RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 BCL2L12Q9HB09 334 aa8.75□□□□□ -1.01
CFHR1-204ENST00000472961 PARP3Q9Y6F1 533 aa8.75□□□□□ -1.01
CFHR1-204ENST00000472961 CNTNAP1P78357 1384 aa8.74□□□□□ -1.01
CFHR1-204ENST00000472961 VEGFAP15692 232 aaPredicted RBP8.74□□□□□ -1.01
CFHR1-204ENST00000472961 ADRA2BP18089 450 aa8.74□□□□□ -1.01
CFHR1-204ENST00000472961 CRKLP46109 303 aaKnown RBP8.74□□□□□ -1.01
CFHR1-204ENST00000472961 PASKQ96RG2 1323 aa8.74□□□□□ -1.01
CFHR1-204ENST00000472961 ZC3H4Q9UPT8 1303 aaKnown RBP8.74□□□□□ -1.01
CFHR1-204ENST00000472961 COL4A5P29400 1685 aa8.73□□□□□ -1.01
CFHR1-204ENST00000472961 LMNB1P20700 586 aa8.73□□□□□ -1.01
CFHR1-204ENST00000472961 RFC4P35249 363 aa8.73□□□□□ -1.01
CFHR1-204ENST00000472961 RBM42Q9BTD8 480 aaKnown RBP8.73□□□□□ -1.01
CFHR1-204ENST00000472961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.73□□□□□ -1.01
CFHR1-204ENST00000472961 MKI67P46013 3256 aaKnown RBP8.73□□□□□ -1.01
CFHR1-204ENST00000472961 WASHC2AQ641Q2 1341 aa8.73□□□□□ -1.01
CFHR1-204ENST00000472961 MRC1P22897 1456 aa8.72□□□□□ -1.01
CFHR1-204ENST00000472961 VEGFBP49765 207 aa8.72□□□□□ -1.01
CFHR1-204ENST00000472961 IFNL2Q8IZJ0 200 aa8.72□□□□□ -1.01
CFHR1-204ENST00000472961 PRDM10Q9NQV6 1147 aa8.72□□□□□ -1.01
CFHR1-204ENST00000472961 CREBZFQ9NS37 354 aa8.72□□□□□ -1.01
CFHR1-204ENST00000472961 SPG7Q9UQ90 795 aa8.72□□□□□ -1.01
CFHR1-204ENST00000472961 HSPA8P11142 646 aaKnown RBP8.71□□□□□ -1.02
CFHR1-204ENST00000472961 LBX1P52954 281 aa8.71□□□□□ -1.02
CFHR1-204ENST00000472961 EIF4A2Q14240 407 aaKnown RBP8.71□□□□□ -1.02
CFHR1-204ENST00000472961 NFIXQ14938 502 aa8.71□□□□□ -1.02
CFHR1-204ENST00000472961 USPL1Q5W0Q7 1092 aa8.71□□□□□ -1.02
CFHR1-204ENST00000472961 ABHD8Q96I13 439 aa8.71□□□□□ -1.02
CFHR1-204ENST00000472961 POLKQ9UBT6 870 aa8.71□□□□□ -1.02
CFHR1-204ENST00000472961 SOS1Q07889 1333 aaPredicted RBP8.71□□□□□ -1.02
CFHR1-204ENST00000472961 PDE4DIPQ5VU43 2346 aa8.71□□□□□ -1.02
CFHR1-204ENST00000472961 ERVV-2B6SEH9 535 aa8.7□□□□□ -1.02
CFHR1-204ENST00000472961 PTCD1O75127 700 aaKnown RBP8.7□□□□□ -1.02
CFHR1-204ENST00000472961 ITGBL1O95965 494 aaPredicted RBP8.7□□□□□ -1.02
CFHR1-204ENST00000472961 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
CFHR1-204ENST00000472961 CENPFP49454 3210 aa8.69□□□□□ -1.02
CFHR1-204ENST00000472961 DDNO94850 711 aaPredicted RBP8.69□□□□□ -1.02
CFHR1-204ENST00000472961 HMGB2P26583 209 aaKnown RBP8.69□□□□□ -1.02
CFHR1-204ENST00000472961 CHADLQ6NUI6 762 aa8.69□□□□□ -1.02
CFHR1-204ENST00000472961 AEBP1Q8IUX7 1158 aa8.69□□□□□ -1.02
CFHR1-204ENST00000472961 CCDC24Q8N4L8 307 aa8.69□□□□□ -1.02
CFHR1-204ENST00000472961 BRCA2P51587 3418 aa8.68□□□□□ -1.02
CFHR1-204ENST00000472961 PPM1GO15355 546 aaPredicted RBP8.68□□□□□ -1.02
CFHR1-204ENST00000472961 RGS19P49795 217 aa8.68□□□□□ -1.02
CFHR1-204ENST00000472961 FMR1Q06787 632 aaKnown RBP eCLIP8.68□□□□□ -1.02
CFHR1-204ENST00000472961 DNAJC10Q8IXB1 793 aa8.68□□□□□ -1.02
CFHR1-204ENST00000472961 NFATC2IPQ8NCF5 419 aa8.68□□□□□ -1.02
CFHR1-204ENST00000472961 COL15A1P39059 1388 aa8.68□□□□□ -1.02
CFHR1-204ENST00000472961 HTTP42858 3142 aa8.68□□□□□ -1.02
CFHR1-204ENST00000472961 POLR2AP24928 1970 aaKnown RBP8.68□□□□□ -1.02
CFHR1-204ENST00000472961 SERPINB2P05120 415 aa8.67□□□□□ -1.02
CFHR1-204ENST00000472961 CTCFP49711 727 aaPredicted RBP8.67□□□□□ -1.02
CFHR1-204ENST00000472961 TTLL6Q8N841 843 aa8.67□□□□□ -1.02
CFHR1-204ENST00000472961 SNED1Q8TER0 1413 aa8.67□□□□□ -1.02
CFHR1-204ENST00000472961 ZBTB1Q9Y2K1 713 aa8.67□□□□□ -1.02
CFHR1-204ENST00000472961 ZNF541Q9H0D2 1346 aa8.66□□□□□ -1.02
CFHR1-204ENST00000472961 C21orf2O43822 256 aa8.66□□□□□ -1.02
CFHR1-204ENST00000472961 CYP19A1P11511 503 aaPredicted RBP8.66□□□□□ -1.02
CFHR1-204ENST00000472961 SLC51AQ86UW1 340 aa8.66□□□□□ -1.02
CFHR1-204ENST00000472961 C2CD5Q86YS7 1000 aa8.66□□□□□ -1.02
CFHR1-204ENST00000472961 ZNF219Q9P2Y4 722 aaPredicted RBP8.66□□□□□ -1.02
CFHR1-204ENST00000472961 CABP4P57796 275 aa8.65□□□□□ -1.02
CFHR1-204ENST00000472961 ERFEQ4G0M1 354 aa8.65□□□□□ -1.02
CFHR1-204ENST00000472961 ZNF530Q6P9A1 599 aaPredicted RBP8.65□□□□□ -1.02
CFHR1-204ENST00000472961 OLFM4Q6UX06 510 aa8.65□□□□□ -1.02
CFHR1-204ENST00000472961 TAF1DQ9H5J8 278 aaPredicted RBP8.65□□□□□ -1.02
CFHR1-204ENST00000472961 NARFQ9UHQ1 456 aa8.65□□□□□ -1.02
CFHR1-204ENST00000472961 NUP98P52948 1817 aa8.65□□□□□ -1.02
CFHR1-204ENST00000472961 LAMB2P55268 1798 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 LTBP3Q9NS15 1303 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 RASSF10A6NK89 507 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 SLC39A6Q13433 755 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 TBC1D9BQ66K14 1250 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 LGR6Q9HBX8 967 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 PCDH10Q9P2E7 1040 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 TSKSQ9UJT2 592 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 SZT2Q5T011 3432 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 TAF1P21675 1872 aa8.64□□□□□ -1.03
CFHR1-204ENST00000472961 TMEM88BA6NKF7 163 aa8.63□□□□□ -1.03
CFHR1-204ENST00000472961 PRR5LQ6MZQ0 368 aa8.63□□□□□ -1.03
CFHR1-204ENST00000472961 L3MBTL3Q96JM7 780 aaPredicted RBP8.63□□□□□ -1.03
CFHR1-204ENST00000472961 WDR33Q9C0J8 1336 aaKnown RBP8.62□□□□□ -1.03
CFHR1-204ENST00000472961 TNNT2P45379 298 aaPredicted RBP8.62□□□□□ -1.03
CFHR1-204ENST00000472961 MLLT1Q03111 559 aaPredicted RBP8.62□□□□□ -1.03
CFHR1-204ENST00000472961 MAP1SQ66K74 1059 aaPredicted RBP8.62□□□□□ -1.03
CFHR1-204ENST00000472961 BICDL1Q6ZP65 573 aa8.62□□□□□ -1.03
CFHR1-204ENST00000472961 LDHDQ86WU2 507 aa8.62□□□□□ -1.03
CFHR1-204ENST00000472961 C7orf43Q8WVR3 580 aa8.62□□□□□ -1.03
CFHR1-204ENST00000472961 AKAP11Q9UKA4 1901 aa8.62□□□□□ -1.03
CFHR1-204ENST00000472961 CCDC85CA6NKD9 419 aa8.61□□□□□ -1.03
CFHR1-204ENST00000472961 H0YIN7 160 aa8.61□□□□□ -1.03
CFHR1-204ENST00000472961 ZPR1O75312 459 aa8.61□□□□□ -1.03
CFHR1-204ENST00000472961 MTHFSP49914 203 aa8.61□□□□□ -1.03
CFHR1-204ENST00000472961 RNF123Q5XPI4 1314 aa8.6□□□□□ -1.03
CFHR1-204ENST00000472961 HSP90AB1P08238 724 aaKnown RBP8.6□□□□□ -1.03
CFHR1-204ENST00000472961 EIF5P55010 431 aaKnown RBP8.6□□□□□ -1.03
CFHR1-204ENST00000472961 DPY19L2Q6NUT2 758 aa8.6□□□□□ -1.03
CFHR1-204ENST00000472961 PRPF40BQ6NWY9 871 aaKnown RBP8.6□□□□□ -1.03
CFHR1-204ENST00000472961 ZNF622Q969S3 477 aaKnown RBP eCLIP8.6□□□□□ -1.03
CFHR1-204ENST00000472961 TAOK3Q9H2K8 898 aa8.6□□□□□ -1.03
CFHR1-204ENST00000472961 SLC52A2Q9HAB3 445 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms