RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 WDR43Q15061 677 aaKnown RBP eCLIP20.62■□□□□ 0.89
MRPL55-226ENST00000473066 NFE2L2Q16236 605 aa20.62■□□□□ 0.89
MRPL55-226ENST00000473066 ZBTB1Q9Y2K1 713 aa20.62■□□□□ 0.89
MRPL55-226ENST00000473066 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
MRPL55-226ENST00000473066 KDM3BQ7LBC6 1761 aa20.62■□□□□ 0.89
MRPL55-226ENST00000473066 DCTN1Q14203 1278 aa20.61■□□□□ 0.89
MRPL55-226ENST00000473066 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
MRPL55-226ENST00000473066 PARP3Q9Y6F1 533 aa20.61■□□□□ 0.89
MRPL55-226ENST00000473066 SRP68Q9UHB9 627 aaKnown RBP20.6■□□□□ 0.89
MRPL55-226ENST00000473066 SCN7AQ01118 1682 aa20.59■□□□□ 0.89
MRPL55-226ENST00000473066 CANXP27824 592 aaKnown RBP20.59■□□□□ 0.89
MRPL55-226ENST00000473066 PLEKHF1Q96S99 279 aa20.59■□□□□ 0.89
MRPL55-226ENST00000473066 PRKRIP1Q9H875 184 aaPredicted RBP20.59■□□□□ 0.89
MRPL55-226ENST00000473066 N4BP2Q86UW6 1770 aaPredicted RBP20.59■□□□□ 0.89
MRPL55-226ENST00000473066 A0A087WZG4 1122 aa20.57■□□□□ 0.88
MRPL55-226ENST00000473066 TAF7Q15545 349 aaPredicted RBP20.57■□□□□ 0.88
MRPL55-226ENST00000473066 C10orf71Q711Q0 1435 aa20.57■□□□□ 0.88
MRPL55-226ENST00000473066 PNISRQ8TF01 805 aaKnown RBP20.57■□□□□ 0.88
MRPL55-226ENST00000473066 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
MRPL55-226ENST00000473066 AFDNP55196 1824 aaKnown RBP20.56■□□□□ 0.88
MRPL55-226ENST00000473066 KCNQ3O43525 872 aa20.56■□□□□ 0.88
MRPL55-226ENST00000473066 USPL1Q5W0Q7 1092 aa20.56■□□□□ 0.88
MRPL55-226ENST00000473066 NARFQ9UHQ1 456 aa20.56■□□□□ 0.88
MRPL55-226ENST00000473066 KIAA1551Q9HCM1 1747 aa20.56■□□□□ 0.88
MRPL55-226ENST00000473066 BCORQ6W2J9 1755 aa20.55■□□□□ 0.88
MRPL55-226ENST00000473066 GRIN3BO60391 1043 aa20.55■□□□□ 0.88
MRPL55-226ENST00000473066 LMOD3Q0VAK6 560 aa20.55■□□□□ 0.88
MRPL55-226ENST00000473066 FKBP8Q14318 412 aa20.55■□□□□ 0.88
MRPL55-226ENST00000473066 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
MRPL55-226ENST00000473066 IL6STP40189 918 aaPredicted RBP20.53■□□□□ 0.88
MRPL55-226ENST00000473066 BRCA1P38398 1863 aaKnown RBP20.52■□□□□ 0.88
MRPL55-226ENST00000473066 PXDNLA1KZ92 1463 aa20.52■□□□□ 0.88
MRPL55-226ENST00000473066 ZNF316A6NFI3 1004 aaPredicted RBP20.52■□□□□ 0.88
MRPL55-226ENST00000473066 EIF5P55010 431 aaKnown RBP20.52■□□□□ 0.88
MRPL55-226ENST00000473066 RIPK4P57078 832 aa20.52■□□□□ 0.88
MRPL55-226ENST00000473066 YBX3P16989 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
MRPL55-226ENST00000473066 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
MRPL55-226ENST00000473066 NRXN2Q9P2S2 1712 aa20.5■□□□□ 0.87
MRPL55-226ENST00000473066 A1BGP04217 495 aa20.5■□□□□ 0.87
MRPL55-226ENST00000473066 TGFB2P61812 414 aa20.5■□□□□ 0.87
MRPL55-226ENST00000473066 DDR1Q08345 913 aa20.5■□□□□ 0.87
MRPL55-226ENST00000473066 THUMPD2Q9BTF0 503 aaKnown RBP20.5■□□□□ 0.87
MRPL55-226ENST00000473066 WWC3Q9ULE0 1092 aa20.5■□□□□ 0.87
MRPL55-226ENST00000473066 TMPOP42166 694 aaKnown RBP20.49■□□□□ 0.87
MRPL55-226ENST00000473066 RUNDC1Q96C34 613 aa20.49■□□□□ 0.87
MRPL55-226ENST00000473066 MIS18AQ9NYP9 233 aa20.49■□□□□ 0.87
MRPL55-226ENST00000473066 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
MRPL55-226ENST00000473066 USP16Q9Y5T5 823 aa20.48■□□□□ 0.87
MRPL55-226ENST00000473066 ARFGEF1Q9Y6D6 1849 aa20.48■□□□□ 0.87
MRPL55-226ENST00000473066 TM4SF1P30408 202 aa20.47■□□□□ 0.87
MRPL55-226ENST00000473066 NFIXQ14938 502 aa20.47■□□□□ 0.87
MRPL55-226ENST00000473066 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
MRPL55-226ENST00000473066 TBC1D2BQ9UPU7 963 aa20.47■□□□□ 0.87
MRPL55-226ENST00000473066 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
MRPL55-226ENST00000473066 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
MRPL55-226ENST00000473066 TSPYL4Q9UJ04 414 aa20.46■□□□□ 0.87
MRPL55-226ENST00000473066 RRP7AQ9Y3A4 280 aaKnown RBP20.46■□□□□ 0.87
MRPL55-226ENST00000473066 DLEC1Q9Y238 1755 aa20.46■□□□□ 0.87
MRPL55-226ENST00000473066 BICDL1Q6ZP65 573 aa20.45■□□□□ 0.86
MRPL55-226ENST00000473066 BCL2L12Q9HB09 334 aa20.45■□□□□ 0.86
MRPL55-226ENST00000473066 ADAMTS8Q9UP79 889 aa20.45■□□□□ 0.86
MRPL55-226ENST00000473066 A0A0G2JLW4 131 aa20.44■□□□□ 0.86
MRPL55-226ENST00000473066 PIP4K2AP48426 406 aaPredicted RBP20.44■□□□□ 0.86
MRPL55-226ENST00000473066 ZNF652Q9Y2D9 606 aa20.44■□□□□ 0.86
MRPL55-226ENST00000473066 CARMIL3Q8ND23 1372 aa20.44■□□□□ 0.86
MRPL55-226ENST00000473066 NPHP1O15259 732 aa20.43■□□□□ 0.86
MRPL55-226ENST00000473066 SERPINB2P05120 415 aa20.43■□□□□ 0.86
MRPL55-226ENST00000473066 DPEP1P16444 411 aa20.43■□□□□ 0.86
MRPL55-226ENST00000473066 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
MRPL55-226ENST00000473066 BCS1LQ9Y276 419 aa20.43■□□□□ 0.86
MRPL55-226ENST00000473066 ANP32CO43423 234 aa20.42■□□□□ 0.86
MRPL55-226ENST00000473066 BABAM1Q9NWV8 329 aa20.42■□□□□ 0.86
MRPL55-226ENST00000473066 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
MRPL55-226ENST00000473066 CAMTA2O94983 1202 aa20.41■□□□□ 0.86
MRPL55-226ENST00000473066 TBC1D9BQ66K14 1250 aa20.41■□□□□ 0.86
MRPL55-226ENST00000473066 ANKRD31Q8N7Z5 1873 aa20.41■□□□□ 0.86
MRPL55-226ENST00000473066 NUP98P52948 1817 aa20.4■□□□□ 0.86
MRPL55-226ENST00000473066 PIM2Q9P1W9 311 aa20.4■□□□□ 0.86
MRPL55-226ENST00000473066 ZNF784Q8NCA9 323 aaPredicted RBP20.39■□□□□ 0.85
MRPL55-226ENST00000473066 SETDB2Q96T68 719 aa20.39■□□□□ 0.85
MRPL55-226ENST00000473066 ERBB4Q15303 1308 aa20.38■□□□□ 0.85
MRPL55-226ENST00000473066 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
MRPL55-226ENST00000473066 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
MRPL55-226ENST00000473066 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
MRPL55-226ENST00000473066 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
MRPL55-226ENST00000473066 CACNA1SQ13698 1873 aa20.38■□□□□ 0.85
MRPL55-226ENST00000473066 CHRNA5P30532 468 aa20.37■□□□□ 0.85
MRPL55-226ENST00000473066 DALRD3Q5D0E6 543 aaKnown RBP20.37■□□□□ 0.85
MRPL55-226ENST00000473066 CLEC4GQ6UXB4 293 aa20.37■□□□□ 0.85
MRPL55-226ENST00000473066 KIF6Q6ZMV9 814 aa20.37■□□□□ 0.85
MRPL55-226ENST00000473066 CNBD1Q8NA66 436 aa20.37■□□□□ 0.85
MRPL55-226ENST00000473066 COL11A2P13942 1736 aaPredicted RBP20.36■□□□□ 0.85
MRPL55-226ENST00000473066 RGL2O15211 777 aa20.36■□□□□ 0.85
MRPL55-226ENST00000473066 ST5P78524 1137 aa20.36■□□□□ 0.85
MRPL55-226ENST00000473066 NGEFQ8N5V2 710 aa20.36■□□□□ 0.85
MRPL55-226ENST00000473066 TRIM35Q9UPQ4 493 aa20.36■□□□□ 0.85
MRPL55-226ENST00000473066 MYL6BP14649 208 aa20.35■□□□□ 0.85
MRPL55-226ENST00000473066 CALD1Q05682 793 aaKnown RBP20.35■□□□□ 0.85
MRPL55-226ENST00000473066 APAF1O14727 1248 aa20.34■□□□□ 0.85
MRPL55-226ENST00000473066 PRR5LQ6MZQ0 368 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms