RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 ZNF831Q5JPB2 1677 aa22.64■■□□□ 1.21
PKD1-208ENST00000472577 PXDNLA1KZ92 1463 aa22.63■■□□□ 1.21
PKD1-208ENST00000472577 TRIM35Q9UPQ4 493 aa22.63■■□□□ 1.21
PKD1-208ENST00000472577 N4BP2Q86UW6 1770 aaPredicted RBP22.62■■□□□ 1.21
PKD1-208ENST00000472577 MMP10P09238 476 aa22.61■■□□□ 1.21
PKD1-208ENST00000472577 C4AP0C0L4 1744 aa22.61■■□□□ 1.21
PKD1-208ENST00000472577 LMOD3Q0VAK6 560 aa22.61■■□□□ 1.21
PKD1-208ENST00000472577 RBM42Q9BTD8 480 aaKnown RBP22.61■■□□□ 1.21
PKD1-208ENST00000472577 GPBP1L1Q9HC44 474 aaPredicted RBP22.61■■□□□ 1.21
PKD1-208ENST00000472577 KCPQ6ZWJ8 1503 aa22.61■■□□□ 1.21
PKD1-208ENST00000472577 UBR2Q8IWV8 1755 aa22.61■■□□□ 1.21
PKD1-208ENST00000472577 PTCD1O75127 700 aaKnown RBP22.6■■□□□ 1.21
PKD1-208ENST00000472577 BTBD11A6QL63 1104 aa22.59■■□□□ 1.21
PKD1-208ENST00000472577 C10orf71Q711Q0 1435 aa22.58■■□□□ 1.21
PKD1-208ENST00000472577 KCNQ3O43525 872 aa22.58■■□□□ 1.21
PKD1-208ENST00000472577 TAF7Q15545 349 aaPredicted RBP22.58■■□□□ 1.21
PKD1-208ENST00000472577 ZNF790Q6PG37 636 aa22.58■■□□□ 1.21
PKD1-208ENST00000472577 MIS18AQ9NYP9 233 aa22.57■■□□□ 1.2
PKD1-208ENST00000472577 MYH14Q7Z406 1995 aaKnown RBP22.56■■□□□ 1.2
PKD1-208ENST00000472577 TTC5Q8N0Z6 440 aa22.56■■□□□ 1.2
PKD1-208ENST00000472577 TJP1Q07157 1748 aa22.56■■□□□ 1.2
PKD1-208ENST00000472577 RTCBQ9Y3I0 505 aaKnown RBP22.55■■□□□ 1.2
PKD1-208ENST00000472577 KDM3BQ7LBC6 1761 aa22.55■■□□□ 1.2
PKD1-208ENST00000472577 BRCA1P38398 1863 aaKnown RBP22.54■■□□□ 1.2
PKD1-208ENST00000472577 ZNF496Q96IT1 587 aaPredicted RBP22.54■■□□□ 1.2
PKD1-208ENST00000472577 CNTNAP4Q9C0A0 1308 aa22.54■■□□□ 1.2
PKD1-208ENST00000472577 ARHGEF1Q92888 912 aaKnown RBP22.53■■□□□ 1.2
PKD1-208ENST00000472577 GYS1P13807 737 aa22.52■■□□□ 1.2
PKD1-208ENST00000472577 TRAPPC3LQ5T215 181 aa22.52■■□□□ 1.2
PKD1-208ENST00000472577 A0A0G2JLW4 131 aa22.51■■□□□ 1.19
PKD1-208ENST00000472577 KIF3CO14782 793 aa22.51■■□□□ 1.19
PKD1-208ENST00000472577 CCDC27Q2M243 656 aa22.51■■□□□ 1.19
PKD1-208ENST00000472577 DNAJC10Q8IXB1 793 aa22.51■■□□□ 1.19
PKD1-208ENST00000472577 HEG1Q9ULI3 1381 aa22.5■■□□□ 1.19
PKD1-208ENST00000472577 HSPA6P17066 643 aa22.5■■□□□ 1.19
PKD1-208ENST00000472577 NCBP3Q53F19 620 aaKnown RBP22.5■■□□□ 1.19
PKD1-208ENST00000472577 RC3H1Q5TC82 1133 aaKnown RBP22.5■■□□□ 1.19
PKD1-208ENST00000472577 VSIG10Q8N0Z9 540 aa22.5■■□□□ 1.19
PKD1-208ENST00000472577 FMNL2Q96PY5 1086 aa22.5■■□□□ 1.19
PKD1-208ENST00000472577 SALL2Q9Y467 1007 aaPredicted RBP22.5■■□□□ 1.19
PKD1-208ENST00000472577 RPS6KA4O75676 772 aa22.49■■□□□ 1.19
PKD1-208ENST00000472577 ADRA2BP18089 450 aa22.49■■□□□ 1.19
PKD1-208ENST00000472577 WWC1Q8IX03 1113 aa22.49■■□□□ 1.19
PKD1-208ENST00000472577 NLGN1Q8N2Q7 840 aa22.49■■□□□ 1.19
PKD1-208ENST00000472577 TSPYL4Q9UJ04 414 aa22.49■■□□□ 1.19
PKD1-208ENST00000472577 BCS1LQ9Y276 419 aa22.49■■□□□ 1.19
PKD1-208ENST00000472577 CHL1O00533 1208 aa22.47■■□□□ 1.19
PKD1-208ENST00000472577 DPEP1P16444 411 aa22.47■■□□□ 1.19
PKD1-208ENST00000472577 TGFB2P61812 414 aa22.47■■□□□ 1.19
PKD1-208ENST00000472577 BABAM1Q9NWV8 329 aa22.47■■□□□ 1.19
PKD1-208ENST00000472577 LAS1LQ9Y4W2 734 aaKnown RBP22.47■■□□□ 1.19
PKD1-208ENST00000472577 RFC4P35249 363 aa22.46■■□□□ 1.19
PKD1-208ENST00000472577 EIF4A1P60842 406 aaKnown RBP22.46■■□□□ 1.19
PKD1-208ENST00000472577 SRP68Q9UHB9 627 aaKnown RBP22.46■■□□□ 1.19
PKD1-208ENST00000472577 PRAMEF22A3QJZ6 481 aa22.45■■□□□ 1.18
PKD1-208ENST00000472577 ZNF853P0CG23 659 aa22.45■■□□□ 1.18
PKD1-208ENST00000472577 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
PKD1-208ENST00000472577 CRKLP46109 303 aaKnown RBP22.45■■□□□ 1.18
PKD1-208ENST00000472577 CFAP44Q96MT7 982 aa22.45■■□□□ 1.18
PKD1-208ENST00000472577 CCDC87Q9NVE4 849 aa22.45■■□□□ 1.18
PKD1-208ENST00000472577 CALD1Q05682 793 aaKnown RBP22.44■■□□□ 1.18
PKD1-208ENST00000472577 ARFGEF1Q9Y6D6 1849 aa22.44■■□□□ 1.18
PKD1-208ENST00000472577 USP42Q9H9J4 1324 aaKnown RBP22.43■■□□□ 1.18
PKD1-208ENST00000472577 KCNA3P22001 575 aa22.43■■□□□ 1.18
PKD1-208ENST00000472577 INTS5Q6P9B9 1019 aaKnown RBP22.43■■□□□ 1.18
PKD1-208ENST00000472577 IFT57Q9NWB7 429 aa22.43■■□□□ 1.18
PKD1-208ENST00000472577 PARP3Q9Y6F1 533 aa22.43■■□□□ 1.18
PKD1-208ENST00000472577 SNRPA1P09661 255 aaKnown RBP22.42■■□□□ 1.18
PKD1-208ENST00000472577 DDR1Q08345 913 aa22.42■■□□□ 1.18
PKD1-208ENST00000472577 FKBP8Q14318 412 aa22.42■■□□□ 1.18
PKD1-208ENST00000472577 IFFO2Q5TF58 517 aa22.42■■□□□ 1.18
PKD1-208ENST00000472577 NGEFQ8N5V2 710 aa22.42■■□□□ 1.18
PKD1-208ENST00000472577 MBIPQ9NS73 344 aa22.42■■□□□ 1.18
PKD1-208ENST00000472577 USP16Q9Y5T5 823 aa22.42■■□□□ 1.18
PKD1-208ENST00000472577 GNAI1P63096 354 aa22.41■■□□□ 1.18
PKD1-208ENST00000472577 ARHGAP27Q6ZUM4 889 aa22.41■■□□□ 1.18
PKD1-208ENST00000472577 TEX13AQ9BXU3 409 aaPredicted RBP22.41■■□□□ 1.18
PKD1-208ENST00000472577 LAMB4A4D0S4 1761 aa22.4■■□□□ 1.18
PKD1-208ENST00000472577 STARD3NLO95772 234 aa22.39■■□□□ 1.17
PKD1-208ENST00000472577 KRT24Q2M2I5 525 aa22.39■■□□□ 1.17
PKD1-208ENST00000472577 WDR63Q8IWG1 891 aa22.39■■□□□ 1.17
PKD1-208ENST00000472577 NMRK2Q9NPI5 230 aa22.39■■□□□ 1.17
PKD1-208ENST00000472577 ZBTB1Q9Y2K1 713 aa22.39■■□□□ 1.17
PKD1-208ENST00000472577 IL16Q14005 1332 aa22.38■■□□□ 1.17
PKD1-208ENST00000472577 ZNF521Q96K83 1311 aa22.38■■□□□ 1.17
PKD1-208ENST00000472577 A1BGP04217 495 aa22.37■■□□□ 1.17
PKD1-208ENST00000472577 TSR2Q969E8 191 aaKnown RBP22.36■■□□□ 1.17
PKD1-208ENST00000472577 SOS1Q07889 1333 aaPredicted RBP22.35■■□□□ 1.17
PKD1-208ENST00000472577 CANXP27824 592 aaKnown RBP22.35■■□□□ 1.17
PKD1-208ENST00000472577 CHRNA5P30532 468 aa22.35■■□□□ 1.17
PKD1-208ENST00000472577 C9orf131Q5VYM1 1079 aa22.35■■□□□ 1.17
PKD1-208ENST00000472577 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
PKD1-208ENST00000472577 POLRMTO00411 1230 aaKnown RBP22.34■■□□□ 1.17
PKD1-208ENST00000472577 AFDNP55196 1824 aaKnown RBP22.34■■□□□ 1.17
PKD1-208ENST00000472577 TOMM70O94826 608 aa22.33■■□□□ 1.17
PKD1-208ENST00000472577 PIP4K2AP48426 406 aaPredicted RBP22.33■■□□□ 1.17
PKD1-208ENST00000472577 PIM2Q9P1W9 311 aa22.33■■□□□ 1.17
PKD1-208ENST00000472577 NRXN2Q9P2S2 1712 aa22.32■■□□□ 1.16
PKD1-208ENST00000472577 USPL1Q5W0Q7 1092 aa22.32■■□□□ 1.16
PKD1-208ENST00000472577 FANCIQ9NVI1 1328 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms