RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 LMTK2Q8IWU2 1503 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 UNC13BO14795 1591 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 SIGLEC1Q9BZZ2 1709 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 DKK1O94907 266 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 TSPY4P0CV99 314 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 TSPY10P0CW01 314 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 IBSPP21815 317 aaPredicted RBP5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 GNL2Q13823 731 aaKnown RBP5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 SLFNL1Q499Z3 407 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 IER5LQ5T953 404 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 SOGA3Q5TF21 947 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 ZNF746Q6NUN9 644 aaPredicted RBP5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 ZNF454Q8N9F8 522 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 PLPP7Q8NBV4 271 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 TATDN2Q93075 761 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 DNAAF2Q9NVR5 837 aaKnown RBP5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 BCCIPQ9P287 314 aaKnown RBP eCLIP5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 CHIC2Q9UKJ5 165 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 DHX29Q7Z478 1369 aaKnown RBP5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 ANKRD30AQ9BXX3 1397 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 A2MP01023 1474 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 PTPRMP28827 1452 aa5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 RPRD2Q5VT52 1461 aaKnown RBP5.62□□□□□ -1.51
UBE2D4-210ENST00000473007 HFM1A2PYH4 1435 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 ZBTB7BO15156 539 aaPredicted RBP5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 SPAG9O60271 1321 aaKnown RBP5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 PARNO95453 639 aaKnown RBP5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 DNAJA1P31689 397 aaKnown RBP5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 TNNI2P48788 182 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 XPCQ01831 940 aaPredicted RBP5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 EML3Q32P44 896 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 GORABQ5T7V8 394 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 PPP1R18Q6NYC8 613 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 IQGAP3Q86VI3 1631 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 TRIM50Q86XT4 487 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 FAM161BQ96MY7 647 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 RBCK1Q9BYM8 510 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 PARP2Q9UGN5 583 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 PNMA3Q9UL41 463 aa5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 NOP58Q9Y2X3 529 aaKnown RBP5.61□□□□□ -1.51
UBE2D4-210ENST00000473007 TET3O43151 1660 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 ZNF142P52746 1687 aaPredicted RBP5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 MROH1Q8NDA8 1641 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 NPATQ14207 1427 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 ARHGAP31Q2M1Z3 1444 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 ATP1A2P50993 1020 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 ATN1P54259 1190 aaPredicted RBP5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 ANAPC15P60006 121 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 FMR1Q06787 632 aaKnown RBP eCLIP5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 MTMR3Q13615 1198 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 TMC7Q7Z402 723 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 TMC4Q7Z404 712 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 JAZF1Q86VZ6 243 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 EXOC8Q8IYI6 725 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 SIX5Q8N196 739 aa5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 SYMPKQ92797 1274 aaKnown RBP5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.6□□□□□ -1.51
UBE2D4-210ENST00000473007 PREX1Q8TCU6 1659 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 NEURL4Q96JN8 1562 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 YEATS2Q9ULM3 1422 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 NBPF26B4DH59 902 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 TREHO43280 583 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 SORBS3O60504 671 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 PRPF40AO75400 957 aaKnown RBP5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 RAPGEF3O95398 923 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 MAP4K4O95819 1239 aaPredicted RBP5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 LDHBP07195 334 aaKnown RBP5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 SLC10A3P09131 477 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 PLCG2P16885 1265 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 COL9A1P20849 921 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 HSD3B2P26439 372 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 ZNF76P36508 570 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 ITGAEP38570 1179 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 SEC13P55735 322 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 FGD1P98174 961 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 ARID5AQ03989 594 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 MAP7D1Q3KQU3 841 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 TRAF7Q6Q0C0 670 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 AFAP1Q8N556 730 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 ZCRB1Q8TBF4 217 aaKnown RBP5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 DUSP9Q99956 384 aaKnown RBP5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 OSBPL2Q9H1P3 480 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 MRS2Q9HD23 443 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 RNF19AQ9NV58 838 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 FKBPLQ9UIM3 349 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 KIAA1024Q9UPX6 916 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 NOD1Q9Y239 953 aa5.59□□□□□ -1.51
UBE2D4-210ENST00000473007 C3P01024 1663 aa5.59□□□□□ -1.52
UBE2D4-210ENST00000473007 CAMSAP1Q5T5Y3 1602 aa5.59□□□□□ -1.52
UBE2D4-210ENST00000473007 ANKRD50Q9ULJ7 1429 aa5.58□□□□□ -1.52
UBE2D4-210ENST00000473007 DAB2P98082 770 aa5.58□□□□□ -1.52
UBE2D4-210ENST00000473007 CAPN12Q6ZSI9 719 aa5.58□□□□□ -1.52
UBE2D4-210ENST00000473007 DMGDHQ9UI17 866 aaKnown RBP5.58□□□□□ -1.52
UBE2D4-210ENST00000473007 MADDQ8WXG6 1647 aa5.58□□□□□ -1.52
UBE2D4-210ENST00000473007 KIF15Q9NS87 1388 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 ZNF644Q9H582 1327 aaPredicted RBP5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 NPR3P17342 541 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 HNRNPMP52272 730 aaKnown RBP eCLIP5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 MCCD1P59942 119 aaPredicted RBP5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 DSC3Q14574 896 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms