT4-209ENST00000473470 WEE1P30291 646 aa8.71□□□□□ -1.02
CNOT4-209ENST00000473470 SRSF11Q05519 484 aaKnown RBP8.71□□□□□ -1.02
CNOT4-209ENST00000473470 GPR161Q8N6U8 529 aaKnown RBP8.71□□□□□ -1.02
CNOT4-209ENST00000473470 CNTNAP3BQ96NU0 1288 aa8.71□□□□□ -1.02
CNOT4-209ENST00000473470 CNTNAP3Q9BZ76 1288 aa8.71□□□□□ -1.02
CNOT4-209ENST00000473470 NEUROD4Q9HD90 331 aa8.71□□□□□ -1.02
CNOT4-209ENST00000473470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.71□□□□□ -1.029e-8■■■■■ 98.4
CNOT4-209ENST00000473470 PCDHGC4Q9Y5F7 938 aa8.71□□□□□ -1.02
CNOT4-209ENST00000473470 GPR25O00155 361 aa8.7□□□□□ -1.02
CNOT4-209ENST00000473470 THBS1P07996 1170 aa8.7□□□□□ -1.02
CNOT4-209ENST00000473470 MX2P20592 715 aa8.7□□□□□ -1.02
CNOT4-209ENST00000473470 MAP2K3P46734 347 aa8.7□□□□□ -1.02
CNOT4-209ENST00000473470 GAS6Q14393 721 aa8.7□□□□□ -1.02
CNOT4-209ENST00000473470 RTN1Q16799 776 aa8.7□□□□□ -1.02
CNOT4-209ENST00000473470 TMEM164Q5U3C3 297 aa8.7□□□□□ -1.02
CNOT4-209ENST00000473470 CHMP7Q8WUX9 453 aaPredicted RBP8.7□□□□□ -1.02
CNOT4-209ENST00000473470 CLP1Q92989 425 aaKnown RBP8.7□□□□□ -1.02
CNOT4-209ENST00000473470 ZIC5Q96T25 663 aa8.7□□□□□ -1.02
CNOT4-209ENST00000473470 ANKIB1Q9P2G1 1089 aa8.7□□□□□ -1.02
CNOT4-209ENST00000473470 ATXN7O15265 892 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-209ENST00000473470 KRT76Q01546 638 aa8.69□□□□□ -1.02
CNOT4-209ENST00000473470 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms