RNA–Protein interactions for RNA: ENST00000473339.1

PTK7-211, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-211ENST00000473339 KIAA1551Q9HCM1 1747 aa21.55■■□□□ 1.04
PTK7-211ENST00000473339 MYBBP1AQ9BQG0 1328 aaKnown RBP21.55■■□□□ 1.04
PTK7-211ENST00000473339 COL15A1P39059 1388 aa21.54■■□□□ 1.04
PTK7-211ENST00000473339 USPL1Q5W0Q7 1092 aa21.54■■□□□ 1.04
PTK7-211ENST00000473339 FMNL2Q96PY5 1086 aa21.54■■□□□ 1.04
PTK7-211ENST00000473339 NARFQ9UHQ1 456 aa21.54■■□□□ 1.04
PTK7-211ENST00000473339 KIF13BQ9NQT8 1826 aa21.54■■□□□ 1.04
PTK7-211ENST00000473339 PXDNLA1KZ92 1463 aa21.53■■□□□ 1.04
PTK7-211ENST00000473339 RTF1Q92541 710 aaKnown RBP21.53■■□□□ 1.04
PTK7-211ENST00000473339 USP16Q9Y5T5 823 aa21.53■■□□□ 1.04
PTK7-211ENST00000473339 POLRMTO00411 1230 aaKnown RBP21.52■■□□□ 1.04
PTK7-211ENST00000473339 STARD3NLO95772 234 aa21.52■■□□□ 1.04
PTK7-211ENST00000473339 A1BGP04217 495 aa21.52■■□□□ 1.04
PTK7-211ENST00000473339 CANXP27824 592 aaKnown RBP21.52■■□□□ 1.04
PTK7-211ENST00000473339 NFE2L2Q16236 605 aa21.52■■□□□ 1.04
PTK7-211ENST00000473339 TEX13AQ9BXU3 409 aaPredicted RBP21.52■■□□□ 1.04
PTK7-211ENST00000473339 PRKRIP1Q9H875 184 aaPredicted RBP21.52■■□□□ 1.04
PTK7-211ENST00000473339 KCNA3P22001 575 aa21.51■■□□□ 1.03
PTK7-211ENST00000473339 TAF7Q15545 349 aaPredicted RBP21.51■■□□□ 1.03
PTK7-211ENST00000473339 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
PTK7-211ENST00000473339 MIS18AQ9NYP9 233 aa21.51■■□□□ 1.03
PTK7-211ENST00000473339 THUMPD2Q9BTF0 503 aaKnown RBP21.5■■□□□ 1.03
PTK7-211ENST00000473339 GRIN3BO60391 1043 aa21.49■■□□□ 1.03
PTK7-211ENST00000473339 TGFB2P61812 414 aa21.49■■□□□ 1.03
PTK7-211ENST00000473339 NFIXQ14938 502 aa21.49■■□□□ 1.03
PTK7-211ENST00000473339 ZNF784Q8NCA9 323 aaPredicted RBP21.49■■□□□ 1.03
PTK7-211ENST00000473339 PARP3Q9Y6F1 533 aa21.49■■□□□ 1.03
PTK7-211ENST00000473339 ZPR1O75312 459 aa21.48■■□□□ 1.03
PTK7-211ENST00000473339 IL6STP40189 918 aaPredicted RBP21.48■■□□□ 1.03
PTK7-211ENST00000473339 DLG5Q8TDM6 1919 aa21.48■■□□□ 1.03
PTK7-211ENST00000473339 A0A0G2JLW4 131 aa21.47■■□□□ 1.03
PTK7-211ENST00000473339 WWC3Q9ULE0 1092 aa21.47■■□□□ 1.03
PTK7-211ENST00000473339 NBPF26B4DH59 902 aa21.46■■□□□ 1.03
PTK7-211ENST00000473339 SNRPA1P09661 255 aaKnown RBP21.46■■□□□ 1.03
PTK7-211ENST00000473339 DPEP1P16444 411 aa21.46■■□□□ 1.03
PTK7-211ENST00000473339 ZEB1P37275 1124 aaPredicted RBP21.46■■□□□ 1.03
PTK7-211ENST00000473339 NBPF10Q6P3W6 841 aaKnown RBP21.46■■□□□ 1.03
PTK7-211ENST00000473339 NBPF15Q8N660 670 aa21.46■■□□□ 1.03
PTK7-211ENST00000473339 CHD4Q14839 1912 aa21.46■■□□□ 1.03
PTK7-211ENST00000473339 PIP4K2AP48426 406 aaPredicted RBP21.45■■□□□ 1.02
PTK7-211ENST00000473339 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
PTK7-211ENST00000473339 TBC1D2BQ9UPU7 963 aa21.44■■□□□ 1.02
PTK7-211ENST00000473339 NRXN2Q9P2S2 1712 aa21.43■■□□□ 1.02
PTK7-211ENST00000473339 CAMTA2O94983 1202 aa21.43■■□□□ 1.02
PTK7-211ENST00000473339 TMPOP42166 694 aaKnown RBP21.43■■□□□ 1.02
PTK7-211ENST00000473339 EIF4A1P60842 406 aaKnown RBP21.43■■□□□ 1.02
PTK7-211ENST00000473339 ADAMTS8Q9UP79 889 aa21.43■■□□□ 1.02
PTK7-211ENST00000473339 N4BP2Q86UW6 1770 aaPredicted RBP21.43■■□□□ 1.02
PTK7-211ENST00000473339 A0A087WZG4 1122 aa21.42■■□□□ 1.02
PTK7-211ENST00000473339 RIPK4P57078 832 aa21.42■■□□□ 1.02
PTK7-211ENST00000473339 TBC1D9BQ66K14 1250 aa21.42■■□□□ 1.02
PTK7-211ENST00000473339 KDM3BQ7LBC6 1761 aa21.42■■□□□ 1.02
PTK7-211ENST00000473339 MAPK8IP3Q9UPT6 1336 aa21.41■■□□□ 1.02
PTK7-211ENST00000473339 GIGYF1O75420 1035 aaPredicted RBP21.41■■□□□ 1.02
PTK7-211ENST00000473339 NEFMP07197 916 aa21.41■■□□□ 1.02
PTK7-211ENST00000473339 SERPINB2P05120 415 aa21.4■■□□□ 1.02
PTK7-211ENST00000473339 CCDC146Q8IYE0 955 aa21.4■■□□□ 1.02
PTK7-211ENST00000473339 PNISRQ8TF01 805 aaKnown RBP21.4■■□□□ 1.02
PTK7-211ENST00000473339 TRIM35Q9UPQ4 493 aa21.4■■□□□ 1.02
PTK7-211ENST00000473339 BRCA1P38398 1863 aaKnown RBP21.39■■□□□ 1.02
PTK7-211ENST00000473339 CARMIL3Q8ND23 1372 aa21.39■■□□□ 1.02
PTK7-211ENST00000473339 CHRNA5P30532 468 aa21.39■■□□□ 1.01
PTK7-211ENST00000473339 SCN7AQ01118 1682 aa21.39■■□□□ 1.01
PTK7-211ENST00000473339 AFDNP55196 1824 aaKnown RBP21.39■■□□□ 1.01
PTK7-211ENST00000473339 ADCY9O60503 1353 aa21.38■■□□□ 1.01
PTK7-211ENST00000473339 RRP7AQ9Y3A4 280 aaKnown RBP21.38■■□□□ 1.01
PTK7-211ENST00000473339 CCDC184Q52MB2 194 aa21.37■■□□□ 1.01
PTK7-211ENST00000473339 RUNDC1Q96C34 613 aa21.37■■□□□ 1.01
PTK7-211ENST00000473339 BICDL1Q6ZP65 573 aa21.36■■□□□ 1.01
PTK7-211ENST00000473339 DZIP3Q86Y13 1208 aaKnown RBP21.36■■□□□ 1.01
PTK7-211ENST00000473339 ZNF330Q9Y3S2 320 aaPredicted RBP21.36■■□□□ 1.01
PTK7-211ENST00000473339 BCS1LQ9Y276 419 aa21.35■■□□□ 1.01
PTK7-211ENST00000473339 LRP10Q7Z4F1 713 aa21.34■■□□□ 1.01
PTK7-211ENST00000473339 BABAM1Q9NWV8 329 aa21.34■■□□□ 1.01
PTK7-211ENST00000473339 PIM2Q9P1W9 311 aa21.34■■□□□ 1.01
PTK7-211ENST00000473339 PRR5LQ6MZQ0 368 aa21.33■■□□□ 1.01
PTK7-211ENST00000473339 BCORQ6W2J9 1755 aa21.33■■□□□ 1
PTK7-211ENST00000473339 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
PTK7-211ENST00000473339 CHL1O00533 1208 aa21.32■■□□□ 1
PTK7-211ENST00000473339 RGL2O15211 777 aa21.32■■□□□ 1
PTK7-211ENST00000473339 WDR43Q15061 677 aaKnown RBP eCLIP21.32■■□□□ 1
PTK7-211ENST00000473339 CLEC4GQ6UXB4 293 aa21.32■■□□□ 1
PTK7-211ENST00000473339 PDIA6Q15084 440 aa21.31■■□□□ 1
PTK7-211ENST00000473339 NEUROD2Q15784 382 aa21.31■■□□□ 1
PTK7-211ENST00000473339 HLFQ16534 295 aa21.31■■□□□ 1
PTK7-211ENST00000473339 CCDC24Q8N4L8 307 aa21.31■■□□□ 1
PTK7-211ENST00000473339 TSPYL4Q9UJ04 414 aa21.31■■□□□ 1
PTK7-211ENST00000473339 LAMB4A4D0S4 1761 aa21.31■■□□□ 1
PTK7-211ENST00000473339 ATP10DQ9P241 1426 aa21.3■■□□□ 1
PTK7-211ENST00000473339 DALRD3Q5D0E6 543 aaKnown RBP21.3■■□□□ 1
PTK7-211ENST00000473339 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
PTK7-211ENST00000473339 SETDB2Q96T68 719 aa21.29■■□□□ 1
PTK7-211ENST00000473339 ANKRD31Q8N7Z5 1873 aa21.28■■□□□ 1
PTK7-211ENST00000473339 TTLL7Q6ZT98 887 aa21.28■■□□□ 1
PTK7-211ENST00000473339 BRIP1Q9BX63 1249 aa21.28■■□□□ 1
PTK7-211ENST00000473339 KRT24Q2M2I5 525 aa21.27■■□□□ 1
PTK7-211ENST00000473339 ARFGEF1Q9Y6D6 1849 aa21.27■□□□□ 0.99
PTK7-211ENST00000473339 PROSER3Q2NL68 480 aa21.26■□□□□ 0.99
PTK7-211ENST00000473339 ARHGAP27Q6ZUM4 889 aa21.26■□□□□ 0.99
PTK7-211ENST00000473339 C2CD5Q86YS7 1000 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms