RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 RBM42Q9BTD8 480 aaKnown RBP24.29■■□□□ 1.48
SNX4-203ENST00000471751 DDX21Q9NR30 783 aaKnown RBP eCLIP24.29■■□□□ 1.48
SNX4-203ENST00000471751 HYPKQ9NX55 129 aa24.29■■□□□ 1.48
SNX4-203ENST00000471751 SLC27A3Q5K4L6 730 aa24.28■■□□□ 1.48
SNX4-203ENST00000471751 USP16Q9Y5T5 823 aa24.28■■□□□ 1.48
SNX4-203ENST00000471751 LY75O60449 1722 aa24.27■■□□□ 1.48
SNX4-203ENST00000471751 PTPRCP08575 1304 aa24.27■■□□□ 1.48
SNX4-203ENST00000471751 EZH2Q15910 746 aaKnown RBP24.27■■□□□ 1.48
SNX4-203ENST00000471751 SUPT16HQ9Y5B9 1047 aaKnown RBP24.27■■□□□ 1.48
SNX4-203ENST00000471751 SLC4A2P04920 1241 aa24.26■■□□□ 1.47
SNX4-203ENST00000471751 EIF2S2P20042 333 aaKnown RBP24.26■■□□□ 1.47
SNX4-203ENST00000471751 ATP6V1AP38606 617 aa24.26■■□□□ 1.47
SNX4-203ENST00000471751 PSDA5PKW4 1024 aaPredicted RBP24.25■■□□□ 1.47
SNX4-203ENST00000471751 BCAR3O75815 825 aa24.25■■□□□ 1.47
SNX4-203ENST00000471751 RRP1P56182 461 aaKnown RBP24.24■■□□□ 1.47
SNX4-203ENST00000471751 PDE3AQ14432 1141 aa24.24■■□□□ 1.47
SNX4-203ENST00000471751 SLC4A9Q96Q91 983 aa24.24■■□□□ 1.47
SNX4-203ENST00000471751 C5P01031 1676 aa24.24■■□□□ 1.47
SNX4-203ENST00000471751 RGPD3A6NKT7 1758 aaPredicted RBP24.23■■□□□ 1.47
SNX4-203ENST00000471751 RGPD4Q7Z3J3 1758 aa24.23■■□□□ 1.47
SNX4-203ENST00000471751 CYP19A1P11511 503 aaPredicted RBP24.23■■□□□ 1.47
SNX4-203ENST00000471751 RC3H1Q5TC82 1133 aaKnown RBP24.23■■□□□ 1.47
SNX4-203ENST00000471751 ZKSCAN2Q63HK3 967 aa24.23■■□□□ 1.47
SNX4-203ENST00000471751 PDIA6Q15084 440 aa24.22■■□□□ 1.47
SNX4-203ENST00000471751 PTF1AQ7RTS3 328 aa24.22■■□□□ 1.47
SNX4-203ENST00000471751 DNAJC10Q8IXB1 793 aa24.22■■□□□ 1.47
SNX4-203ENST00000471751 API5Q9BZZ5 524 aaKnown RBP24.22■■□□□ 1.47
SNX4-203ENST00000471751 PRAMEF22A3QJZ6 481 aa24.21■■□□□ 1.47
SNX4-203ENST00000471751 TJP1Q07157 1748 aa24.2■■□□□ 1.47
SNX4-203ENST00000471751 ATF7IPQ6VMQ6 1270 aa24.2■■□□□ 1.46
SNX4-203ENST00000471751 CAMKK2Q96RR4 588 aa24.2■■□□□ 1.46
SNX4-203ENST00000471751 CHPF2Q9P2E5 772 aa24.2■■□□□ 1.46
SNX4-203ENST00000471751 CCNL1Q9UK58 526 aaPredicted RBP24.19■■□□□ 1.46
SNX4-203ENST00000471751 NOB1Q9ULX3 412 aaKnown RBP24.19■■□□□ 1.46
SNX4-203ENST00000471751 CNTNAP4Q9C0A0 1308 aa24.19■■□□□ 1.46
SNX4-203ENST00000471751 DDX58O95786 925 aaKnown RBP24.18■■□□□ 1.46
SNX4-203ENST00000471751 IL6STP40189 918 aaPredicted RBP24.18■■□□□ 1.46
SNX4-203ENST00000471751 FLIIQ13045 1269 aa24.18■■□□□ 1.46
SNX4-203ENST00000471751 BCL2L13Q9BXK5 485 aa24.18■■□□□ 1.46
SNX4-203ENST00000471751 COL5A3P25940 1745 aaPredicted RBP24.18■■□□□ 1.46
SNX4-203ENST00000471751 CANXP27824 592 aaKnown RBP24.17■■□□□ 1.46
SNX4-203ENST00000471751 R3HDM1Q15032 1099 aaKnown RBP24.17■■□□□ 1.46
SNX4-203ENST00000471751 LRP10Q7Z4F1 713 aa24.17■■□□□ 1.46
SNX4-203ENST00000471751 SRCAPQ6ZRS2 3230 aa24.16■■□□□ 1.46
SNX4-203ENST00000471751 ITPK1Q13572 414 aa24.16■■□□□ 1.46
SNX4-203ENST00000471751 CCDC87Q9NVE4 849 aa24.16■■□□□ 1.46
SNX4-203ENST00000471751 TNS1Q9HBL0 1735 aaKnown RBP24.16■■□□□ 1.46
SNX4-203ENST00000471751 RREB1Q92766 1687 aa24.16■■□□□ 1.46
SNX4-203ENST00000471751 RGL2O15211 777 aa24.15■■□□□ 1.46
SNX4-203ENST00000471751 ERICH6BQ5W0A0 696 aa24.15■■□□□ 1.46
SNX4-203ENST00000471751 FRAT1Q92837 279 aaPredicted RBP24.15■■□□□ 1.46
SNX4-203ENST00000471751 TAF1LQ8IZX4 1826 aa24.15■■□□□ 1.46
SNX4-203ENST00000471751 NBPF26B4DH59 902 aa24.14■■□□□ 1.46
SNX4-203ENST00000471751 A1BGP04217 495 aa24.14■■□□□ 1.46
SNX4-203ENST00000471751 NBPF14Q5TI25 921 aa24.14■■□□□ 1.46
SNX4-203ENST00000471751 NBPF10Q6P3W6 841 aaKnown RBP24.14■■□□□ 1.46
SNX4-203ENST00000471751 NBPF15Q8N660 670 aa24.14■■□□□ 1.46
SNX4-203ENST00000471751 NECTIN2Q92692 538 aa24.14■■□□□ 1.46
SNX4-203ENST00000471751 NEFLP07196 543 aa24.13■■□□□ 1.45
SNX4-203ENST00000471751 CRKLP46109 303 aaKnown RBP24.13■■□□□ 1.45
SNX4-203ENST00000471751 AAMPQ13685 434 aa24.13■■□□□ 1.45
SNX4-203ENST00000471751 TXNRD1Q16881 649 aa24.13■■□□□ 1.45
SNX4-203ENST00000471751 INTS5Q6P9B9 1019 aaKnown RBP24.13■■□□□ 1.45
SNX4-203ENST00000471751 NPM2Q86SE8 214 aaKnown RBP24.13■■□□□ 1.45
SNX4-203ENST00000471751 DZIP1LQ8IYY4 767 aaKnown RBP24.13■■□□□ 1.45
SNX4-203ENST00000471751 IBTKQ9P2D0 1353 aaPredicted RBP24.13■■□□□ 1.45
SNX4-203ENST00000471751 TRIM27P14373 513 aa24.12■■□□□ 1.45
SNX4-203ENST00000471751 CHMP4BQ9H444 224 aaKnown RBP24.12■■□□□ 1.45
SNX4-203ENST00000471751 A0A087WZG4 1122 aa24.11■■□□□ 1.45
SNX4-203ENST00000471751 TCERG1O14776 1098 aaKnown RBP24.11■■□□□ 1.45
SNX4-203ENST00000471751 EIF5P55010 431 aaKnown RBP24.11■■□□□ 1.45
SNX4-203ENST00000471751 FKBP5Q13451 457 aaPredicted RBP24.11■■□□□ 1.45
SNX4-203ENST00000471751 KSR2Q6VAB6 950 aa24.11■■□□□ 1.45
SNX4-203ENST00000471751 PHAXQ9H814 394 aaKnown RBP24.11■■□□□ 1.45
SNX4-203ENST00000471751 MYH14Q7Z406 1995 aaKnown RBP24.11■■□□□ 1.45
SNX4-203ENST00000471751 RPS6KA4O75676 772 aa24.1■■□□□ 1.45
SNX4-203ENST00000471751 G2E3Q7L622 706 aa24.1■■□□□ 1.45
SNX4-203ENST00000471751 FTSJ3Q8IY81 847 aaKnown RBP24.1■■□□□ 1.45
SNX4-203ENST00000471751 LINC00116Q8NCU8 138 aa24.1■■□□□ 1.45
SNX4-203ENST00000471751 MYL6BP14649 208 aa24.1■■□□□ 1.45
SNX4-203ENST00000471751 PROSER3Q2NL68 480 aa24.1■■□□□ 1.45
SNX4-203ENST00000471751 ANKRD13DQ6ZTN6 518 aa24.1■■□□□ 1.45
SNX4-203ENST00000471751 COPS6Q7L5N1 327 aa24.1■■□□□ 1.45
SNX4-203ENST00000471751 PROM2Q8N271 834 aa24.1■■□□□ 1.45
SNX4-203ENST00000471751 PLBD2Q8NHP8 589 aa24.1■■□□□ 1.45
SNX4-203ENST00000471751 ABCC4O15439 1325 aa24.09■■□□□ 1.45
SNX4-203ENST00000471751 PXDNLA1KZ92 1463 aa24.09■■□□□ 1.45
SNX4-203ENST00000471751 ADRA2BP18089 450 aa24.09■■□□□ 1.45
SNX4-203ENST00000471751 INTS3Q68E01 1043 aaKnown RBP24.09■■□□□ 1.45
SNX4-203ENST00000471751 LRRC4BQ9NT99 713 aa24.09■■□□□ 1.45
SNX4-203ENST00000471751 ZBTB1Q9Y2K1 713 aa24.09■■□□□ 1.45
SNX4-203ENST00000471751 ERVV-1B6SEH8 477 aa24.08■■□□□ 1.44
SNX4-203ENST00000471751 PLIN1O60240 522 aa24.08■■□□□ 1.44
SNX4-203ENST00000471751 CCT4P50991 539 aaKnown RBP24.08■■□□□ 1.44
SNX4-203ENST00000471751 XAGE3Q8WTP9 111 aa24.08■■□□□ 1.44
SNX4-203ENST00000471751 DNAAF4Q8WXU2 420 aa24.07■■□□□ 1.44
SNX4-203ENST00000471751 C4BP0C0L5 1744 aa24.06■■□□□ 1.44
SNX4-203ENST00000471751 PI4KAP2A4QPH2 592 aa24.06■■□□□ 1.44
SNX4-203ENST00000471751 PI4KAP1Q8N8J0 262 aa24.06■■□□□ 1.44
SNX4-203ENST00000471751 RTCBQ9Y3I0 505 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms