RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 MSX1P28360 303 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 DPYDQ12882 1025 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 TRIM22Q8IYM9 498 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 ZNF837Q96EG3 531 aaPredicted RBP9.46□□□□□ -0.9
CLTC-204ENST00000472129 CABP1Q9NZU7 370 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 ADAMTS8Q9UP79 889 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.45□□□□□ -0.9
CLTC-204ENST00000472129 LGR5O75473 907 aa9.45□□□□□ -0.9
CLTC-204ENST00000472129 THBS1P07996 1170 aa9.45□□□□□ -0.9
CLTC-204ENST00000472129 SUZ12Q15022 739 aaKnown RBP9.45□□□□□ -0.9
CLTC-204ENST00000472129 SLC9A9Q8IVB4 645 aa9.45□□□□□ -0.9
CLTC-204ENST00000472129 AIDAQ96BJ3 306 aa9.45□□□□□ -0.9
CLTC-204ENST00000472129 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
CLTC-204ENST00000472129 SEC13P55735 322 aa9.44□□□□□ -0.9
CLTC-204ENST00000472129 SRPK2P78362 688 aaKnown RBP9.44□□□□□ -0.9
CLTC-204ENST00000472129 RASSF7Q02833 373 aa9.44□□□□□ -0.9
CLTC-204ENST00000472129 ZNF385CQ66K41 422 aaPredicted RBP9.44□□□□□ -0.9
CLTC-204ENST00000472129 ANKMY2Q8IV38 441 aa9.44□□□□□ -0.9
CLTC-204ENST00000472129 ZDHHC1Q8WTX9 485 aa9.44□□□□□ -0.9
CLTC-204ENST00000472129 CCDC97Q96F63 343 aaPredicted RBP9.44□□□□□ -0.9
CLTC-204ENST00000472129 ARXQ96QS3 562 aa9.44□□□□□ -0.9
CLTC-204ENST00000472129 TSPAN10Q9H1Z9 355 aaPredicted RBP9.44□□□□□ -0.9
CLTC-204ENST00000472129 RUBCNLQ9H714 662 aa9.44□□□□□ -0.9
CLTC-204ENST00000472129 RBM19Q9Y4C8 960 aaKnown RBP9.44□□□□□ -0.9
CLTC-204ENST00000472129 GPR25O00155 361 aa9.43□□□□□ -0.9
CLTC-204ENST00000472129 TMEM151AQ8N4L1 468 aa9.43□□□□□ -0.9
CLTC-204ENST00000472129 GTPBP3Q969Y2 492 aaKnown RBP9.43□□□□□ -0.9
CLTC-204ENST00000472129 SERPINA10Q9UK55 444 aa9.43□□□□□ -0.9
CLTC-204ENST00000472129 M0R2N6 131 aa9.42□□□□□ -0.9
CLTC-204ENST00000472129 GDF11O95390 407 aa9.42□□□□□ -0.9
CLTC-204ENST00000472129 SH3PXD2AQ5TCZ1 1133 aa9.42□□□□□ -0.9
CLTC-204ENST00000472129 CCDC82Q8N4S0 544 aa9.42□□□□□ -0.9
CLTC-204ENST00000472129 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
CLTC-204ENST00000472129 WHAMMQ8TF30 809 aa9.42□□□□□ -0.9
CLTC-204ENST00000472129 L3MBTL2Q969R5 705 aa9.42□□□□□ -0.9
CLTC-204ENST00000472129 NUCKS1Q9H1E3 243 aaKnown RBP9.42□□□□□ -0.9
CLTC-204ENST00000472129 TIMELESSQ9UNS1 1208 aa9.42□□□□□ -0.9
CLTC-204ENST00000472129 H7C1W4 665 aa9.41□□□□□ -0.9
CLTC-204ENST00000472129 ATP4AP20648 1035 aa9.41□□□□□ -0.9
CLTC-204ENST00000472129 C21orf2O43822 256 aa9.4□□□□□ -0.9
CLTC-204ENST00000472129 NOS2P35228 1153 aa9.4□□□□□ -0.9
CLTC-204ENST00000472129 TXLNAP40222 546 aa9.4□□□□□ -0.9
CLTC-204ENST00000472129 TEAD4Q15561 434 aa9.4□□□□□ -0.9
CLTC-204ENST00000472129 HINFPQ9BQA5 517 aa9.4□□□□□ -0.9
CLTC-204ENST00000472129 RNF225M0QZC1 329 aaPredicted RBP9.39□□□□□ -0.91
CLTC-204ENST00000472129 SLURP2P0DP57 97 aa9.39□□□□□ -0.91
CLTC-204ENST00000472129 UBAP2LQ14157 1087 aaKnown RBP9.39□□□□□ -0.91
CLTC-204ENST00000472129 GAS6Q14393 721 aa9.39□□□□□ -0.91
CLTC-204ENST00000472129 SVOPQ8N4V2 548 aa9.39□□□□□ -0.91
CLTC-204ENST00000472129 GMCL1Q96IK5 515 aa9.39□□□□□ -0.91
CLTC-204ENST00000472129 NOVA2Q9UNW9 492 aaKnown RBP9.39□□□□□ -0.91
CLTC-204ENST00000472129 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
CLTC-204ENST00000472129 CSB-PGBD3P0DP91 1061 aa9.38□□□□□ -0.91
CLTC-204ENST00000472129 PGBD3Q8N328 593 aa9.38□□□□□ -0.91
CLTC-204ENST00000472129 FAM200AQ8TCP9 573 aa9.38□□□□□ -0.91
CLTC-204ENST00000472129 SCG3Q8WXD2 468 aaKnown RBP9.38□□□□□ -0.91
CLTC-204ENST00000472129 ZMIZ1Q9ULJ6 1067 aa9.38□□□□□ -0.91
CLTC-204ENST00000472129 SERTM1A2A2V5 107 aa9.37□□□□□ -0.91
CLTC-204ENST00000472129 SUPT5HO00267 1087 aaKnown RBP9.37□□□□□ -0.91
CLTC-204ENST00000472129 EML1O00423 815 aa9.37□□□□□ -0.91
CLTC-204ENST00000472129 NBPF1Q3BBV0 1214 aa9.37□□□□□ -0.91
CLTC-204ENST00000472129 ARSJQ5FYB0 599 aaPredicted RBP9.37□□□□□ -0.91
CLTC-204ENST00000472129 KLRG1Q96E93 195 aa9.37□□□□□ -0.91
CLTC-204ENST00000472129 CRISPLD1Q9H336 500 aa9.37□□□□□ -0.91
CLTC-204ENST00000472129 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
CLTC-204ENST00000472129 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
CLTC-204ENST00000472129 ARHGEF15O94989 841 aa9.36□□□□□ -0.91
CLTC-204ENST00000472129 PSMA6P60900 246 aaKnown RBP9.36□□□□□ -0.91
CLTC-204ENST00000472129 FOXR1Q6PIV2 292 aa9.36□□□□□ -0.91
CLTC-204ENST00000472129 C1orf216Q8TAB5 229 aa9.36□□□□□ -0.91
CLTC-204ENST00000472129 CHMP7Q8WUX9 453 aaPredicted RBP9.36□□□□□ -0.91
CLTC-204ENST00000472129 ZDHHC3Q9NYG2 299 aa9.36□□□□□ -0.91
CLTC-204ENST00000472129 HCN4Q9Y3Q4 1203 aa9.36□□□□□ -0.91
CLTC-204ENST00000472129 A0A1W2PNR3 127 aa9.35□□□□□ -0.91
CLTC-204ENST00000472129 TATP17735 454 aaPredicted RBP9.35□□□□□ -0.91
CLTC-204ENST00000472129 EFHC2Q5JST6 749 aa9.35□□□□□ -0.91
CLTC-204ENST00000472129 STK32AQ8WU08 396 aa9.35□□□□□ -0.91
CLTC-204ENST00000472129 PBXIP1Q96AQ6 731 aa9.35□□□□□ -0.91
CLTC-204ENST00000472129 ZIC5Q96T25 663 aa9.35□□□□□ -0.91
CLTC-204ENST00000472129 C7orf43Q8WVR3 580 aa9.34□□□□□ -0.91
CLTC-204ENST00000472129 TRERF1Q96PN7 1200 aa9.34□□□□□ -0.91
CLTC-204ENST00000472129 ATG7O95352 703 aa9.33□□□□□ -0.92
CLTC-204ENST00000472129 LBRQ14739 615 aaKnown RBP9.33□□□□□ -0.92
CLTC-204ENST00000472129 POTEAQ6S8J7 498 aa9.33□□□□□ -0.92
CLTC-204ENST00000472129 BICDL1Q6ZP65 573 aa9.33□□□□□ -0.92
CLTC-204ENST00000472129 C2orf49Q9BVC5 232 aaPredicted RBP9.33□□□□□ -0.92
CLTC-204ENST00000472129 ZCCHC2Q9C0B9 1178 aaKnown RBP9.33□□□□□ -0.92
CLTC-204ENST00000472129 BNIP3LO60238 219 aa9.32□□□□□ -0.92
CLTC-204ENST00000472129 IRS1P35568 1242 aa9.32□□□□□ -0.92
CLTC-204ENST00000472129 FAM69CQ0P6D2 419 aa9.32□□□□□ -0.92
CLTC-204ENST00000472129 ELOAQ14241 798 aaKnown RBP9.32□□□□□ -0.92
CLTC-204ENST00000472129 ERICH6Q7L0X2 663 aa9.32□□□□□ -0.92
CLTC-204ENST00000472129 ABHD17AQ96GS6 310 aa9.32□□□□□ -0.92
CLTC-204ENST00000472129 PHACTR1Q9C0D0 580 aa9.32□□□□□ -0.92
CLTC-204ENST00000472129 NLRP8Q86W28 1048 aa9.31□□□□□ -0.92
CLTC-204ENST00000472129 NDFIP2Q9NV92 336 aa9.31□□□□□ -0.92
CLTC-204ENST00000472129 HCN2Q9UL51 889 aa9.31□□□□□ -0.92
CLTC-204ENST00000472129 CHMP3Q9Y3E7 222 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms